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protocols::recces::options::RECCES_Options Member List

This is the complete list of members for protocols::recces::options::RECCES_Options, including all inherited members.

a_form_range() const protocols::recces::options::RECCES_Optionsinline
a_form_range_protocols::recces::options::RECCES_Optionsprivate
accept_no_op_moves() const protocols::recces::options::RECCES_Optionsinline
accept_no_op_moves_protocols::recces::options::RECCES_Optionsprivate
angle_range_bb() const protocols::recces::options::RECCES_Optionsinline
angle_range_bb_protocols::recces::options::RECCES_Optionsprivate
angle_range_chi() const protocols::recces::options::RECCES_Optionsinline
angle_range_chi_protocols::recces::options::RECCES_Optionsprivate
angle_range_free_bb() const protocols::recces::options::RECCES_Optionsinline
angle_range_free_bb_protocols::recces::options::RECCES_Optionsprivate
angle_range_free_chi() const protocols::recces::options::RECCES_Optionsinline
angle_range_free_chi_protocols::recces::options::RECCES_Optionsprivate
base_pair_rmsd_cutoff() const protocols::recces::options::RECCES_Optionsinline
base_pair_rmsd_cutoff_protocols::recces::options::RECCES_Optionsprivate
base_pair_rotation_mag() const protocols::recces::options::RECCES_Optionsinline
base_pair_rotation_mag_protocols::recces::options::RECCES_Optionsprivate
base_pair_translation_mag() const protocols::recces::options::RECCES_Optionsinline
base_pair_translation_mag_protocols::recces::options::RECCES_Optionsprivate
bb_stdev() const protocols::recces::options::RECCES_Optionsinline
bb_stdev_protocols::recces::options::RECCES_Optionsprivate
blank_score_terms() const protocols::recces::options::RECCES_Optionsinline
blank_score_terms_protocols::recces::options::RECCES_Optionsprivate
block_stack() const protocols::recces::options::RECCES_Optionsinline
block_stack_protocols::recces::options::RECCES_Optionsprivate
chi_stdev() const protocols::recces::options::RECCES_Optionsinline
chi_stdev_protocols::recces::options::RECCES_Optionsprivate
clone() const protocols::recces::options::RECCES_Options
dump_freq() const protocols::recces::options::RECCES_Optionsinline
dump_freq_protocols::recces::options::RECCES_Optionsprivate
dump_pdb() const protocols::recces::options::RECCES_Optionsinline
dump_pdb_protocols::recces::options::RECCES_Optionsprivate
dump_silent() const protocols::recces::options::RECCES_Optionsinline
dump_silent_protocols::recces::options::RECCES_Optionsprivate
free_residues() const protocols::recces::options::RECCES_Optionsinline
free_residues_protocols::recces::options::RECCES_Optionsprivate
histogram_max() const protocols::recces::options::RECCES_Optionsinline
histogram_max_protocols::recces::options::RECCES_Optionsprivate
histogram_min() const protocols::recces::options::RECCES_Optionsinline
histogram_min_protocols::recces::options::RECCES_Optionsprivate
histogram_spacing() const protocols::recces::options::RECCES_Optionsinline
histogram_spacing_protocols::recces::options::RECCES_Optionsprivate
infile() const protocols::recces::options::RECCES_Optionsinline
infile_protocols::recces::options::RECCES_Optionsprivate
initialize_from_command_line()protocols::recces::options::RECCES_Options
legacy_turner_mode() const protocols::recces::options::RECCES_Optionsinline
legacy_turner_mode_protocols::recces::options::RECCES_Optionsprivate
loop_residues() const protocols::recces::options::RECCES_Optionsinline
loop_residues_protocols::recces::options::RECCES_Optionsprivate
n_cycle() const protocols::recces::options::RECCES_Optionsinline
n_cycle_protocols::recces::options::RECCES_Optionsprivate
n_dump() const protocols::recces::options::RECCES_Optionsinline
n_dump_protocols::recces::options::RECCES_Optionsprivate
out_prefix() const protocols::recces::options::RECCES_Optionsinline
out_prefix_protocols::recces::options::RECCES_Optionsprivate
out_torsions() const protocols::recces::options::RECCES_Optionsinline
out_torsions_protocols::recces::options::RECCES_Optionsprivate
output_simple_text_files() const protocols::recces::options::RECCES_Optionsinline
output_simple_text_files_protocols::recces::options::RECCES_Optionsprivate
parse_my_tag(utility::tag::TagCOP)protocols::recces::options::RECCES_Optionsinlinevirtual
prefix_each_output_pdb() const protocols::recces::options::RECCES_Optionsinline
prefix_each_output_pdb_protocols::recces::options::RECCES_Optionsprivate
RECCES_Options()protocols::recces::options::RECCES_Options
rna_secstruct() const protocols::recces::options::RECCES_Optionsinline
rna_secstruct_protocols::recces::options::RECCES_Optionsprivate
sample_jump() const protocols::recces::options::RECCES_Optionsinline
sample_jump_protocols::recces::options::RECCES_Optionsprivate
sample_residues() const protocols::recces::options::RECCES_Optionsinline
sample_residues_protocols::recces::options::RECCES_Optionsprivate
save_scores() const protocols::recces::options::RECCES_Optionsinline
save_scores_protocols::recces::options::RECCES_Optionsprivate
seq1() const protocols::recces::options::RECCES_Optionsinline
seq1_protocols::recces::options::RECCES_Optionsprivate
seq2() const protocols::recces::options::RECCES_Optionsinline
