| add_property_i(std::string const &property) | core::scoring::bin_transitions::BinTransitionData | inline |
| add_property_iplus1(std::string const &property) | core::scoring::bin_transitions::BinTransitionData | inline |
| add_res_identity_i(std::string const &resname) | core::scoring::bin_transitions::BinTransitionData | inline |
| add_res_identity_iplus1(std::string const &resname) | core::scoring::bin_transitions::BinTransitionData | inline |
| bin_boundaries_i(core::Size const n, core::Size const m) const | core::scoring::bin_transitions::BinTransitionData | inline |
| bin_boundaries_iplus1(core::Size const n, core::Size const m) const | core::scoring::bin_transitions::BinTransitionData | inline |
| bin_exists(std::string const &name) const | core::scoring::bin_transitions::BinTransitionData | |
| bin_exists_i(std::string const &name) const | core::scoring::bin_transitions::BinTransitionData | |
| bin_exists_iplus1(std::string const &name) const | core::scoring::bin_transitions::BinTransitionData | |
| bin_i_cdf_given_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| bin_iplus1_cdf_given_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| binname_index_from_string_i(std::string const &bin_name) const | core::scoring::bin_transitions::BinTransitionData | inline |
| binname_index_from_string_iplus1(std::string const &bin_name) const | core::scoring::bin_transitions::BinTransitionData | inline |
| binnames_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| binnames_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| binranges_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| binranges_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| binsums_i(core::Size const bin_index_i) const | core::scoring::bin_transitions::BinTransitionData | inline |
| binsums_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| binsums_i_cdf_ | core::scoring::bin_transitions::BinTransitionData | private |
| binsums_iplus1(core::Size const bin_index_iplus1) const | core::scoring::bin_transitions::BinTransitionData | inline |
| binsums_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| binsums_iplus1_cdf_ | core::scoring::bin_transitions::BinTransitionData | private |
| BinTransitionData() | core::scoring::bin_transitions::BinTransitionData | |
| BinTransitionData(BinTransitionData const &src) | core::scoring::bin_transitions::BinTransitionData | |
| check_property_overlap() const | core::scoring::bin_transitions::BinTransitionData | inline |
| check_residentity_overlap() const | core::scoring::bin_transitions::BinTransitionData | inline |
| clone() const | core::scoring::bin_transitions::BinTransitionData | |
| copy_i_bins_to_iplus1() | core::scoring::bin_transitions::BinTransitionData | inline |
| criteria_match_i(core::conformation::Residue const &rsd) const | core::scoring::bin_transitions::BinTransitionData | |
| criteria_match_iplus1(core::conformation::Residue const &rsd) const | core::scoring::bin_transitions::BinTransitionData | |
| finalize() | core::scoring::bin_transitions::BinTransitionData | |
| get_property_effect_name(BT_PROPERTIES const property) const | core::scoring::bin_transitions::BinTransitionData | |
| get_property_from_name(std::string const &name) const | core::scoring::bin_transitions::BinTransitionData | |
| get_subbin_type_from_name(std::string const &name) const | core::scoring::bin_transitions::BinTransitionData | |
| get_subbin_type_name(BTSB_SUBBIN_TYPE const type) const | core::scoring::bin_transitions::BinTransitionData | |
| has_property(BT_PROPERTIES const property, core::conformation::Residue const &rsd) const | core::scoring::bin_transitions::BinTransitionData | |
| in_bin(core::Real const &min, core::Real const &max, core::Real const &val) const | core::scoring::bin_transitions::BinTransitionData | inlineprivate |
| in_bin_i(core::Size const bin_index, core::conformation::Residue const &rsd) const | core::scoring::bin_transitions::BinTransitionData | |
| in_bin_iplus1(core::Size const bin_index, core::conformation::Residue const &rsd) const | core::scoring::bin_transitions::BinTransitionData | |
| is_in_list(BT_PROPERTIES const val, utility::vector1< BT_PROPERTIES > const &list) const | core::scoring::bin_transitions::BinTransitionData | inlineprivate |
| is_in_list(std::string const &str, utility::vector1< std::string > const &list) const | core::scoring::bin_transitions::BinTransitionData | inlineprivate |
| matrix_finalized() const | core::scoring::bin_transitions::BinTransitionData | inline |
| matrix_finalized_ | core::scoring::bin_transitions::BinTransitionData | private |
| matrix_initialized() const | core::scoring::bin_transitions::BinTransitionData | inline |
| matrix_initialized_ | core::scoring::bin_transitions::BinTransitionData | private |
| n_bins_i() const | core::scoring::bin_transitions::BinTransitionData | inline |
| n_bins_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| n_bins_iplus1() const | core::scoring::bin_transitions::BinTransitionData | inline |
| n_bins_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| n_mainchain_torsions_i() const | core::scoring::bin_transitions::BinTransitionData | inline |
| n_mainchain_torsions_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| n_mainchain_torsions_iplus1() const | core::scoring::bin_transitions::BinTransitionData | inline |
