protocols::hybridization::InsertChunkMover Member List

This is the complete list of members for protocols::hybridization::InsertChunkMover, including all inherited members.

align_to_ss_only_	protocols::hybridization::InsertChunkMover	private
align_trial_counter_	protocols::hybridization::InsertChunkMover	private
anchor_insert_only_	protocols::hybridization::InsertChunkMover	private
apply(core::pose::Pose &pose) override	protocols::hybridization::InsertChunkMover	virtual
atom_map_	protocols::hybridization::InsertChunkMover	private
check_overlap(core::pose::Pose &pose)	protocols::hybridization::InsertChunkMover
clear_info()	protocols::moves::Mover	inlinevirtual
clone() const	protocols::moves::Mover	virtual
copy_ss_torsion_only_	protocols::hybridization::InsertChunkMover	private
create()	protocols::moves::Mover	virtual
fresh_instance() const	protocols::moves::Mover	virtual
get_additional_output()	protocols::moves::Mover	virtual
get_current_job() const	protocols::moves::Mover
get_current_tag() const	protocols::moves::Mover	inline
get_input_pose() const	protocols::moves::Mover
get_last_move_status() const	protocols::moves::Mover
get_local_sequence_mapping(core::pose::Pose &pose, int registry_shift=0, core::Size MAX_TRIAL=100)	protocols::hybridization::InsertChunkMover
get_name() const override	protocols::hybridization::InsertChunkMover	virtual
get_native_pose() const	protocols::moves::Mover
get_self_ptr() const	protocols::moves::Mover	inline
get_self_ptr()	protocols::moves::Mover	inline
get_self_weak_ptr() const	protocols::moves::Mover	inline
get_self_weak_ptr()	protocols::moves::Mover	inline
get_type() const	protocols::moves::Mover	inline
info()	protocols::moves::Mover	inlinevirtual
info() const	protocols::moves::Mover	inlinevirtual
init()	protocols::hybridization::InsertChunkMover
InsertChunkMover()	protocols::hybridization::InsertChunkMover
jump_number_	protocols::hybridization::InsertChunkMover	private
last_proposal_density_ratio()	protocols::moves::Mover	inlinevirtual
Mover()	protocols::moves::Mover
Mover(std::string const &type_name)	protocols::moves::Mover
name()	protocols::moves::Mover	inlinestatic
parse_my_tag(TagCOP tag, basic::datacache::DataMap &data)	protocols::moves::Mover	virtual
Pose typedef	protocols::moves::Mover
PoseCOP typedef	protocols::moves::Mover
provide_citation_info(basic::citation_manager::CitationCollectionList &) const	protocols::moves::Mover	virtual
register_options()	protocols::moves::Mover	inlinestatic
registry_shift_	protocols::hybridization::InsertChunkMover	private
reinitialize_for_each_job() const	protocols::moves::Mover	virtual
reinitialize_for_new_input() const	protocols::moves::Mover	virtual
reset_status()	protocols::moves::Mover
secstruct_	protocols::hybridization::InsertChunkMover	private
seqpos_aligned_start_	protocols::hybridization::InsertChunkMover	private
seqpos_aligned_stop_	protocols::hybridization::InsertChunkMover	private
seqpos_start_	protocols::hybridization::InsertChunkMover	private
seqpos_stop_	protocols::hybridization::InsertChunkMover	private
sequence_alignment_	protocols::hybridization::InsertChunkMover	private
sequence_alignment_local_	protocols::hybridization::InsertChunkMover	private
set_aligned_chunk(core::pose::Pose const &pose, core::Size const jump_number, bool anchor_insert_only_in)	protocols::hybridization::InsertChunkMover
set_bb_xyz_aligned(core::pose::Pose &pose)	protocols::hybridization::InsertChunkMover
set_current_job(protocols::jobdist::BasicJobCOP job)	protocols::moves::Mover
set_current_tag(std::string const &new_tag)	protocols::moves::Mover	inlinevirtual
set_input_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_last_move_status(MoverStatus status)	protocols::moves::Mover	protected
set_native_pose(PoseCOP pose)	protocols::moves::Mover	virtual
set_registry_shift(int registry_shift)	protocols::hybridization::InsertChunkMover
set_template(core::pose::PoseCOP template_pose, core::Size template_id, std::map< core::Size, core::Size > const &sequence_alignment)	protocols::hybridization::InsertChunkMover
set_type(std::string const &setting)	protocols::moves::Mover	inline
show(std::ostream &output=std::cout) const	protocols::moves::Mover	virtual
Strings typedef	protocols::moves::Mover
success()	protocols::hybridization::InsertChunkMover	inline
success_	protocols::hybridization::InsertChunkMover	private
TagCOP typedef	protocols::moves::Mover
template_id_	protocols::hybridization::InsertChunkMover	private
template_pose_	protocols::hybridization::InsertChunkMover	private
test_move(Pose &pose)	protocols::moves::Mover	inlinevirtual
trial_counter(core::Size ires)	protocols::hybridization::InsertChunkMover
type(const std::string &type_in)	protocols::moves::Mover	inline
type() const	protocols::moves::Mover	inline
~InsertChunkMover() override	protocols::hybridization::InsertChunkMover