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src
core
scoring
scoring → chemical Relation
File in src/core/scoring
Includes file in src/core/chemical
aa_composition_energy
/
AACompositionEnergySetup.cc
ResidueType.hh
aa_composition_energy
/
AACompositionEnergySetup.hh
ResidueProperties.hh
aa_composition_energy
/
AACompositionEnergySetup.hh
ResidueProperty.hh
aa_composition_energy
/
AACompositionEnergySetup.hh
ResidueType.fwd.hh
aa_composition_energy
/
AACompositionEnergySetup.hh
ResidueType.hh
constraints
/
AmbiguousNMRDistanceConstraint.cc
AA.hh
constraints
/
AmbiguousNMRDistanceConstraint.cc
ResidueType.hh
constraints
/
AmbiguousNMRDistanceConstraint.hh
AA.hh
constraints
/
AngleConstraint.cc
ResidueType.hh
APBSWrapper.cc
AtomType.hh
APBSWrapper.cc
ResidueType.hh
etable
/
atom_pair_energy_inline.hh
AtomType.hh
atomic_depth
/
AtomicDepth.cc
AtomType.hh
atomic_depth
/
AtomicDepth.hh
AtomTypeSet.fwd.hh
constraints
/
AtomPairConstraint.cc
ResidueType.hh
constraints
/
AtomToAxisConstraint.cc
ResidueType.hh
AtomVDW.cc
AtomType.hh
AtomVDW.cc
AtomTypeSet.hh
AtomVDW.cc
ChemicalManager.hh
AtomVDW.hh
AtomTypeSet.fwd.hh
constraints
/
BackboneStubConstraint.cc
ChemicalManager.hh
constraints
/
BackboneStubConstraint.cc
ResidueType.hh
constraints
/
BackboneStubConstraint.cc
ResidueTypeSet.hh
constraints
/
BackboneStubLinearConstraint.cc
ChemicalManager.hh
constraints
/
BackboneStubLinearConstraint.cc
ResidueType.hh
constraints
/
BackboneStubLinearConstraint.cc
ResidueTypeSet.hh
dna
/
base_geometry.cc
AA.hh
dna
/
base_geometry.cc
ResidueType.hh
dna
/
base_geometry.hh
ResidueType.fwd.hh
etable
/
BaseEtableEnergy.tmpl.hh
AtomType.hh
constraints
/
BasePairConstraint.cc
ResidueType.hh
constraints
/
BasePairConstraint.cc
rna
/
RNA_Info.hh
constraints
/
BasePairConstraint.cc
rna
/
util.hh
constraints
/
BasePairConstraint.hh
rna
/
util.hh
constraints
/
BigBinConstraint.cc
ResidueType.hh
bin_transitions
/
BinTransitionData.hh
AA.hh
methods
/
branch_energy_util.cc
ResidueType.hh
carbon_hbonds
/
CarbonHBondEnergy.cc
AtomType.hh
carbon_hbonds
/
CarbonHBondPotential.cc
AtomTypeSet.hh
carbon_hbonds
/
CarbonHBondPotential.cc
ChemicalManager.hh
CenRotEnvPairPotential.cc
AA.hh
CenRotEnvPairPotential.hh
AA.hh
disulfides
/
CentroidDisulfideEnergyContainer.cc
ResidueConnection.hh
disulfides
/
CentroidDisulfideEnergyContainer.cc
ResidueType.hh
disulfides
/
CentroidDisulfideEnergyContainer.cc
ResidueTypeSet.hh
disulfides
/
CentroidDisulfideEnergyContainer.cc
VariantType.hh
disulfides
/
CentroidDisulfideEnergyContainer.hh
ResidueType.fwd.hh
disulfides
/
CentroidDisulfidePotential.cc
ChemicalManager.hh
disulfides
/
