protocols::residue_selectors::TaskSelector Class Reference

The TaskSelector returns a ResidueSubset, i.e. a utility::vector1< bool > containing 'true' for residue positions which are located near the given selected residues in primary sequence space. More...

#include <TaskSelector.hh>

Inheritance diagram for protocols::residue_selectors::TaskSelector:

Public Member Functions
	TaskSelector ()
	TaskSelector (core::pack::task::TaskFactoryOP tf, bool const select_designable, bool const select_packable, bool const select_fixed)
core::select::residue_selector::ResidueSelectorOP	clone () const override
	Clone operator. More...
	~TaskSelector () override
core::select::residue_selector::ResidueSubset	apply (core::pose::Pose const &pose) const override
	Return a ResidueSubset indicating a selection of Residues from the input Pose; the ResidueSubset is an array of booleans where a value of "true" for position i indicates that residue i is a part of the selected subset – and a value of "false" would indicate that it is not. More...
void	parse_my_tag (utility::tag::TagCOP tag, basic::datacache::DataMap &) override
	Initialize any data members of this instance from an input tag and a DataMap object. More...
std::string	get_name () const override
void	set_task_factory (core::pack::task::TaskFactoryOP tf)
void	set_select_designable (bool const sel_designable)
void	set_select_packable (bool const sel_packable)
void	set_select_fixed (bool const sel_fixed)
Public Member Functions inherited from core::select::residue_selector::ResidueSelector
	ResidueSelector ()
	Constructor. More...
	~ResidueSelector () override
	Destructor. More...
virtual void	provide_citation_info (basic::citation_manager::CitationCollectionList &) const
	Provide citations to the passed CitationCollectionList Subclasses should add the info for themselves and any other classes they use. More...

Static Public Member Functions
static void	provide_xml_schema (utility::tag::XMLSchemaDefinition &)
static std::string	class_name ()

Private Attributes
core::pack::task::TaskFactoryOP	tf_
bool	select_designable_
bool	select_packable_
bool	select_fixed_

Detailed Description

The TaskSelector returns a ResidueSubset, i.e. a utility::vector1< bool > containing 'true' for residue positions which are located near the given selected residues in primary sequence space.

Constructor & Destructor Documentation

protocols::residue_selectors::TaskSelector::TaskSelector

(

)

protocols::residue_selectors::TaskSelector::TaskSelector	(	core::pack::task::TaskFactoryOP	tf,
		bool const	select_designable,
		bool const	select_packable,
		bool const	select_fixed
	)

protocols::residue_selectors::TaskSelector::~TaskSelector ( )

overridedefault

Member Function Documentation

core::select::residue_selector::ResidueSubset protocols::residue_selectors::TaskSelector::apply ( core::pose::Pose const &  pose ) const

overridevirtual

Return a ResidueSubset indicating a selection of Residues from the input Pose; the ResidueSubset is an array of booleans where a value of "true" for position i indicates that residue i is a part of the selected subset – and a value of "false" would indicate that it is not.

Implements core::select::residue_selector::ResidueSelector.

References protocols::residue_selectors::quit_no_tf(), select_designable_, select_fixed_, select_packable_, tf_, and protocols::residue_selectors::TR().

std::string protocols::residue_selectors::TaskSelector::class_name ( )

static

Referenced by get_name(), protocols::residue_selectors::TaskSelectorCreator::keyname(), and provide_xml_schema().

core::select::residue_selector::ResidueSelectorOP protocols::residue_selectors::TaskSelector::clone ( ) const

overridevirtual

Clone operator.

Copy this object and return an owning pointer to the new object.

Implements core::select::residue_selector::ResidueSelector.

std::string protocols::residue_selectors::TaskSelector::get_name ( ) const

overridevirtual

Implements core::select::residue_selector::ResidueSelector.

References class_name().

void protocols::residue_selectors::TaskSelector::parse_my_tag ( utility::tag::TagCOP  tag, basic::datacache::DataMap &  datacache  )

overridevirtual

Initialize any data members of this instance from an input tag and a DataMap object.

Noop implementation in the base class in the case that a derived class has no need to read data from an input tag

Reimplemented from core::select::residue_selector::ResidueSelector.

References protocols::residue_selectors::quit_no_tf(), select_designable_, select_fixed_, select_packable_, set_select_designable(), set_select_fixed(), set_select_packable(), set_task_factory(), and protocols::residue_selectors::TR().

void protocols::residue_selectors::TaskSelector::provide_xml_schema ( utility::tag::XMLSchemaDefinition &  xsd )

static

References class_name(), and core::select::residue_selector::xsd_type_definition_w_attributes().

Referenced by protocols::residue_selectors::TaskSelectorCreator::provide_xml_schema().

void protocols::residue_selectors::TaskSelector::set_select_designable

(

bool const

sel_designable

)

References select_designable_.

Referenced by parse_my_tag().

void protocols::residue_selectors::TaskSelector::set_select_fixed

(

bool const

sel_fixed

)

References select_fixed_.

Referenced by parse_my_tag().

void protocols::residue_selectors::TaskSelector::set_select_packable

(

bool const

sel_packable

)

References select_packable_.

Referenced by parse_my_tag().

void protocols::residue_selectors::TaskSelector::set_task_factory

(

core::pack::task::TaskFactoryOP

tf

)

References tf_.

Referenced by parse_my_tag().

Member Data Documentation

bool protocols::residue_selectors::TaskSelector::select_designable_

private

Referenced by apply(), parse_my_tag(), and set_select_designable().

bool protocols::residue_selectors::TaskSelector::select_fixed_

private

Referenced by apply(), parse_my_tag(), and set_select_fixed().

bool protocols::residue_selectors::TaskSelector::select_packable_

private

Referenced by apply(), parse_my_tag(), and set_select_packable().

core::pack::task::TaskFactoryOP protocols::residue_selectors::TaskSelector::tf_

private

Referenced by apply(), and set_task_factory().

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The documentation for this class was generated from the following files:

• src/protocols/residue_selectors/TaskSelector.hh
• src/protocols/residue_selectors/TaskSelector.cc