OptimizeProteinEmbeddingMover.cc File Reference

#include <protocols/membrane/OptimizeProteinEmbeddingMover.hh>
#include <protocols/membrane/OptimizeProteinEmbeddingMoverCreator.hh>
#include <protocols/moves/Mover.hh>
#include <core/conformation/Conformation.hh>
#include <core/conformation/membrane/MembraneInfo.hh>
#include <protocols/membrane/geometry/EmbeddingDef.hh>
#include <protocols/membrane/AddMembraneMover.hh>
#include <protocols/membrane/SetMembranePositionMover.hh>
#include <protocols/membrane/OptimizeMembranePositionMover.hh>
#include <protocols/membrane/TransformIntoMembraneMover.hh>
#include <core/kinematics/FoldTree.hh>
#include <protocols/membrane/util.hh>
#include <core/pose/Pose.hh>
#include <core/pose/util.hh>
#include <core/types.hh>
#include <protocols/rosetta_scripts/util.hh>
#include <protocols/filters/Filter.hh>
#include <numeric/xyzVector.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/mp.OptionKeys.gen.hh>
#include <utility/tag/Tag.hh>
#include <basic/datacache/DataMap.hh>
#include <basic/Tracer.hh>
#include <cstdlib>
#include <utility/tag/XMLSchemaGeneration.hh>
#include <protocols/moves/mover_schemas.hh>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::membrane

Macros
#define	INCLUDED_protocols_membrane_OptimizeProteinEmbeddingMover_cc
	Optimizes the protein embedding in the membrane. More...

Functions
static basic::Tracer	TR ("protocols.membrane.OptimizeProteinEmbeddingMover")

Macro Definition Documentation

#define INCLUDED_protocols_membrane_OptimizeProteinEmbeddingMover_cc

Optimizes the protein embedding in the membrane.

Optimizes the protein embedding in the membrane given the smooth high-res score function; transforms the protein into the membrane, optimizes the membrane position (flexible), and uses the optimized embedding to reposition the protein in the membrane

Author

JKLeman (julia.nosp@m..koe.nosp@m.hler1.nosp@m.982@.nosp@m.gmail.nosp@m..com)

Function Documentation

static basic::Tracer TR ( "protocols.membrane.OptimizeProteinEmbeddingMover"  )

static