CentroidDisulfidePotential.cc
ResidueTypeSet.hh
methods
/
chainbreak_util.cc
VariantType.hh
constraints
/
ConstraintIO.cc
ResidueType.hh
etable
/
count_pair
/
CountPairFactory.cc
ResidueConnection.hh
etable
/
count_pair
/
CountPairGeneric.cc
AtomType.hh
etable
/
count_pair
/
CountPairGeneric.cc
ResidueConnection.hh
etable
/
count_pair
/
CountPairGeneric.hh
ResidueType.fwd.hh
elec
/
CountPairRepresentative.hh
ResidueType.fwd.hh
geometric_solvation
/
DatabaseOccSolEne.cc
AtomType.hh
geometric_solvation
/
DatabaseOccSolEne.cc
AtomTypeSet.hh
geometric_solvation
/
DatabaseOccSolEne.cc
ChemicalManager.hh
geometric_solvation
/
DatabaseOccSolEne.hh
AtomTypeSet.fwd.hh
interface_
/
DDPlookup.hh
AA.hh
methods
/
dfire
/
DFIRE_Potential.cc
ResidueType.hh
dna
/
DirectReadoutPotential.cc
AA.hh
disulfides
/
DisulfideAtomIndices.cc
ResidueType.hh
disulfides
/
DisulfideMatchingEnergyContainer.cc
ResidueConnection.hh
disulfides
/
DisulfideMatchingEnergyContainer.cc
ResidueType.hh
disulfides
/
DisulfideMatchingEnergyContainer.cc
ResidueTypeSet.hh
disulfides
/
DisulfideMatchingEnergyContainer.cc
VariantType.hh
disulfides
/
DisulfideMatchingEnergyContainer.hh
ResidueType.fwd.hh
dna
/
DNA_BasePotential.cc
AA.hh
dna
/
DNA_BasePotential.cc
ResidueType.hh
dna
/
DNA_DihedralPotential.cc
AA.hh
dna
/
DNA_DihedralPotential.cc
ResidueType.hh
dna
/
DNA_DihedralPotential.hh
ResidueType.fwd.hh
dna
/
DNA_EnvPairPotential.cc
AA.hh
dna
/
DNA_EnvPairPotential.cc
AtomTypeSet.hh
dna
/
DNA_EnvPairPotential.cc
ChemicalManager.hh
dna
/
DNA_EnvPairPotential.hh
AA.hh
dna
/
DNABFormPotential.cc
AA.hh
dna
/
DNATorsionPotential.cc
AA.hh
electron_density
/
ElectronDensity.cc
AtomType.hh
electron_density
/
ElectronDensity.cc
AtomTypeSet.hh
electron_density_atomwise
/
ElectronDensityAtomwise.cc
AtomType.hh
electron_density_atomwise
/
ElectronDensityAtomwise.cc
AtomTypeSet.hh
methods
/
EnergyMethodOptions.cc
ChemicalManager.fwd.hh
methods
/
EnergyMethodOptions.hh
AA.hh
EnvPairPotential.cc
AA.hh
EnvPairPotential.cc
VariantType.hh
epr_deer
/
EPRSpinLabel.cc
AtomType.hh
epr_deer
/
EPRSpinLabel.cc
ResidueType.hh
etable
/
Etable.cc
AtomType.hh
etable
/
Etable.cc
util.hh
etable
/
Etable.hh
AtomTypeSet.hh
etable
/
EtableEnergy.cc
VariantType.hh
elec
/
FA_ElecEnergy.cc
RestypeDestructionEvent.hh
elec
/
FA_ElecEnergy.hh
AtomType.hh
elec
/
FA_ElecEnergy.hh
ResidueType.fwd.hh
elec
/
FA_ElecEnergy.hh
RestypeDestructionEvent.fwd.hh
constraints
/
FabConstraint.cc
ResidueType.hh
facts
/
FACTSPose.cc
ResidueTypeSet.hh
facts
/
FACTSPotential.cc
AA.hh
facts
/
FACTSPotential.cc
AtomType.hh
facts
/
FACTSPotential.cc
AtomTypeSet.hh
facts
/
FACTSPotential.cc
