A TaskOperation that accepts a movemap and restricts chi that are false to either packing or design. Does not turn anything on, just like the rest of the RestrictTo operations. More...

#include <RestrictToMoveMapChiOperation.hh>

Inheritance diagram for protocols::task_operations::RestrictToMoveMapChiOperation:

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Public Types
typedef core::pack::task::operation::TaskOperation	parent

Public Types inherited from core::pack::task::operation::TaskOperation
typedef utility::tag::TagCOP	TagCOP

typedef basic::datacache::DataMap	DataMap

typedef pose::Pose	Pose

Public Member Functions
	RestrictToMoveMapChiOperation ()

	RestrictToMoveMapChiOperation (core::kinematics::MoveMapCOP movemap)

	~RestrictToMoveMapChiOperation () override

	RestrictToMoveMapChiOperation (RestrictToMoveMapChiOperation const &src)

void	set_movemap (core::kinematics::MoveMapCOP movemap)

void	set_design (bool setting)
	Set residues from movemap to designable. Default false. More...

void	set_include_neighbors (bool setting)
	Set to use neighbor residues in vacinity of movemap chi residues for packing. Default False. More...

void	set_cutoff_distance (core::Real cutoff)
	Cutoff distance for neighbor detection. Default is 10 A. More...

core::pack::task::operation::TaskOperationOP	clone () const override
	Create another task operation of the type matching the most-derived version of the class. More...

void	apply (Pose const &pose, core::pack::task::PackerTask &task) const override
	Change a packer task in some way. The input pose is the one to which the input task will be later applied. More...

Public Member Functions inherited from core::pack::task::operation::TaskOperation
	~TaskOperation () override

virtual void	parse_tag (TagCOP, DataMap &)
	Used to parse an xml-like tag to load parameters and properties. More...

virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &xsd)

static std::string	keyname ()

Private Member Functions
void	init ()

void	init_for_equal_operator_and_copy_constructor (RestrictToMoveMapChiOperation &lhs, RestrictToMoveMapChiOperation const &rhs)

Private Attributes
core::kinematics::MoveMapCOP	movemap_

bool	design_

bool	include_neighbors_

bool	movemap_set_

core::Real	cutoff_

Detailed Description

A TaskOperation that accepts a movemap and restricts chi that are false to either packing or design. Does not turn anything on, just like the rest of the RestrictTo operations.

Member Typedef Documentation

typedef core::pack::task::operation::TaskOperation protocols::task_operations::RestrictToMoveMapChiOperation::parent

Constructor & Destructor Documentation

protocols::task_operations::RestrictToMoveMapChiOperation::RestrictToMoveMapChiOperation ( )

References init(), and movemap_set_.

protocols::task_operations::RestrictToMoveMapChiOperation::RestrictToMoveMapChiOperation ( core::kinematics::MoveMapCOP movemap )

References init(), movemap_, and movemap_set_.

protocols::task_operations::RestrictToMoveMapChiOperation::~RestrictToMoveMapChiOperation ( )

overridedefault

protocols::task_operations::RestrictToMoveMapChiOperation::RestrictToMoveMapChiOperation ( RestrictToMoveMapChiOperation const & src )

References init_for_equal_operator_and_copy_constructor().

Member Function Documentation

void protocols::task_operations::RestrictToMoveMapChiOperation::apply	(	Pose const &	,
		core::pack::task::PackerTask &
	)		const

overridevirtual

Change a packer task in some way. The input pose is the one to which the input task will be later applied.

Implements core::pack::task::operation::TaskOperation.

References core::pack::task::operation::RestrictResidueToRepacking::apply(), core::pack::task::operation::PreventRepacking::apply(), cutoff_, design_, core::kinematics::distance(), include_neighbors_, core::pack::task::operation::RestrictResidueToRepacking::include_residue(), core::pack::task::operation::PreventRepacking::include_residue(), movemap_, movemap_set_, core::conformation::Residue::nbr_atom(), core::pose::Pose::residue(), core::pose::Pose::size(), and core::conformation::Residue::xyz().

TaskOperationOP protocols::task_operations::RestrictToMoveMapChiOperation::clone ( ) const

overridevirtual

Create another task operation of the type matching the most-derived version of the class.

Implements core::pack::task::operation::TaskOperation.

void protocols::task_operations::RestrictToMoveMapChiOperation::init ( void )

private

References set_cutoff_distance(), set_design(), and set_include_neighbors().

Referenced by RestrictToMoveMapChiOperation().

void protocols::task_operations::RestrictToMoveMapChiOperation::init_for_equal_operator_and_copy_constructor	(	RestrictToMoveMapChiOperation &	lhs,
		RestrictToMoveMapChiOperation const &	rhs
	)

private

References cutoff_, design_, include_neighbors_, movemap_, and movemap_set_.

Referenced by RestrictToMoveMapChiOperation().

static std::string protocols::task_operations::RestrictToMoveMapChiOperation::keyname ( )

inlinestatic

Referenced by provide_xml_schema().

void protocols::task_operations::RestrictToMoveMapChiOperation::provide_xml_schema ( utility::tag::XMLSchemaDefinition & xsd )

static

References keyname(), and core::pack::task::operation::task_op_schema_empty().

void protocols::task_operations::RestrictToMoveMapChiOperation::set_cutoff_distance ( core::Real cutoff )

Cutoff distance for neighbor detection. Default is 10 A.

References cutoff_.

Referenced by init().

void protocols::task_operations::RestrictToMoveMapChiOperation::set_design ( bool setting )

Set residues from movemap to designable. Default false.

References design_.

Referenced by init().

void protocols::task_operations::RestrictToMoveMapChiOperation::set_include_neighbors ( bool setting )

Set to use neighbor residues in vacinity of movemap chi residues for packing. Default False.

References include_neighbors_.

Referenced by init().

void protocols::task_operations::RestrictToMoveMapChiOperation::set_movemap ( core::kinematics::MoveMapCOP movemap )

References movemap_, and movemap_set_.

Member Data Documentation

core::Real protocols::task_operations::RestrictToMoveMapChiOperation::cutoff_

private

Referenced by apply(), init_for_equal_operator_and_copy_constructor(), and set_cutoff_distance().

bool protocols::task_operations::RestrictToMoveMapChiOperation::design_

private

Referenced by apply(), init_for_equal_operator_and_copy_constructor(), and set_design().

bool protocols::task_operations::RestrictToMoveMapChiOperation::include_neighbors_

private

Referenced by apply(), init_for_equal_operator_and_copy_constructor(), and set_include_neighbors().

core::kinematics::MoveMapCOP protocols::task_operations::RestrictToMoveMapChiOperation::movemap_

private

Referenced by apply(), init_for_equal_operator_and_copy_constructor(), RestrictToMoveMapChiOperation(), and set_movemap().

bool protocols::task_operations::RestrictToMoveMapChiOperation::movemap_set_

private

Referenced by apply(), init_for_equal_operator_and_copy_constructor(), RestrictToMoveMapChiOperation(), and set_movemap().

The documentation for this class was generated from the following files:

src/protocols/task_operations/RestrictToMoveMapChiOperation.hh
src/protocols/task_operations/RestrictToMoveMapChiOperation.cc

Public Types

Public Member Functions

Static Public Member Functions

Private Member Functions

Private Attributes

Detailed Description

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation