canonical_sampling → core Relation

File in src/protocols/canonical_sampling	Includes file in src/core
AsyncMPITemperingBase.cc	scoring / ScoreFunction.hh
AsyncMPITemperingBase.cc	pack / task / TaskFactory.hh
AsyncMPITemperingBase.cc	pack / task / operation / TaskOperations.hh
AsyncMPITemperingBase.cc	types.hh
AsyncMPITemperingBase.hh	pose / Pose.fwd.hh
AsyncMPITemperingBase.hh	types.hh
BiasedMonteCarlo.cc	scoring / Energies.hh
BiasedMonteCarlo.cc	pose / Pose.hh
BiasedMonteCarlo.cc	scoring / ScoreFunction.hh
BiasedMonteCarlo.hh	types.hh
BiasEnergy.hh	pose / Pose.fwd.hh
BiasEnergy.hh	types.hh
CanonicalSamplingApplication.cc	scoring / methods / EnergyMethodOptions.hh
CanonicalSamplingApplication.cc	scoring / mm / MMBondAngleResidueTypeParamSet.hh
CanonicalSamplingApplication.cc	kinematics / MoveMap.hh
CanonicalSamplingApplication.cc	chemical / ResidueType.hh
CanonicalSamplingApplication.cc	scoring / ScoreFunctionFactory.hh
CanonicalSamplingApplication.cc	pack / task / TaskFactory.hh
CanonicalSamplingApplication.cc	pack / task / operation / TaskOperations.hh
CanonicalSamplingMover.cc	scoring / constraints / AtomPairConstraint.hh
CanonicalSamplingMover.cc	scoring / func / HarmonicFunc.hh
CanonicalSamplingMover.cc	pack / task / PackerTask.fwd.hh
CanonicalSamplingMover.cc	pose / PDBInfo.hh
CanonicalSamplingMover.cc	pose / Pose.hh
CanonicalSamplingMover.cc	conformation / Residue.hh
CanonicalSamplingMover.cc	energy_methods / RG_Energy_Fast.hh
CanonicalSamplingMover.cc	scoring / rms_util.hh
CanonicalSamplingMover.cc	scoring / ScoreFunction.hh
CanonicalSamplingMover.cc	io / silent / SilentFileData.hh
CanonicalSamplingMover.cc	io / silent / SilentFileOptions.hh
CanonicalSamplingMover.cc	io / silent / SilentStruct.hh
CanonicalSamplingMover.cc	io / silent / SilentStructFactory.hh
CanonicalSamplingMover.cc	scoring / constraints / util.hh
CanonicalSamplingMover.hh	pose / Pose.hh
DbTrajectoryRecorder.cc	io / silent / BinarySilentStruct.hh
DbTrajectoryRecorder.cc	scoring / Energies.hh
DbTrajectoryRecorder.cc	pose / Pose.hh
DbTrajectoryRecorder.cc	io / silent / SilentFileData.hh
DbTrajectoryRecorder.cc	io / silent / SilentFileOptions.hh
DbTrajectoryRecorder.cc	io / silent / SilentStruct.hh
DbTrajectoryRecorder.cc	io / silent / SilentStructFactory.hh
DbTrajectoryRecorder.cc	types.hh
DbTrajectoryRecorder.hh	pose / Pose.hh
DbTrajectoryRecorder.hh	types.hh
HamiltonianExchange.cc	scoring / ScoreFunction.hh
HamiltonianExchange.cc	scoring / ScoreFunctionFactory.hh
HamiltonianExchange.cc	pack / task / TaskFactory.hh
HamiltonianExchange.cc	pack / task / operation / TaskOperations.hh
HamiltonianExchange.cc	types.hh
HamiltonianExchange.hh	pose / Pose.fwd.hh
HamiltonianExchange.hh	scoring / ScoreFunction.fwd.hh
HamiltonianExchange.hh	types.hh
mc_convergence_checks / Heat_ConvergenceCheck.hh	pose / Pose.fwd.hh
mc_convergence_checks / Heat_ConvergenceCheck.hh	scoring / ScoreFunction.fwd.hh
mc_convergence_checks / Heat_ConvergenceCheck.hh	types.hh
mc_convergence_checks / HierarchicalLevel.cc	kinematics / Jump.hh
mc_convergence_checks / HierarchicalLevel.cc	pose / Pose.hh
mc_convergence_checks / HierarchicalLevel.cc	io / silent / SilentFileData.hh
mc_convergence_checks / HierarchicalLevel.cc	io / silent / SilentFileOptions.hh