ResidueTypeSet.hh
facts
/
FACTSPotential.cc
VariantType.hh
facts
/
FACTSPotential.fwd.hh
ResidueType.hh
facts
/
FACTSResidue.cc
AA.hh
facts
/
FACTSResidue.cc
AtomType.hh
facts
/
FACTSResidue.cc
AtomTypeSet.fwd.hh
facts
/
FACTSResidue.cc
AtomTypeSet.hh
facts
/
FACTSResidue.cc
ChemicalManager.hh
facts
/
FACTSResidue.cc
ElementSet.fwd.hh
facts
/
FACTSResidue.cc
orbitals
/
OrbitalTypeSet.fwd.hh
facts
/
FACTSResidue.cc
residue_io.hh
facts
/
FACTSResidue.cc
ResidueTypeSet.fwd.hh
facts
/
FACTSResidue.cc
RestypeDestructionEvent.hh
facts
/
FACTSResidue.cc
VariantType.hh
facts
/
FACTSResidue.hh
RestypeDestructionEvent.fwd.hh
func
/
FourPointsFunc.cc
ResidueType.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.cc
ChemicalManager.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.cc
ResidueType.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.cc
ResidueTypeFinder.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.cc
ResidueTypeSet.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.cc
RestypeDestructionEvent.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.hh
ResidueType.fwd.hh
custom_pair_distance
/
FullatomCustomPairDistanceEnergy.hh
RestypeDestructionEvent.fwd.hh
disulfides
/
FullatomDisulfideEnergyContainer.cc
ResidueConnection.hh
disulfides
/
FullatomDisulfideEnergyContainer.cc
ResidueType.hh
disulfides
/
FullatomDisulfideEnergyContainer.cc
VariantType.hh
disulfides
/
FullatomDisulfideEnergyContainer.hh
ResidueType.fwd.hh
GenBornPotential.cc
AtomType.hh
GenBornPotential.cc
AtomTypeSet.hh
GenBornPotential.cc
ResidueTypeSet.hh
GenBornPotential.cc
VariantType.hh
GenericBondedPotential.cc
AA.hh
GenericBondedPotential.cc
AtomType.hh
GenericBondedPotential.cc
ChemicalManager.hh
GenericBondedPotential.cc
MMAtomType.hh
GenericBondedPotential.cc
Patch.hh
GenericBondedPotential.cc
ResidueConnection.hh
GenericBondedPotential.cc
ResidueTypeSet.hh
GenericBondedPotential.cc
VariantType.hh
GenericBondedPotential.hh
Bond.fwd.hh
GenericBondedPotential.hh
ResidueType.hh
GenericBondedPotential.hh
ResidueTypeSet.fwd.hh
geometric_solvation
/
GeometricSolEnergyEvaluator.cc
AtomType.hh
geometric_solvation
/
GeometricSolEnergyEvaluator.cc
types.hh
geometric_solvation
/
GeometricSolEnergyEvaluator.cc
rna
/
util.hh
elec
/
GroupElec.cc
ChemicalManager.hh
elec
/
GroupElec.cc
ResidueTypeSet.hh
elec
/
GroupElec.hh
ResidueType.fwd.hh
hbonds
/
HBondEnergy.cc
AtomType.hh
hbonds
/
HBondEnergy.cc
AtomTypeSet.hh
hbonds
/
HBondEnergy.cc
rna
/
RNA_Info.hh
hbonds
/
hbonds.cc
AtomType.hh
hbonds
/
hbonds.cc
ResidueType.hh
hbonds
/
hbonds.cc
rna
/
RNA_Info.hh
hbonds
/
hbonds_geom.cc
AtomType.hh
hbonds
/
