protocols::loops::loops_definers Namespace Reference

Classes
class	LoopsDatabaseDefiner
class	LoopsDatabaseDefinerCreator
	creator for the LoopsDatabaseDefiner class More...
class	LoopsDefiner
class	LoopsDefinerCreator
	creator for the LoopsDefiner class More...
class	LoopsDefinerFactory
	Create LoopsDefiner Reporters. More...
class	LoopsDefinerLoader
	A class for loading Loops data into the XML parser's basic::datacache::DataMap. More...
class	LoopsDefinerLoaderCreator
class	LoopsDefinerRegistrator
	This templated class will register an instance of an LoopsDefinerCreator (class T) with the LoopsDefinerFactory. It will ensure that no LoopsDefinerCreator is registered twice, and, centralizes this registration logic so that thread safety issues can be handled in one place. More...
class	LoopsExplicitDefiner
class	LoopsExplicitDefinerCreator
	creator for the LoopsExplicitDefiner class More...
class	LoopsFileDefiner
class	LoopsFileDefinerCreator
	creator for the LoopsFileDefiner class More...
class	LoopsStringDefiner
	A LoopsDefiner which can be configured with a string in a Start:End:Cut,Start:End:Cut... format. (Cut optional, PDB numbering acceptable.) More...
class	LoopsStringDefinerCreator
	creator for the LoopsStringDefiner class More...

Typedefs
typedef utility::pointer::shared_ptr < LoopsDatabaseDefiner >	LoopsDatabaseDefinerOP
typedef utility::pointer::shared_ptr < LoopsDatabaseDefiner const >	LoopsDatabaseDefinerCOP
typedef utility::pointer::shared_ptr < LoopsDatabaseDefinerCreator >	LoopsDatabaseDefinerCreatorOP
typedef utility::pointer::shared_ptr < LoopsDatabaseDefinerCreator const >	LoopsDatabaseDefinerCreatorCOP
typedef utility::pointer::shared_ptr < LoopsDefiner >	LoopsDefinerOP
typedef utility::pointer::shared_ptr < LoopsDefiner const >	LoopsDefinerCOP
typedef utility::pointer::shared_ptr < LoopsDefinerCreator >	LoopsDefinerCreatorOP
typedef utility::pointer::shared_ptr < LoopsDefinerCreator const >	LoopsDefinerCreatorCOP
typedef utility::pointer::shared_ptr < LoopsExplicitDefiner >	LoopsExplicitDefinerOP
typedef utility::pointer::shared_ptr < LoopsExplicitDefiner const >	LoopsExplicitDefinerCOP
typedef utility::pointer::shared_ptr < LoopsExplicitDefinerCreator >	LoopsExplicitDefinerCreatorOP
typedef utility::pointer::shared_ptr < LoopsExplicitDefinerCreator const >	LoopsExplicitDefinerCreatorCOP
typedef utility::pointer::shared_ptr < LoopsFileDefiner >	LoopsFileDefinerOP
typedef utility::pointer::shared_ptr < LoopsFileDefiner const >	LoopsFileDefinerCOP
typedef utility::pointer::shared_ptr < LoopsFileDefinerCreator >	LoopsFileDefinerCreatorOP
typedef utility::pointer::shared_ptr < LoopsFileDefinerCreator const >	LoopsFileDefinerCreatorCOP
typedef utility::pointer::shared_ptr < LoopsStringDefiner >	LoopsStringDefinerOP
typedef utility::pointer::shared_ptr < LoopsStringDefiner const >	LoopsStringDefinerCOP

Functions
static basic::Tracer	tr ("protocols.loops.loops_definers.LoopsDefinerFactory")
static basic::Tracer	TR ("protocols.loops.loops_definers.LoopsDefinerLoader")
static Tracer	TR ("protocols.loops.loops_definers.LoopsExplicitDefiner")
static Tracer	TR ("protocols.loops.loops_definers.LoopsStringDefiner")
LoopsDefinerOP	load_loop_definitions (utility::tag::TagCOP tag, basic::datacache::DataMap const &data)
std::string	complex_type_name_for_loop_definer (std::string const &element_name)
void	xsd_type_definition_w_attributes (utility::tag::XMLSchemaDefinition &xsd, std::string const &loop_definer_type, std::string const &description, utility::tag::AttributeList const &attributes)
void	attributes_for_load_loop_definitions (utility::tag::AttributeList &attributes)
	Appends the attributes read by load_loop_definitions. More...

