protocols::calc_taskop_filters::RotamerBoltzmannWeight Member List

This is the complete list of members for protocols::calc_taskop_filters::RotamerBoltzmannWeight, including all inherited members.

apply(core::pose::Pose const &pose) const override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
class_name()	protocols::calc_taskop_filters::RotamerBoltzmannWeight	static
clear()	protocols::filters::Filter	inlinevirtual
clone() const override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
compute(core::pose::Pose const &pose) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
compute_boltz_probability() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
compute_Boltzmann_weight(core::pose::Pose const &pose, core::Size const resi) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
compute_entropy_reduction() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
compute_entropy_reduction(bool const cer)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
compute_entropy_reduction_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
compute_max_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
compute_modified_ddG(core::pose::Pose const &pose, std::ostream &out) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
ddG_threshold() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
ddG_threshold(core::Real const ddG)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
ddG_threshold_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
ddGs_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	mutableprivate
energy_reduction_factor(core::Real const factor)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
energy_reduction_factor() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
energy_reduction_factor_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
fast_calc_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
Filter()	protocols::filters::Filter
Filter(std::string const &)	protocols::filters::Filter
Filter(Filter const &)	protocols::filters::Filter
first_pass_ala_scan(core::pose::Pose const &pose) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
fresh_instance() const override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
get_type() const	protocols::filters::Filter	inlinevirtual
get_user_defined_name() const	protocols::filters::Filter	inline
interface_interaction_energy(core::pose::Pose const &pose, core::Size const res) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
name() const override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
no_modified_ddG(bool const no_ddg)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
no_modified_ddG_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
parent typedef	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
parse_my_tag(utility::tag::TagCOP tag, basic::datacache::DataMap &) override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::filters::Filter	virtual
provide_xml_schema(utility::tag::XMLSchemaDefinition &xsd)	protocols::calc_taskop_filters::RotamerBoltzmannWeight	static
rb_jump(core::Size const jump)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
rb_jump() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
rb_jump_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
repack(bool const repack)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
repack() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
repack_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
repacking_radius(core::Real const rad)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
repacking_radius() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
repacking_radius_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
report(std::ostream &out, core::pose::Pose const &pose) const override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
report_sm(core::pose::Pose const &pose) const override	protocols::calc_taskop_filters::RotamerBoltzmannWeight	virtual
rotamer_probabilities_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	mutableprivate
RotamerBoltzmannWeight()	protocols::calc_taskop_filters::RotamerBoltzmannWeight
score(core::pose::Pose &pose)	protocols::filters::Filter	virtual
scorefxn(core::scoring::ScoreFunctionOP scorefxn)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
scorefxn() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
scorefxn_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
scorename_	protocols::filters::Filter	protected
set_user_defined_name(std::string const &name)	protocols::filters::Filter	inline
skip_ala_scan() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
skip_ala_scan(bool const s)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
skip_ala_scan_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
skip_report_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
sym_dof_names(std::string const &dof_names)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
sym_dof_names() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
sym_dof_names_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
target_residues(std::string const &target_residues_str)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
target_residues_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
task_factory() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
task_factory(core::pack::task::TaskFactoryOP task_factory)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
task_factory_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
temperature() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
temperature(core::Real const temp)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
temperature_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
threshold_probabilities_per_residue_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
threshold_probability(core::chemical::AA const aa_type, core::Real const probability)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
threshold_probability(core::chemical::AA const aa_type) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
type() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
type(std::string const &s)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
type_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
unbound() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
unbound(bool const u)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
unbound_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
write2pdb() const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
write2pdb(bool const write)	protocols::calc_taskop_filters::RotamerBoltzmannWeight
write2pdb_	protocols::calc_taskop_filters::RotamerBoltzmannWeight	private
write_to_pdb(core::Size const residue, std::string const &residue_name, core::Real const boltzmann_weight) const	protocols::calc_taskop_filters::RotamerBoltzmannWeight
~Filter() override	protocols::filters::Filter
~RotamerBoltzmannWeight() override	protocols::calc_taskop_filters::RotamerBoltzmannWeight