hbonds_geom.cc
AtomTypeSet.hh
hbonds
/
hbonds_geom.cc
ResidueType.hh
hbonds
/
hbonds_geom.cc
rna
/
RNA_Info.hh
hbonds
/
hbonds_geom.hh
types.hh
hbonds
/
HBondTypeManager.cc
types.hh
hbonds
/
HBondTypeManager.hh
types.hh
packing
/
HolesParams.hh
AtomTypeSet.hh
packing
/
HolesParams.hh
ChemicalManager.hh
HydroxylTorsionPotential.cc
ChemicalManager.hh
HydroxylTorsionPotential.cc
Patch.hh
HydroxylTorsionPotential.cc
ResidueTypeSet.hh
HydroxylTorsionPotential.cc
VariantType.hh
HydroxylTorsionPotential.hh
ResidueType.fwd.hh
packstat
/
LeeRichards.cc
AtomType.hh
sasa
/
LeGrandSasa.cc
AtomType.hh
sasa
/
LeGrandSasa.cc
AtomTypeSet.hh
lkball
/
LK_BallEnergy.cc
AtomType.hh
lkball
/
LK_BallInfo.cc
AtomType.hh
lkball
/
LK_BallInfo.cc
AtomTypeSet.hh
lkball
/
LK_BallInfo.cc
RestypeDestructionEvent.hh
lkball
/
LK_BallInfo.cc
types.hh
lkball
/
LK_BallInfo.hh
ResidueType.fwd.hh
lkball
/
LK_BallInfo.hh
RestypeDestructionEvent.fwd.hh
loop_graph
/
LoopGraph.cc
VariantType.hh
memb_etable
/
MembEtable.cc
AtomType.hh
memb_etable
/
MembEtable.hh
AtomTypeSet.hh
Membrane_FAPotential.cc
AA.hh
MembranePotential.cc
AA.hh
MembranePotential.cc
VariantType.hh
magnesium
/
MgKnowledgeBasedPotential.cc
AtomType.hh
magnesium
/
MgKnowledgeBasedPotential.cc
ResidueType.hh
magnesium
/
MgKnowledgeBasedPotential.hh
rna
/
RNA_FittedTorsionInfo.hh
mhc_epitope_energy
/
MHCEpitopeEnergySetup.cc
ResidueType.hh
mhc_epitope_energy
/
MHCEpitopePredictor.hh
AA.hh
mhc_epitope_energy
/
MHCEpitopePredictorMatrix.cc
AA.hh
mhc_epitope_energy
/
MHCEpitopePredictorMatrix.hh
AA.hh
methods
/
MMBondAngleEnergy.cc
AtomType.hh
methods
/
MMBondAngleEnergy.cc
ResidueConnection.hh
methods
/
MMBondAngleEnergy.cc
ResidueType.hh
mm
/
MMBondAngleLibrary.cc
MMAtomType.hh
mm
/
MMBondAngleLibrary.cc
MMAtomTypeSet.fwd.hh
mm
/
MMBondAngleLibrary.cc
MMAtomTypeSet.hh
mm
/
MMBondAngleLibrary.hh
MMAtomTypeSet.fwd.hh
mm
/
MMBondAngleResidueTypeParam.cc
Atom.hh
mm
/
MMBondAngleResidueTypeParam.cc
MMAtomType.hh
mm
/
MMBondAngleResidueTypeParam.cc
ResidueConnection.hh
mm
/
MMBondAngleResidueTypeParam.cc
ResidueType.hh
mm
/
MMBondAngleResidueTypeParam.hh
ResidueType.fwd.hh
mm
/
MMBondAngleResidueTypeParamSet.cc
ResidueConnection.hh
mm
/
MMBondAngleResidueTypeParamSet.cc
ResidueType.hh
mm
/
MMBondAngleResidueTypeParamSet.hh
ResidueType.fwd.hh
mm
/
MMBondAngleScore.cc
MMAtomTypeSet.fwd.hh
mm
/
MMBondAngleScore.hh
MMAtomTypeSet.fwd.hh
methods
/
MMBondLengthEnergy.cc
AtomType.hh
methods
/
MMBondLengthEnergy.cc
ResidueConnection.hh
methods
/
MMBondLengthEnergy.cc
ResidueType.hh
mm
/
MMBondLengthLibrary.cc
MMAtomType.hh
mm
/
MMBondLengthLibrary.cc
MMAtomTypeSet.fwd.hh
mm
/
