mpi_refinement → core Relation

File in src/protocols/mpi_refinement	Includes file in src/core
Clusterer.cc	io / silent / BinarySilentStruct.hh
Clusterer.cc	import_pose / import_pose.hh
Clusterer.cc	pose / Pose.hh
Clusterer.cc	io / silent / ProteinSilentStruct.hh
Clusterer.cc	io / silent / SilentStruct.hh
Clusterer.hh	io / silent / BinarySilentStruct.hh
Clusterer.hh	pose / Pose.hh
Clusterer.hh	io / silent / ProteinSilentStruct.hh
Clusterer.hh	io / silent / SilentStruct.hh
MPI_Refine_Emperor.cc	io / silent / BinarySilentStruct.hh
MPI_Refine_Emperor.cc	io / silent / ProteinSilentStruct.hh
MPI_Refine_Emperor.cc	io / silent / SilentStruct.hh
MPI_Refine_Emperor.hh	io / silent / SilentStruct.fwd.hh
MPI_Refine_Emperor.hh	types.hh
MPI_Refine_Master.cc	io / silent / BinarySilentStruct.hh
MPI_Refine_Master.cc	chemical / ChemicalManager.hh
MPI_Refine_Master.cc	pose / Pose.hh
MPI_Refine_Master.cc	io / silent / ProteinSilentStruct.hh
MPI_Refine_Master.cc	io / silent / ProteinSilentStruct.tmpl.hh
MPI_Refine_Master.cc	scoring / ScoreFunction.hh
MPI_Refine_Master.cc	scoring / ScoreFunctionFactory.hh
MPI_Refine_Master.cc	pose / selection.hh
MPI_Refine_Master.cc	io / silent / SilentFileData.hh
MPI_Refine_Master.cc	io / silent / SilentFileOptions.hh
MPI_Refine_Master.cc	io / silent / SilentStruct.hh
MPI_Refine_Master.cc	io / silent / SilentStructFactory.hh
MPI_Refine_Master.cc	util / SwitchResidueTypeSet.hh
MPI_Refine_Master.cc	pose / util.hh
MPI_Refine_Master.hh	io / silent / SilentStruct.fwd.hh
MPI_Refine_Master.hh	types.hh
MPI_Refinement.cc	io / silent / BinarySilentStruct.hh
MPI_Refinement.cc	chemical / ChemicalManager.hh
MPI_Refinement.cc	scoring / constraints / ConstraintIO.hh
MPI_Refinement.cc	scoring / constraints / ConstraintSet.hh
MPI_Refinement.cc	pose / extra_pose_info_util.hh
MPI_Refinement.cc	import_pose / import_pose.hh
MPI_Refinement.cc	import_pose / pose_stream / MetaPoseInputStream.hh
MPI_Refinement.cc	pose / Pose.hh
MPI_Refinement.cc	io / silent / ProteinSilentStruct.hh
MPI_Refinement.cc	io / silent / ProteinSilentStruct.tmpl.hh
MPI_Refinement.cc	chemical / ResidueTypeSet.hh
MPI_Refinement.cc	scoring / rms_util.hh
MPI_Refinement.cc	scoring / ScoreFunction.hh
MPI_Refinement.cc	scoring / ScoreFunctionFactory.hh
MPI_Refinement.cc	scoring / ScoreType.hh
MPI_Refinement.cc	io / silent / SilentFileData.hh
MPI_Refinement.cc	io / silent / SilentFileOptions.hh
MPI_Refinement.cc	io / silent / SilentStruct.hh
MPI_Refinement.cc	io / silent / SilentStructFactory.hh
MPI_Refinement.cc	scoring / constraints / util.hh
MPI_Refinement.cc	import_pose / pose_stream / util.hh
MPI_Refinement.cc	pose / util.hh
MPI_Refinement.hh	kinematics / Jump.hh
MPI_Refinement.hh	pose / Pose.hh
MPI_Refinement.hh	scoring / ScoreFunction.hh
MPI_Refinement.hh	io / silent / SilentStruct.fwd.hh
MPI_Refinement.hh	types.hh
MultiObjective.cc	io / silent / BinarySilentStruct.hh
MultiObjective.cc	chemical / ChemicalManager.hh
