| add_additional_task_operaration(core::pack::task::operation::TaskOperationOP task_operation) | protocols::docking::DockingHighRes | |
| apply(core::pose::Pose &pose) override | protocols::docking::DockingHighResLegacy | virtual |
| bb_ | protocols::docking::DockingHighResLegacy | private |
| chi_ | protocols::docking::DockingHighResLegacy | private |
| clear_info() | protocols::moves::Mover | inlinevirtual |
| clone() const override | protocols::docking::DockingHighResLegacy | virtual |
| create() | protocols::moves::Mover | virtual |
| define_loops(core::pose::Pose const &pose, loops::LoopsOP loop_set, Real &interface_dist) | protocols::docking::DockingHighResLegacy | |
| design(bool const des) | protocols::docking::DockingHighResLegacy | |
| design() const | protocols::docking::DockingHighResLegacy | |
| design_ | protocols::docking::DockingHighResLegacy | private |
| docking_highres_protocol_mover_ | protocols::docking::DockingHighResLegacy | private |
| DockingHighRes() | protocols::docking::DockingHighRes | |
| DockingHighRes(core::Size const rb_jump) | protocols::docking::DockingHighRes | |
| DockingHighRes(core::Size const rb_jump, core::scoring::ScoreFunctionOP scorefxn) | protocols::docking::DockingHighRes | |
| DockingHighRes(core::Size const rb_jump, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockingHighRes | |
| DockingHighRes(DockJumps const movable_jumps, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockingHighRes | |
| DockingHighRes(DockingHighRes const &old_instance) | protocols::docking::DockingHighRes | |
| DockingHighResLegacy() | protocols::docking::DockingHighResLegacy | |
| DockingHighResLegacy(int rb_jump, core::scoring::ScoreFunctionOP scorefxn) | protocols::docking::DockingHighResLegacy | |
| DockingHighResLegacy(int rb_jump, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockingHighResLegacy | |
| DockingHighResLegacy(DockJumps const movable_jumps, core::scoring::ScoreFunctionOP scorefxn, core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockingHighResLegacy | |
| fresh_instance() const | protocols::moves::Mover | virtual |
| get_additional_output() | protocols::moves::Mover | virtual |
| get_additional_task_operarations() | protocols::docking::DockingHighRes | |
| get_current_job() const | protocols::moves::Mover | |
| get_current_tag() const | protocols::moves::Mover | inline |
| get_input_pose() const | protocols::moves::Mover | |
| get_last_move_status() const | protocols::moves::Mover | |
| get_mc() | protocols::docking::DockingHighResLegacy | |
| get_name() const override | protocols::docking::DockingHighResLegacy | virtual |
| get_native_pose() const | protocols::moves::Mover | |
| get_partners() const | protocols::docking::DockingHighRes | inline |
| get_rot_magnitude() | protocols::docking::DockingHighResLegacy | inline |
| get_self_ptr() const | protocols::moves::Mover | inline |
| get_self_ptr() | protocols::moves::Mover | inline |
| get_self_weak_ptr() const | protocols::moves::Mover | inline |
| get_self_weak_ptr() | protocols::moves::Mover | inline |
| get_trans_magnitude() | protocols::docking::DockingHighResLegacy | inline |
| get_type() const | protocols::moves::Mover | inline |
| ignore_default_task() | protocols::docking::DockingHighRes | |
| info() | protocols::moves::Mover | inlinevirtual |
| info() const | protocols::moves::Mover | inlinevirtual |
| init_task_factory_ | protocols::docking::DockingHighResLegacy | private |
| last_proposal_density_ratio() | protocols::moves::Mover | inlinevirtual |
| mc_ | protocols::docking::DockingHighResLegacy | private |
| min_tolerance_ | protocols::docking::DockingHighResLegacy | private |
| min_type_ | protocols::docking::DockingHighResLegacy | private |
| movable_jumps() | protocols::docking::DockingHighRes | inline |
| movable_jumps() const | protocols::docking::DockingHighRes | inline |
| movemap_ | protocols::docking::DockingHighResLegacy | private |
| Mover() | protocols::moves::Mover | |
| Mover(std::string const &type_name) | protocols::moves::Mover | |
| mover_name() | protocols::docking::DockingHighResLegacy | static |
| name() | protocols::moves::Mover | inlinestatic |
| nb_list_ | protocols::docking::DockingHighResLegacy | private |
| parse_my_tag(TagCOP tag, basic::datacache::DataMap &data) | protocols::moves::Mover | virtual |
| partners() | protocols::docking::DockingHighRes | inline |
| Pose typedef | protocols::moves::Mover | |
| PoseCOP typedef | protocols::moves::Mover | |
| provide_citation_info(basic::citation_manager::CitationCollectionList &) const | protocols::moves::Mover | virtual |
| provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd) | protocols::docking::DockingHighResLegacy | static |
| Real typedef | protocols::docking::DockingHighResLegacy | private |
| register_options() | protocols::moves::Mover | inlinestatic |
| reinitialize_for_each_job() const | protocols::moves::Mover | virtual |
| reinitialize_for_new_input() const | protocols::moves::Mover | virtual |
| repack_period_ | protocols::docking::DockingHighResLegacy | private |
| repack_switch_ | protocols::docking::DockingHighResLegacy | private |
| reset_status() | protocols::moves::Mover | |
| rot_magnitude_ | protocols::docking::DockingHighResLegacy | private |
| rt_min() | protocols::docking::DockingHighResLegacy | inline |
| rt_min_ | protocols::docking::DockingHighResLegacy | private |
| sc_min() | protocols::docking::DockingHighResLegacy | inline |
| sc_min_ | protocols::docking::DockingHighResLegacy | private |
| scorefxn() const | protocols::docking::DockingHighRes | |
| scorefxn_pack() const | protocols::docking::DockingHighRes | |
| set_additional_task_operarations(utility::vector1< core::pack::task::operation::TaskOperationOP > additional_task_operations) | protocols::docking::DockingHighRes | |
| set_current_job(protocols::jobdist::BasicJobCOP job) | protocols::moves::Mover | |
| set_current_tag(std::string const &new_tag) | protocols::moves::Mover | inlinevirtual |
| set_default(core::pose::Pose &pose) | protocols::docking::DockingHighResLegacy | |
| set_dock_mcm_protocol(core::pose::Pose &pose) | protocols::docking::DockingHighResLegacy | |
| set_dock_min_protocol() | protocols::docking::DockingHighResLegacy | |
| set_dock_ppk_protocol(core::pose::Pose &pose) | protocols::docking::DockingHighResLegacy | |
| set_ignore_default_task(bool ignore_default_task) | protocols::docking::DockingHighRes | |
| set_input_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_interface_definition_task_operation(protocols::simple_task_operations::InterfaceTaskOperationOP interface_definition) | protocols::docking::DockingHighRes | |
| set_last_move_status(MoverStatus status) | protocols::moves::Mover | protected |
| set_min_type(std::string min_type_in) | protocols::docking::DockingHighResLegacy | |
| set_movable_jumps(DockJumps movable_jumps) | protocols::docking::DockingHighRes | inline |
| set_move_map(core::kinematics::MoveMapOP movemap_in) | protocols::docking::DockingHighResLegacy | |
| set_native_pose(PoseCOP pose) | protocols::moves::Mover | virtual |
| set_partners(std::string partners) | protocols::docking::DockingHighRes | inline |
| set_protocol(core::pose::Pose &pose) | protocols::docking::DockingHighResLegacy | |
| set_repack(bool repack_switch) | protocols::docking::DockingHighResLegacy | |
| set_rot_magnitude(core::Real rot_magnitude) | protocols::docking::DockingHighResLegacy | |
| set_rt_min(bool rt_min) | protocols::docking::DockingHighResLegacy | inline |
| set_sc_min(bool sc_min) | protocols::docking::DockingHighResLegacy | inline |
| set_scorefxn(core::scoring::ScoreFunctionOP scorefxn) | protocols::docking::DockingHighRes | |
| set_scorefxn_pack(core::scoring::ScoreFunctionOP scorefxn_pack) | protocols::docking::DockingHighRes | |
| set_task_factory(core::pack::task::TaskFactoryOP task) | protocols::docking::DockingHighResLegacy | virtual |
| protocols::docking::DockingHighRes::set_task_factory(core::pack::task::TaskFactoryCOP tf) | protocols::docking::DockingHighRes | |
| set_trans_magnitude(core::Real trans_magnitude) | protocols::docking::DockingHighResLegacy | |
| set_type(std::string const &setting) | protocols::moves::Mover | inline |
| setup_packing(core::pose::Pose &pose) | protocols::docking::DockingHighResLegacy | private |
| show(std::ostream &output=std::cout) const | protocols::moves::Mover | virtual |
| Strings typedef | protocols::moves::Mover | |
| TagCOP typedef | protocols::moves::Mover | |
| task_factory() | protocols::docking::DockingHighRes | |
| temperature_ | protocols::docking::DockingHighResLegacy | private |
| test_move(Pose &pose) | protocols::moves::Mover | inlinevirtual |
| tf2() | protocols::docking::DockingHighRes | protected |
| trans_magnitude_ | protocols::docking::DockingHighResLegacy | private |
| type(const std::string &type_in) | protocols::moves::Mover | inline |
| type() const | protocols::moves::Mover | inline |
| ~DockingHighRes() override | protocols::docking::DockingHighRes | |
| ~DockingHighResLegacy() override | protocols::docking::DockingHighResLegacy | |
1.8.7