mc_convergence_checks / HierarchicalLevel.cc	io / silent / SilentStruct.hh
mc_convergence_checks / HierarchicalLevel.cc	io / silent / SilentStructFactory.hh
mc_convergence_checks / HierarchicalLevel.cc	types.hh
mc_convergence_checks / HierarchicalLevel.hh	pose / Pose.hh
mc_convergence_checks / HierarchicalLevel.hh	io / silent / SilentStruct.hh
mc_convergence_checks / HierarchicalLevel.hh	types.hh
mc_convergence_checks / HPool.cc	io / silent / SilentFileData.hh
mc_convergence_checks / HPool.cc	io / silent / SilentFileOptions.hh
mc_convergence_checks / HPool.hh	pose / Pose.hh
MetricRecorder.cc	chemical / AA.hh
MetricRecorder.cc	id / AtomID.hh
MetricRecorder.cc	scoring / Energies.hh
MetricRecorder.cc	pose / Pose.hh
MetricRecorder.cc	conformation / Residue.hh
MetricRecorder.cc	pose / selection.hh
MetricRecorder.cc	id / TorsionID.hh
MetricRecorder.cc	types.hh
MetricRecorder.cc	pose / util.hh
MetricRecorder.cc	conformation / util.hh
MetricRecorder.hh	pose / Pose.fwd.hh
MetricRecorder.hh	id / TorsionID.fwd.hh
MetricRecorder.hh	types.hh
MetropolisHastingsMover.cc	io / silent / BinarySilentStruct.hh
MetropolisHastingsMover.cc	kinematics / MoveMap.hh
MetropolisHastingsMover.cc	chemical / ResidueType.hh
MetropolisHastingsMover.cc	scoring / ScoreFunction.hh
MetropolisHastingsMover.cc	io / silent / SilentFileData.hh
MetropolisHastingsMover.cc	io / silent / SilentFileOptions.hh
MetropolisHastingsMover.cc	io / silent / SilentStruct.hh
MetropolisHastingsMover.cc	pack / task / TaskFactory.hh
MetropolisHastingsMover.cc	pack / task / operation / TaskOperations.hh
MetropolisHastingsMover.cc	types.hh
MetropolisHastingsMover.cc	pose / util.hh
MetropolisHastingsMover.hh	pose / Pose.fwd.hh
MetropolisHastingsMover.hh	types.hh
mc_convergence_checks / MPIBPool_ConvergenceCheck.hh	pose / Pose.hh
mc_convergence_checks / MPIHPool_ConvergenceCheck.cc	pose / Pose.hh
mc_convergence_checks / MPIHPool_ConvergenceCheck.cc	io / silent / SilentStruct.hh
mc_convergence_checks / MPIHPool_ConvergenceCheck.cc	types.hh
mc_convergence_checks / MPIHPool_ConvergenceCheck.hh	pose / Pose.hh
mc_convergence_checks / MPIHPool_ConvergenceCheck.hh	io / silent / SilentStruct.hh
mc_convergence_checks / MPIHPool_ConvergenceCheck.hh	types.hh
mc_convergence_checks / MPIPool_ConvergenceCheck.hh	pose / Pose.hh
MultiTemperatureTrialCounter.hh	types.hh
ParallelTempering.cc	scoring / ScoreFunction.hh
ParallelTempering.cc	pack / task / TaskFactory.hh
ParallelTempering.cc	pack / task / operation / TaskOperations.hh
ParallelTempering.cc	types.hh
ParallelTempering.hh	pose / Pose.fwd.hh
ParallelTempering.hh	types.hh
PDBTrajectoryRecorder.cc	scoring / Energies.hh
PDBTrajectoryRecorder.cc	pose / Pose.hh
PDBTrajectoryRecorder.cc	io / raw_data / ScoreMap.hh
PDBTrajectoryRecorder.cc	io / raw_data / ScoreStructText.hh
PDBTrajectoryRecorder.hh	pose / Pose.fwd.hh
PDBTrajectoryRecorder.hh	types.hh
mc_convergence_checks / Pool_ConvergenceCheck.cc	pose / Pose.fwd.hh
mc_convergence_checks / Pool_ConvergenceCheck.cc	scoring / ScoreFunction.fwd.hh
mc_convergence_checks / Pool_ConvergenceCheck.cc	io / silent / SilentFileData.hh
mc_convergence_checks / Pool_ConvergenceCheck.cc	io / silent / SilentFileOptions.hh
mc_convergence_checks / Pool_ConvergenceCheck.cc	types.hh