MultiObjective.cc	import_pose / import_pose.hh
MultiObjective.cc	pose / Pose.hh
MultiObjective.cc	io / silent / ProteinSilentStruct.hh
MultiObjective.cc	chemical / ResidueTypeSet.hh
MultiObjective.cc	scoring / ScoreFunction.hh
MultiObjective.cc	scoring / ScoreFunctionFactory.hh
MultiObjective.cc	scoring / ScoreType.hh
MultiObjective.cc	io / silent / SilentFileData.hh
MultiObjective.cc	io / silent / SilentStruct.hh
MultiObjective.cc	scoring / constraints / util.hh
MultiObjective.cc	pose / util.hh
MultiObjective.hh	kinematics / Jump.hh
MultiObjective.hh	pose / Pose.hh
MultiObjective.hh	scoring / ScoreFunction.hh
MultiObjective.hh	io / silent / SilentStruct.fwd.hh
MultiObjective.hh	types.hh
Scheduler.hh	types.hh
Serial_Refine.cc	io / silent / BinarySilentStruct.hh
Serial_Refine.cc	chemical / ChemicalManager.hh
Serial_Refine.cc	pose / extra_pose_info_util.hh
Serial_Refine.cc	import_pose / import_pose.hh
Serial_Refine.cc	pose / Pose.hh
Serial_Refine.cc	scoring / ScoreFunction.hh
Serial_Refine.cc	scoring / ScoreFunctionFactory.hh
Serial_Refine.cc	io / silent / SilentFileData.hh
Serial_Refine.cc	io / silent / SilentFileOptions.hh
Serial_Refine.cc	io / silent / SilentStruct.hh
Serial_Refine.cc	io / silent / SilentStructFactory.hh
Serial_Refine.cc	pose / util.hh
Serial_Refine.hh	pose / Pose.hh
Serial_Refine.hh	io / silent / SilentStruct.fwd.hh
Serial_Refine.hh	types.hh
StructAvrgMover.cc	id / AtomID.hh
StructAvrgMover.cc	id / AtomID_Map.hh
StructAvrgMover.cc	chemical / ChemicalManager.hh
StructAvrgMover.cc	pose / Pose.hh
StructAvrgMover.cc	conformation / Residue.hh
StructAvrgMover.cc	chemical / ResidueTypeSet.hh
StructAvrgMover.cc	scoring / rms_util.hh
StructAvrgMover.cc	scoring / ScoreFunction.hh
StructAvrgMover.cc	scoring / ScoreFunctionFactory.hh
StructAvrgMover.cc	scoring / ScoreType.hh
StructAvrgMover.cc	pose / util.hh
StructAvrgMover.hh	pose / Pose.hh
StructAvrgMover.hh	scoring / ScoreFunction.hh
util.cc	chemical / AA.hh
util.cc	id / AtomID.hh
util.cc	id / AtomID_Map.hh
util.cc	scoring / constraints / AtomPairConstraint.hh
util.cc	io / silent / BinarySilentStruct.hh
util.cc	scoring / constraints / BoundConstraint.hh
util.cc	optimization / CartesianMinimizer.hh
util.cc	scoring / constraints / CoordinateConstraint.hh
util.cc	kinematics / FoldTree.hh
util.cc	scoring / func / HarmonicFunc.hh
util.cc	util / kinematics_util.hh
util.cc	optimization / MinimizerOptions.hh
util.cc	kinematics / MoveMap.hh
util.cc	pack / task / PackerTask.hh
util.cc	pose / PDBInfo.hh
util.cc	pose / Pose.hh
util.cc	conformation / Residue.hh
util.cc	chemical / ResidueTypeSet.hh
util.cc	scoring / rms_util.hh
util.cc	scoring / ScoreFunction.hh
util.cc	scoring / ScoreType.hh
util.cc	pose / selection.hh
util.cc	io / silent / SilentStruct.hh
util.cc	pack / task / TaskFactory.hh
util.cc	pack / task / operation / TaskOperations.hh
util.cc	types.hh
util.cc	pose / util.hh
util.hh	chemical / AA.hh