| n_mainchain_torsions_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| probability_matrix(core::Size const n, core::Size const m) const | core::scoring::bin_transitions::BinTransitionData | inline |
| probability_matrix_ | core::scoring::bin_transitions::BinTransitionData | private |
| prohibit_property_i(std::string const &property) | core::scoring::bin_transitions::BinTransitionData | inline |
| prohibit_property_iplus1(std::string const &property) | core::scoring::bin_transitions::BinTransitionData | inline |
| prohibit_res_identity_i(std::string const &resname) | core::scoring::bin_transitions::BinTransitionData | inline |
| prohibit_res_identity_iplus1(std::string const &resname) | core::scoring::bin_transitions::BinTransitionData | inline |
| prohibited_properties_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| prohibited_properties_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| prohibited_res_identities_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| prohibited_res_identities_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| properties_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| properties_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| random_bin_i() const | core::scoring::bin_transitions::BinTransitionData | |
| random_bin_iplus1() const | core::scoring::bin_transitions::BinTransitionData | |
| random_bin_iplus1_given_i(core::Size const bin_i) const | core::scoring::bin_transitions::BinTransitionData | |
| res_identities_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| res_identities_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| set_binname_i(core::Size const bin, std::string const name) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_binname_iplus1(core::Size const bin, std::string const name) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_binrange_i(core::Size const bin, core::Size const torsion, core::Real const &start, core::Real const &end) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_binrange_iplus1(core::Size const bin, core::Size const torsion, core::Real const &start, core::Real const &end) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_in_range(core::Real const &angle) const | core::scoring::bin_transitions::BinTransitionData | inlineprivate |
| set_matrix_entry(core::Size const n, core::Size const m, core::Real const &val) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_n_bins(core::Size const n_bins_i, core::Size const n_bins_iplus1) | core::scoring::bin_transitions::BinTransitionData | |
| set_n_mainchain_torsions_i(core::Size const val) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_n_mainchain_torsions_iplus1(core::Size const val) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_subbin_type_i(std::string const &type) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_subbin_type_iplus1(std::string const &type) | core::scoring::bin_transitions::BinTransitionData | inline |
| set_up_bin_cdfs() | core::scoring::bin_transitions::BinTransitionData | private |
| set_up_subbins() | core::scoring::bin_transitions::BinTransitionData | private |
| subbin_cdf_i(core::Size const n) const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_cdf_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| subbin_cdf_iplus1(core::Size const n) const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_cdf_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| subbin_end_i(core::Size const bin_i, core::Size const subbin_j, core::Size const mainchain_torsion_k) const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_end_iplus1(core::Size const bin_i, core::Size const subbin_j, core::Size const mainchain_torsion_k) const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_ranges_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| subbin_ranges_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| subbin_start_i(core::Size const bin_i, core::Size const subbin_j, core::Size const mainchain_torsion_k) const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_start_iplus1(core::Size const bin_i, core::Size const subbin_j, core::Size const mainchain_torsion_k) const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_type_i() const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_type_i_ | core::scoring::bin_transitions::BinTransitionData | private |
| subbin_type_iplus1() const | core::scoring::bin_transitions::BinTransitionData | inline |
| subbin_type_iplus1_ | core::scoring::bin_transitions::BinTransitionData | private |
| summarize_data(bool const verbose) const | core::scoring::bin_transitions::BinTransitionData | |
| total_counts_ | core::scoring::bin_transitions::BinTransitionData | private |
| trim_subbin_edges_and_rescale_subbin(core::Real &curbin_cdf_val, std::pair< core::Real, core::Real > &tors_range, core::Real const &phimin, core::Real const &phimax) const | core::scoring::bin_transitions::BinTransitionData | |
| which_bin_i(utility::vector1< core::Real > const &mainchain_torsions) const | core::scoring::bin_transitions::BinTransitionData | |
| which_bin_iplus1(utility::vector1< core::Real > const &mainchain_torsions) const | core::scoring::bin_transitions::BinTransitionData | |
| ~BinTransitionData() override | core::scoring::bin_transitions::BinTransitionData | |
1.8.7