seq2_protocols::recces::options::RECCES_Optionsprivate
set_a_form_range(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_accept_no_op_moves(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_angle_range_bb(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_angle_range_chi(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_angle_range_free_bb(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_angle_range_free_chi(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_base_pair_rmsd_cutoff(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_base_pair_rotation_mag(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_base_pair_translation_mag(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_bb_stdev(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_blank_score_terms(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_block_stack(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_chi_stdev(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_dump_freq(core::Size const &setting)protocols::recces::options::RECCES_Optionsinline
set_dump_pdb(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_dump_silent(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_free_residues(utility::vector1< core::Size > const &setting)protocols::recces::options::RECCES_Optionsinline
set_histogram_max(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_histogram_min(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_histogram_spacing(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_infile(std::string const &setting)protocols::recces::options::RECCES_Optionsinline
set_legacy_turner_mode(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_loop_residues(utility::vector1< core::Size > const &setting)protocols::recces::options::RECCES_Optionsinline
set_n_cycle(core::Size const &setting)protocols::recces::options::RECCES_Optionsinline
set_n_dump(core::Size const &setting)protocols::recces::options::RECCES_Optionsinline
set_out_prefix(std::string const &setting)protocols::recces::options::RECCES_Optionsinline
set_out_torsions(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_output_simple_text_files(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_prefix_each_output_pdb(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_rna_secstruct(core::pose::rna::RNA_SecStruct const &setting)protocols::recces::options::RECCES_Optionsinline
set_sample_jump(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_sample_residues(utility::vector1< core::Size > const &setting)protocols::recces::options::RECCES_Optionsinline
set_save_scores(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_seq1(std::string const &setting)protocols::recces::options::RECCES_Optionsinline
set_seq2(std::string const &setting)protocols::recces::options::RECCES_Optionsinline
set_setup_base_pair_constraints(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_show_more_pose_scores(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_silent_file(std::string const &setting)protocols::recces::options::RECCES_Optionsinline
set_skip_last_accept(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_st_weights(utility::vector1< core::Real > const &setting)protocols::recces::options::RECCES_Optionsinline
set_standard_bb_stdev(core::Real const &setting)protocols::recces::options::RECCES_Optionsinline
set_suppress_sampler_display(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_temperatures(utility::vector1< core::Real > const &setting)protocols::recces::options::RECCES_Optionsinline
set_thermal_sampler_mode(bool const &setting)protocols::recces::options::RECCES_Optionsinline
set_xyz_file(std::string const &setting)protocols::recces::options::RECCES_Optionsinline
setup_base_pair_constraints() const protocols::recces::options::RECCES_Optionsinline
setup_base_pair_constraints_protocols::recces::options::RECCES_Optionsprivate
show_more_pose_scores() const protocols::recces::options::RECCES_Optionsinline
show_more_pose_scores_protocols::recces::options::RECCES_Optionsprivate
silent_file() const protocols::recces::options::RECCES_Optionsinline
silent_file_protocols::recces::options::RECCES_Optionsprivate
skip_last_accept() const protocols::recces::options::RECCES_Optionsinline
skip_last_accept_protocols::recces::options::RECCES_Optionsprivate
st_weights() const protocols::recces::options::RECCES_Optionsinline
st_weights_protocols::recces::options::RECCES_Optionsprivate
standard_bb_stdev() const protocols::recces::options::RECCES_Optionsinline
standard_bb_stdev_protocols::recces::options::RECCES_Optionsprivate
suppress_sampler_display() const protocols::recces::options::RECCES_Optionsinline
suppress_sampler_display_protocols::recces::options::RECCES_Optionsprivate
temperatures() const protocols::recces::options::RECCES_Optionsinline
temperatures_protocols::recces::options::RECCES_Optionsprivate
thermal_sampler_mode() const protocols::recces::options::RECCES_Optionsinline
thermal_sampler_mode_protocols::recces::options::RECCES_Optionsprivate
type() const protocols::recces::options::RECCES_Optionsinlinevirtual
xyz_file() const protocols::recces::options::RECCES_Optionsinline
xyz_file_protocols::recces::options::RECCES_Optionsprivate
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