| advance_to_next_pose_segment() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| apply_current_pose_segment(core::pose::Pose &pose) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| apply_current_pose_segment(core::pose::Pose &pose, core::pose::Pose &import_pose, bool const check_sequence_matches, bool const align_pose_to_import_pose=false) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| backbone_only_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| check_sequence(core::pose::Pose const &pose, core::pose::Pose const &import_pose) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| cleanup_pose(core::pose::Pose &import_pose) const | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| compute_size() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| copy_next_pose_segment(core::pose::Pose &pose) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| copy_next_pose_segment(core::pose::Pose &pose, core::pose::Pose &import_pose, bool const check_sequence_matches, bool const align_pose_to_import_pose=false) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| full_to_sub() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| full_to_sub_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| has_another_pose() const | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| import_pose_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| initialize_defaults() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| input_res() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| input_res_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| InputStreamWithResidueInfo(core::import_pose::pose_stream::PoseInputStreamOP pose_input_stream, utility::vector1< core::Size > const &input_res, utility::vector1< core::Size > const &slice_res) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| InputStreamWithResidueInfo(core::import_pose::pose_stream::PoseInputStreamOP pose_input_stream, utility::vector1< core::Size > const &input_res) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| pose_input_stream() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| pose_input_stream_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| reset() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| rsd_set_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| set_backbone_only(bool const setting) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| set_full_to_sub(std::map< core::Size, core::Size > const &full_to_sub) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| set_rsd_set(core::chemical::ResidueTypeSetCAP &rsd_set) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| set_slice_res(utility::vector1< core::Size > const &slice_res) | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| slice_res() | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |
| slice_res_ | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | private |
| ~InputStreamWithResidueInfo() override | protocols::stepwise::modeler::protein::InputStreamWithResidueInfo | |