SSHashedFragmentStore.cc File Reference

#include <utility/VirtualBase.hh>
#include <core/conformation/symmetry/SymmetricConformation.hh>
#include <core/conformation/symmetry/SymmetryInfo.hh>
#include <core/conformation/symmetry/SymmetryInfo.fwd.hh>
#include <core/pose/symmetry/util.hh>
#include <protocols/indexed_structure_store/FragmentLookup.hh>
#include <protocols/indexed_structure_store/FragmentStore.hh>
#include <protocols/indexed_structure_store/FragmentStoreManager.hh>
#include <protocols/indexed_structure_store/H5FragmentStoreBackend.hh>
#include <protocols/indexed_structure_store/SSHashedFragmentStore.hh>
#include <core/pose/Pose.hh>
#include <core/scoring/dssp/Dssp.hh>
#include <core/sequence/SSManager.hh>
#include <core/types.hh>
#include <basic/Tracer.hh>
#include <basic/options/option.hh>
#include <basic/options/keys/indexed_structure_store.OptionKeys.gen.hh>
#include <utility/vector1.hh>
#include <numeric/alignment/QCPKernel.hh>
#include <numeric/xyzVector.hh>
#include <numeric/random/random.hh>
#include <map>
#include <set>

Namespaces
	protocols
	The instance of Loops contained by AbrelaxApplication should be replaced by a LoopsOP.
	protocols::indexed_structure_store

Functions
static basic::Tracer	TR ("core.indexed_structure_store.SSHashedFragmentStore")

Detailed Description

Parses the VALL by secondary structure after it is read in hdf5 format

Author

TJ Brunette tjbru.nosp@m.nett.nosp@m.e@gma.nosp@m.il.c.nosp@m.om

Function Documentation

static basic::Tracer TR ( "core.indexed_structure_store.SSHashedFragmentStore"  )

static