MMBondLengthLibrary.cc
MMAtomTypeSet.hh
mm
/
MMBondLengthLibrary.hh
MMAtomTypeSet.fwd.hh
mm
/
MMBondLengthScore.cc
MMAtomTypeSet.fwd.hh
mm
/
MMBondLengthScore.hh
MMAtomTypeSet.fwd.hh
methods
/
MMLJEnergyInter.cc
ResidueType.hh
methods
/
MMLJEnergyIntra.cc
ResidueType.hh
mm
/
MMLJEnergyTable.cc
MMAtomTypeSet.hh
mm
/
MMLJLibrary.cc
MMAtomType.hh
mm
/
MMLJLibrary.cc
MMAtomTypeSet.hh
mm
/
MMLJLibrary.hh
MMAtomTypeSet.hh
mm
/
MMLJScore.cc
MMAtomTypeSet.hh
methods
/
MMTorsionEnergy.cc
ResidueConnection.hh
methods
/
MMTorsionEnergy.cc
ResidueType.hh
mm
/
MMTorsionLibrary.cc
MMAtomType.hh
mm
/
MMTorsionLibrary.cc
MMAtomTypeSet.fwd.hh
mm
/
MMTorsionLibrary.cc
MMAtomTypeSet.hh
mm
/
MMTorsionLibrary.hh
MMAtomTypeSet.fwd.hh
mm
/
MMTorsionScore.cc
MMAtomTypeSet.fwd.hh
mm
/
MMTorsionScore.hh
MMAtomTypeSet.fwd.hh
motif
/
motif_hash_stuff.cc
AtomType.hh
motif
/
motif_hash_stuff.cc
ChemicalManager.hh
motif
/
motif_hash_stuff.cc
ResidueTypeSet.hh
membrane
/
MPNonHelixPenalty.cc
AA.hh
membrane
/
MPNonHelixPenalty.cc
VariantType.hh
membrane
/
MPTerminiPenalty.cc
AA.hh
membrane
/
MPTerminiPenalty.cc
VariantType.hh
membrane
/
MPTMProjPenalty.cc
AA.hh
membrane
/
MPTMProjPenalty.cc
VariantType.hh
MultipoleElecPotential.cc
AtomType.hh
MultipoleElecPotential.cc
AtomTypeSet.hh
MultipoleElecPotential.cc
ResidueTypeSet.hh
MultipoleElecPotential.cc
VariantType.hh
constraints
/
NamedAngleConstraint.cc
ResidueType.hh
constraints
/
NamedAtomPairConstraint.cc
ResidueType.hh
constraints
/
NamedDihedralConstraint.cc
ResidueType.hh
netcharge_energy
/
NetChargeEnergySetup.cc
ResidueType.hh
nmer
/
NMerPSSMEnergy.cc
AA.hh
nmer
/
NMerPSSMEnergy.hh
AA.hh
nmer
/
NMerRefEnergy.cc
AA.hh
nmer
/
NMerSVMEnergy.cc
AA.hh
nmer
/
NMerSVMEnergy.hh
AA.hh
nmr
/
NMRDummySpinlabelEnsemble.cc
ResidueType.hh
nmr
/
NMRDummySpinlabelEnsemble.hh
ResidueType.fwd.hh
nmr
/
NMRSpinlabel.cc
ChemicalManager.hh
nmr
/
NMRSpinlabel.cc
ResidueType.hh
nmr
/
NMRSpinlabel.cc
ResidueTypeSet.hh
nmr
/
NMRSpinlabel.hh
ResidueType.fwd.hh
nv
/
NVlookup.hh
AA.hh
nv
/
NVscore.cc
AA.hh
nv
/
NVscore.cc
AtomType.hh
OmegaTether.hh
AA.hh
orbitals
/
OrbitalsLookup.cc
orbitals
/
OrbitalTypeMapper.hh
orbitals
/
OrbitalsLookup.hh
orbitals
/
OrbitalTypeMapper.fwd.hh
orbitals
/
OrbitalsScore.cc
AtomType.hh
orbitals
/
OrbitalsScore.cc
orbitals
/
OrbitalType.hh
orbitals
/
OrbitalsScore.cc
orbitals
/
OrbitalTypeMapper.fwd.hh
orbitals
/
OrbitalsScore.cc
ResidueTypeSet.hh
orbitals
/
OrbitalsScore.hh
orbitals
/
OrbitalTypeMapper.fwd.hh
orbitals
/
OrbitalsStatistics.cc
orbitals
/
OrbitalType.hh
P_AA.hh
AA.hh
P_AA_ABEGO3.hh
AA.hh
P_AA_ss.hh
AA.hh
PairEPotential.cc
AA.hh
cryst
/
PhenixInterface.cc
