| any_neighbors_for_residue(int) const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| any_upper_neighbors_for_residue(int) const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| chemical_edge_set_ | core::scoring::PolymerBondedEnergyContainer | private |
| chemical_edges_ | core::scoring::PolymerBondedEnergyContainer | private |
| clone() const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| computed_ | core::scoring::PolymerBondedEnergyContainer | private |
| const_neighbor_iterator_begin(int resid) const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| const_neighbor_iterator_end(int resid) const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| const_upper_neighbor_iterator_begin(int resid) const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| const_upper_neighbor_iterator_end(int resid) const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| empty() const override | core::scoring::PolymerBondedEnergyContainer | virtual |
| get_computed(core::Size res1, core::Size res2) const | core::scoring::PolymerBondedEnergyContainer | inline |
| get_energy(core::Size res1, core::Size res2, core::Size scoreterm) const | core::scoring::PolymerBondedEnergyContainer | inline |
| initialize_peptide_bonded_pair_indices(core::pose::Pose const &pose) | core::scoring::PolymerBondedEnergyContainer | private |
| is_valid(core::pose::Pose const &pose) const | core::scoring::PolymerBondedEnergyContainer | |
| neighbor_iterator_begin(int resid) override | core::scoring::PolymerBondedEnergyContainer | virtual |
| neighbor_iterator_end(int resid) override | core::scoring::PolymerBondedEnergyContainer | virtual |
| operator<<(std::ostream &os, PolymerBondedEnergyContainer const &t) | core::scoring::PolymerBondedEnergyContainer | friend |
| PolymerBondedEnergyContainer(core::pose::Pose const &pose, utility::vector1< ScoreType > const &score_type_in) | core::scoring::PolymerBondedEnergyContainer | |
| score_types() const | core::scoring::PolymerBondedEnergyContainer | inline |
| score_types_ | core::scoring::PolymerBondedEnergyContainer | private |
| set_computed(core::Size res1, core::Size res2, bool val) | core::scoring::PolymerBondedEnergyContainer | inline |
| set_energy(core::Size res1, core::Size res2, core::Size scoreterm, core::Real E) | core::scoring::PolymerBondedEnergyContainer | inline |
| set_num_nodes(Size) | core::scoring::LREnergyContainer | inlinevirtual |
| size() const | core::scoring::PolymerBondedEnergyContainer | |
| size_ | core::scoring::PolymerBondedEnergyContainer | private |
| tables_ | core::scoring::PolymerBondedEnergyContainer | private |
| upper_neighbor_iterator_begin(int resid) override | core::scoring::PolymerBondedEnergyContainer | virtual |
| upper_neighbor_iterator_end(int resid) override | core::scoring::PolymerBondedEnergyContainer | virtual |
| ~LREnergyContainer() override | core::scoring::LREnergyContainer | |
| ~PolymerBondedEnergyContainer() override | core::scoring::PolymerBondedEnergyContainer | |