core::scoring::rna::data::RNA_DMS_LowResolutionPotential Member List

This is the complete list of members for core::scoring::rna::data::RNA_DMS_LowResolutionPotential, including all inherited members.

careful_base_pair_classifier() const	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	inline
careful_base_pair_classifier_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
DMS_low_resolution_potential_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
DMS_values_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
evaluate(core::pose::Pose const &pose, pose::rna::RNA_Reactivity const &rna_reactivity)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential
figure_out_low_resolution_potential(numeric::MathMatrix< Real > &all_DMS_stats)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
get_rna_base_pairing_status(core::pose::Pose &pose, utility::vector1< bool > &wc_edge_paired, utility::vector1< bool > &hoogsteen_edge_paired, utility::vector1< bool > &sugar_edge_paired, utility::vector1< bool > &is_bulged, bool const already_scored=false)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential
get_wc_near_o2prime(core::pose::Pose const &pose, core::Size const i)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential
hoog_edge_paired() const	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	inline
hoog_edge_paired_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
initialize(core::pose::Pose &pose, bool const rna_base_pair_computed=false)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential
initialize_DMS_low_resolution_potential()	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
is_bulged() const	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	inline
is_bulged_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
is_protected_values_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
read_DMS_low_resolution_stats_file(std::string const &potential_file)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
RNA_DMS_LowResolutionPotential()	core::scoring::rna::data::RNA_DMS_LowResolutionPotential
set_careful_base_pair_classifier(bool const &setting)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	inline
sugar_edge_paired() const	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	inline
sugar_edge_paired_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
update_edge_paired(core::Size const i, core::Size const k, utility::vector1< bool > &wc_edge_paired, utility::vector1< bool > &hoogsteen_edge_paired, utility::vector1< bool > &sugar_edge_paired)	core::scoring::rna::data::RNA_DMS_LowResolutionPotential
wc_edge_paired() const	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	inline
wc_edge_paired_	core::scoring::rna::data::RNA_DMS_LowResolutionPotential	private
~RNA_DMS_LowResolutionPotential() override	core::scoring::rna::data::RNA_DMS_LowResolutionPotential