AA.hh
cryst
/
PhenixInterface.cc
AtomType.hh
cryst
/
PhenixInterface.cc
ResidueProperties.hh
cryst
/
PhenixInterface.cc
ResidueTypeSet.hh
cryst
/
PhenixInterface.cc
VariantType.hh
PointWaterPotential.cc
AA.hh
PointWaterPotential.cc
AtomType.hh
PointWaterPotential.hh
AA.hh
PoissonBoltzmannPotential.cc
AtomType.hh
PoissonBoltzmannPotential.cc
ResidueType.hh
PolymerBondedEnergyContainer.cc
ResidueConnection.hh
packing
/
PoseBalls.cc
AtomType.hh
packing
/
PoseBallsLite.cc
AtomType.hh
power_diagram
/
PowerDiagram.cc
AtomType.hh
ProQPotential.cc
AA.hh
ProQPotential.cc
VariantType.hh
Ramachandran.cc
AA.hh
Ramachandran.cc
ResidueConnection.hh
Ramachandran.hh
AA.hh
Ramachandran2B.hh
AA.hh
RamaPrePro.cc
ChemicalManager.hh
RamaPrePro.cc
mainchain_potential
/
MainchainScoreTable.hh
RamaPrePro.cc
ResConnID.hh
RamaPrePro.cc
ResidueConnection.hh
RamaPrePro.cc
ResidueTypeSet.hh
RamaPrePro.hh
AA.hh
RamaPrePro.hh
mainchain_potential
/
MainchainScoreTable.fwd.hh
RamaPrePro.hh
ResidueType.fwd.hh
constraints
/
ResidueTypeLinkingConstraint.cc
AA.hh
constraints
/
ResidueTypeLinkingConstraint.hh
AA.hh
rms_util.cc
AtomType.hh
rms_util.cc
automorphism.hh
rna
/
RNA_AtomVDW.cc
AA.hh
rna
/
RNA_AtomVDW.cc
ChemicalManager.hh
rna
/
RNA_AtomVDW.cc
ResidueType.hh
rna
/
RNA_AtomVDW.cc
ResidueTypeSet.hh
rna
/
RNA_AtomVDW.hh
AA.hh
rna
/
RNA_AtomVDW.hh
ResidueType.fwd.hh
rna
/
RNA_AtomVDW.hh
ResidueTypeSet.fwd.hh
rna
/
RNA_CentroidInfo.cc
AA.hh
rna
/
RNA_CentroidInfo.cc
rna
/
util.hh
rna
/
chemical_shift
/
RNA_ChemicalShiftPotential.cc
rna
/
util.hh
rna
/
chemical_shift
/
RNA_ChemicalShiftPotential.hh
AA.hh
rna
/
chemical_shift
/
RNA_CS_Parameters.hh
AA.hh
rna
/
chemical_shift
/
RNA_CS_Util.cc
AA.hh
rna
/
chemical_shift
/
RNA_CS_Util.hh
AA.hh
rna
/
data
/
RNA_DMS_Potential.cc
ResidueTypeSet.hh
rna
/
RNA_LowResolutionPotential.cc
AA.hh
rna
/
RNA_LowResolutionPotential.cc
ChemicalManager.hh
rna
/
RNA_LowResolutionPotential.cc
ResidueTypeSet.hh
rna
/
RNA_LowResolutionPotential.hh
AA.hh
rna
/
RNA_LowResolutionPotential.hh
ResidueTypeSet.fwd.hh
rna
/
RNA_Motif.hh
rna
/
util.hh
rna
/
RNA_ScoringInfo.cc
AA.hh
rna
/
RNA_SuitePotential.cc
rna
/
util.hh
rna
/
RNA_TorsionPotential.cc
AA.hh
rna
/
RNA_TorsionPotential.cc
AtomType.hh
rna
/
RNA_TorsionPotential.cc
rna
/
RNA_FittedTorsionInfo.hh
rna
/
RNA_TorsionPotential.cc
rna
/
RNA_Info.hh
rna
/
RNA_TorsionPotential.cc
rna
/
util.hh
rna
/
RNA_TorsionPotential.cc
VariantType.hh
rna
/
RNA_TorsionPotential.hh
rna
/
RNA_FittedTorsionInfo.fwd.hh
rna
/
RNP_LowResPairDistPotential.cc
AtomType.hh
rna
/
RNP_LowResPairDistPotential.cc
rna
/
util.hh
rna
/
RNP_LowResPotential.cc
AtomType.hh