mc_convergence_checks / Pool_ConvergenceCheck.hh	pose / Pose.fwd.hh
mc_convergence_checks / Pool_ConvergenceCheck.hh	scoring / ScoreFunction.fwd.hh
mc_convergence_checks / Pool_ConvergenceCheck.hh	types.hh
mc_convergence_checks / pool_util.cc	types.hh
mc_convergence_checks / pool_util.hh	types.hh
ProgressBarObserver.cc	pose / Pose.hh
ProgressBarObserver.cc	types.hh
ProgressBarObserver.hh	pose / Pose.fwd.hh
ProgressBarObserver.hh	types.hh
SidechainMetropolisHastingsMover.cc	kinematics / MoveMap.hh
SidechainMetropolisHastingsMover.cc	pose / Pose.hh
SidechainMetropolisHastingsMover.cc	conformation / Residue.hh
SidechainMetropolisHastingsMover.cc	scoring / ScoreFunction.hh
SidechainMetropolisHastingsMover.cc	pack / interaction_graph / SimpleInteractionGraph.hh
SidechainMetropolisHastingsMover.cc	types.hh
SidechainMetropolisHastingsMover.hh	pose / Pose.fwd.hh
SidechainMetropolisHastingsMover.hh	types.hh
SilentTrajectoryRecorder.cc	scoring / constraints / ConstraintSet.hh
SilentTrajectoryRecorder.cc	scoring / Energies.hh
SilentTrajectoryRecorder.cc	pose / Pose.hh
SilentTrajectoryRecorder.cc	io / raw_data / ScoreMap.hh
SilentTrajectoryRecorder.cc	io / silent / SilentFileData.hh
SilentTrajectoryRecorder.cc	io / silent / SilentFileOptions.hh
SilentTrajectoryRecorder.cc	types.hh
SilentTrajectoryRecorder.hh	pose / Pose.fwd.hh
SilentTrajectoryRecorder.hh	types.hh
SimulatedTempering.cc	scoring / ScoreFunction.hh
SimulatedTempering.cc	pack / task / TaskFactory.hh
SimulatedTempering.cc	pack / task / operation / TaskOperations.hh
SimulatedTempering.cc	types.hh
SimulatedTempering.hh	pose / Pose.fwd.hh
SimulatedTempering.hh	types.hh
TemperatureController.cc	scoring / Energies.hh
TemperatureController.cc	pose / Pose.hh
TemperatureController.cc	scoring / ScoreFunction.hh
TemperatureController.cc	pack / task / TaskFactory.hh
TemperatureController.cc	pack / task / operation / TaskOperations.hh
TemperatureController.cc	types.hh
TemperatureController.hh	pose / Pose.fwd.hh
TemperatureController.hh	types.hh
TemperingBase.cc	scoring / ScoreFunction.hh
TemperingBase.cc	pack / task / TaskFactory.hh
TemperingBase.cc	pack / task / operation / TaskOperations.hh
TemperingBase.cc	types.hh
TemperingBase.hh	pose / Pose.fwd.hh
TemperingBase.hh	types.hh
ThermodynamicMover.cc	id / DOF_ID_Range.hh
ThermodynamicMover.cc	types.hh
ThermodynamicMover.hh	id / DOF_ID_Range.fwd.hh
ThermodynamicMover.hh	id / DOF_ID_Range.hh
ThermodynamicMover.hh	pose / Pose.fwd.hh
ThermodynamicMover.hh	id / TorsionID_Range.fwd.hh
ThermodynamicMover.hh	id / TorsionID_Range.hh
ThermodynamicMover.hh	types.hh
ThermodynamicObserver.cc	types.hh
ThermodynamicObserver.hh	pose / Pose.fwd.hh
ThermodynamicObserver.hh	types.hh
TrajectoryRecorder.cc	scoring / Energies.hh
TrajectoryRecorder.cc	pose / Pose.hh
TrajectoryRecorder.hh	pose / Pose.fwd.hh
TrajectoryRecorder.hh	types.hh
TrialCounterObserver.cc	pose / Pose.hh
TrialCounterObserver.cc	types.hh
TrialCounterObserver.hh	id / DOF_ID_Range.hh
TrialCounterObserver.hh	pose / Pose.fwd.hh
TrialCounterObserver.hh	id / TorsionID_Range.hh
TrialCounterObserver.hh	types.hh
WTEBiasEnergy.cc	scoring / Energies.hh
WTEBiasEnergy.cc	pose / Pose.hh
WTEBiasEnergy.hh	pose / Pose.fwd.hh
WTEBiasEnergy.hh	types.hh