util.hh	id / AtomID.hh
util.hh	id / AtomID_Map.hh
util.hh	scoring / constraints / AtomPairConstraint.hh
util.hh	io / silent / BinarySilentStruct.hh
util.hh	scoring / constraints / BoundConstraint.hh
util.hh	optimization / CartesianMinimizer.hh
util.hh	kinematics / FoldTree.hh
util.hh	util / kinematics_util.hh
util.hh	optimization / MinimizerOptions.hh
util.hh	kinematics / MoveMap.hh
util.hh	pack / task / PackerTask.hh
util.hh	pose / PDBInfo.hh
util.hh	pose / Pose.hh
util.hh	conformation / Residue.hh
util.hh	chemical / ResidueTypeSet.hh
util.hh	scoring / rms_util.hh
util.hh	scoring / ScoreFunction.hh
util.hh	scoring / ScoreType.hh
util.hh	pose / selection.hh
util.hh	io / silent / SilentStruct.hh
util.hh	pack / task / TaskFactory.hh
util.hh	pack / task / operation / TaskOperations.hh
util.hh	types.hh
util.hh	pose / util.hh
WorkUnit_Aggressive.cc	optimization / AtomTreeMinimizer.hh
WorkUnit_Aggressive.cc	io / silent / BinarySilentStruct.hh
WorkUnit_Aggressive.cc	io / pdb / build_pose_as_is.hh
WorkUnit_Aggressive.cc	chemical / ChemicalManager.hh
WorkUnit_Aggressive.cc	conformation / Conformation.hh
WorkUnit_Aggressive.cc	scoring / dssp / Dssp.hh
WorkUnit_Aggressive.cc	scoring / Energies.hh
WorkUnit_Aggressive.cc	scoring / EnergyMap.hh
WorkUnit_Aggressive.cc	scoring / methods / EnergyMethodOptions.hh
WorkUnit_Aggressive.cc	import_pose / import_pose.hh
WorkUnit_Aggressive.cc	optimization / MinimizerOptions.hh
WorkUnit_Aggressive.cc	kinematics / MoveMap.hh
WorkUnit_Aggressive.cc	io / silent / ProteinSilentStruct.hh
WorkUnit_Aggressive.cc	io / silent / ProteinSilentStruct.tmpl.hh
WorkUnit_Aggressive.cc	chemical / ResidueTypeSet.hh
WorkUnit_Aggressive.cc	scoring / rms_util.hh
WorkUnit_Aggressive.cc	scoring / ScoreFunction.hh
WorkUnit_Aggressive.cc	scoring / ScoreFunctionFactory.hh
WorkUnit_Aggressive.cc	scoring / ScoreType.hh
WorkUnit_Aggressive.cc	pose / selection.hh
WorkUnit_Aggressive.cc	io / silent / SilentFileData.hh
WorkUnit_Aggressive.cc	io / silent / SilentStruct.hh
WorkUnit_Aggressive.cc	io / silent / SilentStructFactory.hh
WorkUnit_Aggressive.cc	util / SwitchResidueTypeSet.hh
WorkUnit_Aggressive.cc	conformation / util.hh
WorkUnit_Aggressive.cc	scoring / constraints / util.hh
WorkUnit_Loop.cc	io / silent / BinarySilentStruct.hh
WorkUnit_Loop.cc	io / pdb / build_pose_as_is.hh
WorkUnit_Loop.cc	chemical / ChemicalManager.hh
WorkUnit_Loop.cc	conformation / Conformation.hh
WorkUnit_Loop.cc	scoring / Energies.hh
WorkUnit_Loop.cc	scoring / EnergyMap.hh
WorkUnit_Loop.cc	scoring / methods / EnergyMethodOptions.hh
WorkUnit_Loop.cc	pose / extra_pose_info_util.hh
WorkUnit_Loop.cc	fragment / FragmentIO.hh
WorkUnit_Loop.cc	import_pose / import_pose.hh
WorkUnit_Loop.cc	io / silent / ProteinSilentStruct.hh
WorkUnit_Loop.cc	select / residue_selector / ResidueSelector.hh
WorkUnit_Loop.cc	select / residue_selector / ResidueSpanSelector.hh
WorkUnit_Loop.cc	chemical / ResidueTypeSet.hh