Typedef Documentation

typedef utility::pointer::shared_ptr< LoopsDatabaseDefiner const > protocols::loops::loops_definers::LoopsDatabaseDefinerCOP

typedef utility::pointer::shared_ptr< LoopsDatabaseDefinerCreator const > protocols::loops::loops_definers::LoopsDatabaseDefinerCreatorCOP

typedef utility::pointer::shared_ptr< LoopsDatabaseDefinerCreator > protocols::loops::loops_definers::LoopsDatabaseDefinerCreatorOP

typedef utility::pointer::shared_ptr< LoopsDatabaseDefiner > protocols::loops::loops_definers::LoopsDatabaseDefinerOP

typedef utility::pointer::shared_ptr< LoopsDefiner const > protocols::loops::loops_definers::LoopsDefinerCOP

typedef utility::pointer::shared_ptr< LoopsDefinerCreator const > protocols::loops::loops_definers::LoopsDefinerCreatorCOP

typedef utility::pointer::shared_ptr< LoopsDefinerCreator > protocols::loops::loops_definers::LoopsDefinerCreatorOP

typedef utility::pointer::shared_ptr< LoopsDefiner > protocols::loops::loops_definers::LoopsDefinerOP

typedef utility::pointer::shared_ptr< LoopsExplicitDefiner const > protocols::loops::loops_definers::LoopsExplicitDefinerCOP

typedef utility::pointer::shared_ptr< LoopsExplicitDefinerCreator const > protocols::loops::loops_definers::LoopsExplicitDefinerCreatorCOP

typedef utility::pointer::shared_ptr< LoopsExplicitDefinerCreator > protocols::loops::loops_definers::LoopsExplicitDefinerCreatorOP

typedef utility::pointer::shared_ptr< LoopsExplicitDefiner > protocols::loops::loops_definers::LoopsExplicitDefinerOP

typedef utility::pointer::shared_ptr< LoopsFileDefiner const > protocols::loops::loops_definers::LoopsFileDefinerCOP

typedef utility::pointer::shared_ptr< LoopsFileDefinerCreator const > protocols::loops::loops_definers::LoopsFileDefinerCreatorCOP

typedef utility::pointer::shared_ptr< LoopsFileDefinerCreator > protocols::loops::loops_definers::LoopsFileDefinerCreatorOP

typedef utility::pointer::shared_ptr< LoopsFileDefiner > protocols::loops::loops_definers::LoopsFileDefinerOP

typedef utility::pointer::shared_ptr< LoopsStringDefiner const > protocols::loops::loops_definers::LoopsStringDefinerCOP

typedef utility::pointer::shared_ptr< LoopsStringDefiner > protocols::loops::loops_definers::LoopsStringDefinerOP

Function Documentation

void protocols::loops::loops_definers::attributes_for_load_loop_definitions

(

utility::tag::AttributeList &

attributes

)

Appends the attributes read by load_loop_definitions.

Referenced by protocols::loops::FoldTreeFromLoops::provide_xml_schema(), protocols::loops::loop_mover::refine::LoopMover_Refine_CCD::provide_xml_schema(), and protocols::relax::loop::LoopRelaxMover::provide_xml_schema().

std::string protocols::loops::loops_definers::complex_type_name_for_loop_definer

(

std::string const &

element_name

)

Referenced by protocols::loops::loops_definers::LoopsDefinerFactory::define_loop_definer_xml_schema(), protocols::loops::loops_definers::LoopsExplicitDefiner::provide_xml_schema(), and xsd_type_definition_w_attributes().

LoopsDefinerOP protocols::loops::loops_definers::load_loop_definitions	(	utility::tag::TagCOP	tag,
		basic::datacache::DataMap const &	data
	)

Referenced by protocols::loops::FoldTreeFromLoops::parse_my_tag(), protocols::loops::loop_mover::refine::LoopMover_Refine_CCD::parse_my_tag(), and protocols::relax::loop::LoopRelaxMover::parse_my_tag().

static basic::Tracer protocols::loops::loops_definers::TR ( "protocols.loops.loops_definers.LoopsDefinerLoader"  )

static

Referenced by protocols::loops::loops_definers::LoopsDefinerLoader::load_data(), and protocols::loops::loops_definers::LoopsExplicitDefiner::parse_my_tag().

static basic::Tracer protocols::loops::loops_definers::tr ( "protocols.loops.loops_definers.LoopsDefinerFactory"  )

static

Referenced by protocols::loops::loops_definers::LoopsDefinerFactory::create_loops_definer().

static Tracer protocols::loops::loops_definers::TR ( "protocols.loops.loops_definers.LoopsStringDefiner"  )

static

static Tracer protocols::loops::loops_definers::TR ( "protocols.loops.loops_definers.LoopsExplicitDefiner"  )

static

void protocols::loops::loops_definers::xsd_type_definition_w_attributes	(	utility::tag::XMLSchemaDefinition &	xsd,
		std::string const &	loop_definer_type,
		std::string const &	description,
		utility::tag::AttributeList const &	attributes
	)

References complex_type_name_for_loop_definer().

Referenced by protocols::loops::loops_definers::LoopsStringDefiner::provide_xml_schema(), protocols::loops::loops_definers::LoopsFileDefiner::provide_xml_schema(), and protocols::loops::loops_definers::LoopsDatabaseDefiner::provide_xml_schema().