rna
/
RNP_LowResPotential.cc
rna
/
util.hh
rna
/
RNP_LowResStackData.cc
AtomType.hh
rna
/
RNP_LowResStackData.cc
rna
/
util.hh
sasa.cc
AtomType.hh
sasa.cc
AtomTypeSet.hh
sasa
/
SasaCalc.cc
AtomType.hh
sasa
/
SasaMethod.cc
Atom.hh
sasa
/
SasaMethod.cc
ResidueType.hh
SASAPotential.cc
AtomType.hh
SASAPotential.cc
AtomTypeSet.hh
SASAPotential.cc
ResidueTypeSet.hh
SASAPotential.cc
VariantType.hh
ScoreFunctionFactory.cc
AA.hh
ScoringManager.cc
ChemicalManager.hh
ScoringManager.cc
mainchain_potential
/
MainchainScoreTable.fwd.hh
ScoringManager.cc
ResidueType.hh
ScoringManager.cc
mainchain_potential
/
util.hh
ScoringManager.hh
mainchain_potential
/
MainchainScoreTable.fwd.hh
ScoringManager.hh
ResidueType.fwd.hh
SecondaryStructurePotential.cc
AA.hh
SecondaryStructurePotential.cc
VariantType.hh
constraints
/
SequenceProfileConstraint.hh
AA.hh
dna
/
setup.cc
AA.hh
dna
/
setup.cc
ResidueType.hh
constraints
/
SiteConstraint.cc
carbohydrates
/
CarbohydrateInfo.hh
constraints
/
SiteConstraint.cc
ResidueType.hh
constraints
/
SiteConstraintResidues.cc
ResidueType.hh
SmoothEnvPairPotential.cc
AA.hh
SmoothEnvPairPotential.cc
VariantType.hh
SplitUnfoldedTwoBodyPotential.cc
AtomType.hh
SplitUnfoldedTwoBodyPotential.cc
ResidueType.hh
SplitUnfoldedTwoBodyPotential.hh
ResidueType.fwd.hh
SS_Info.hh
ResidueType.fwd.hh
packing
/
surf_vol.cc
ResidueType.hh
sym_e
/
symE.cc
AtomType.hh
rna
/
TNA_SuitePotential.cc
rna
/
util.hh
hbonds
/
types.cc
types.hh
hbonds
/
types.hh
types.hh
nmr
/
util.cc
AA.hh
fiber_diffraction
/
util.cc
AA.hh
sasa
/
util.cc
AtomType.hh
motif
/
util.cc
AtomType.hh
magnesium
/
util.cc
AtomType.hh
fiber_diffraction
/
util.cc
AtomType.hh
sasa
/
util.cc
AtomTypeSet.hh
fiber_diffraction
/
util.cc
AtomTypeSet.hh
carbohydrates
/
util.cc
carbohydrates
/
CarbohydrateInfo.hh
motif
/
util.cc
ChemicalManager.hh
fiber_diffraction
/
util.cc
ChemicalManager.hh
methods
/
util.cc
ResidueConnection.hh
nmr
/
util.cc
ResidueType.hh
dssp
/
util.cc
ResidueType.hh
fiber_diffraction
/
util.cc
ResidueTypeSet.hh
magnesium
/
util.cc
rna
/
RNA_FittedTorsionInfo.hh
fiber_diffraction
/
util.hh
ChemicalManager.hh
nmr
/
util.hh
ResidueType.fwd.hh
magnesium
/
util.hh
rna
/
RNA_FittedTorsionInfo.fwd.hh
vdwaals
/
VDW_Energy.cc
AtomType.hh
vdwaals
/
VDW_Energy.cc
AtomTypeSet.hh
vdwaals
/
VDW_Energy.cc
ChemicalManager.hh
VdWTinkerPotential.cc
AtomType.hh
VdWTinkerPotential.cc
AtomTypeSet.hh
VdWTinkerPotential.cc
ResidueTypeSet.hh
VdWTinkerPotential.cc
VariantType.hh
WaterAdductHBondPotential.cc
AtomType.hh
motif
/
xfrags.cc
AtomType.hh
motif
/
xfrags.cc
ChemicalManager.hh
Generated on Fri Apr 23 2021 03:47:09 for Rosetta by
1.8.7