WorkUnit_Loop.cc	scoring / ScoreFunction.hh
WorkUnit_Loop.cc	scoring / ScoreFunctionFactory.hh
WorkUnit_Loop.cc	pose / selection.hh
WorkUnit_Loop.cc	io / silent / SilentFileData.hh
WorkUnit_Loop.cc	io / silent / SilentStruct.hh
WorkUnit_Loop.cc	io / silent / SilentStructFactory.hh
WorkUnit_Loop.cc	util / SwitchResidueTypeSet.hh
WorkUnit_Loop.cc	scoring / constraints / util.hh
WorkUnit_Loop.cc	conformation / util.hh
WorkUnit_Relax.cc	optimization / AtomTreeMinimizer.hh
WorkUnit_Relax.cc	io / silent / BinarySilentStruct.hh
WorkUnit_Relax.cc	io / pdb / build_pose_as_is.hh
WorkUnit_Relax.cc	chemical / ChemicalManager.hh
WorkUnit_Relax.cc	conformation / Conformation.hh
WorkUnit_Relax.cc	scoring / dssp / Dssp.hh
WorkUnit_Relax.cc	scoring / Energies.hh
WorkUnit_Relax.cc	scoring / EnergyMap.hh
WorkUnit_Relax.cc	scoring / methods / EnergyMethodOptions.hh
WorkUnit_Relax.cc	import_pose / import_pose.hh
WorkUnit_Relax.cc	optimization / MinimizerOptions.hh
WorkUnit_Relax.cc	kinematics / MoveMap.hh
WorkUnit_Relax.cc	pack / task / PackerTask.hh
WorkUnit_Relax.cc	io / silent / ProteinSilentStruct.hh
WorkUnit_Relax.cc	io / silent / ProteinSilentStruct.tmpl.hh
WorkUnit_Relax.cc	chemical / ResidueTypeSet.hh
WorkUnit_Relax.cc	scoring / rms_util.hh
WorkUnit_Relax.cc	scoring / ScoreFunction.hh
WorkUnit_Relax.cc	scoring / ScoreFunctionFactory.hh
WorkUnit_Relax.cc	scoring / ScoreType.hh
WorkUnit_Relax.cc	io / silent / SilentFileData.hh
WorkUnit_Relax.cc	io / silent / SilentStruct.hh
WorkUnit_Relax.cc	io / silent / SilentStructFactory.hh
WorkUnit_Relax.cc	util / SwitchResidueTypeSet.hh
WorkUnit_Relax.cc	pack / task / TaskFactory.hh
WorkUnit_Relax.cc	conformation / util.hh
WorkUnit_Relax.cc	scoring / constraints / util.hh
WorkUnit_Sampler.cc	optimization / AtomTreeMinimizer.hh
WorkUnit_Sampler.cc	io / silent / BinarySilentStruct.hh
WorkUnit_Sampler.cc	io / pdb / build_pose_as_is.hh
WorkUnit_Sampler.cc	optimization / CartesianMinimizer.hh
WorkUnit_Sampler.cc	chemical / ChemicalManager.hh
WorkUnit_Sampler.cc	conformation / Conformation.hh
WorkUnit_Sampler.cc	optimization / MinimizerOptions.hh
WorkUnit_Sampler.cc	kinematics / MoveMap.hh
WorkUnit_Sampler.cc	pack / task / PackerTask.hh
WorkUnit_Sampler.cc	io / silent / ProteinSilentStruct.hh
WorkUnit_Sampler.cc	chemical / ResidueTypeSet.hh
WorkUnit_Sampler.cc	scoring / rms_util.hh
WorkUnit_Sampler.cc	scoring / ScoreFunction.hh
WorkUnit_Sampler.cc	scoring / ScoreFunctionFactory.hh
WorkUnit_Sampler.cc	scoring / ScoreType.hh
WorkUnit_Sampler.cc	io / silent / SilentFileData.hh
WorkUnit_Sampler.cc	io / silent / SilentFileOptions.hh
WorkUnit_Sampler.cc	io / silent / SilentStruct.hh
WorkUnit_Sampler.cc	io / silent / SilentStructFactory.hh
WorkUnit_Sampler.cc	pack / task / TaskFactory.hh
WorkUnit_Sampler.cc	conformation / util.hh
WorkUnit_Sampler.cc	scoring / constraints / util.hh
WorkUnit_Sampler.hh	kinematics / MoveMap.hh
WorkUnit_Sampler.hh	scoring / ScoreFunction.hh