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rna → core Relation

File in src/protocols/stepwise/legacy/modeler/rnaIncludes file in src/core
RNA_AnalyticLoopCloser.cckinematics / tree / Atom.hh
RNA_AnalyticLoopCloser.ccid / AtomID.hh
RNA_AnalyticLoopCloser.cckinematics / AtomTree.hh
RNA_AnalyticLoopCloser.ccid / DOF_ID.hh
RNA_AnalyticLoopCloser.cckinematics / FoldTree.hh
RNA_AnalyticLoopCloser.ccid / NamedAtomID.hh
RNA_AnalyticLoopCloser.ccpose / Pose.hh
RNA_AnalyticLoopCloser.ccconformation / Residue.hh
RNA_AnalyticLoopCloser.ccchemical / ResidueType.hh
RNA_AnalyticLoopCloser.ccchemical / rna / RNA_Info.hh
RNA_AnalyticLoopCloser.ccscoring / ScoreFunction.hh
RNA_AnalyticLoopCloser.cctypes.hh
RNA_AnalyticLoopCloser.ccchemical / VariantType.hh
RNA_AnalyticLoopCloser.hhkinematics / tree / Atom.fwd.hh
RNA_AnalyticLoopCloser.hhid / DOF_ID.fwd.hh
RNA_AnalyticLoopCloser.hhid / NamedAtomID.hh
RNA_AnalyticLoopCloser.hhpose / Pose.fwd.hh
RNA_AnalyticLoopCloser.hhscoring / ScoreFunction.hh
RNA_AnalyticLoopCloser.hhtypes.hh
StepWiseRNA_Clusterer.ccio / silent / BinarySilentStruct.hh
StepWiseRNA_Clusterer.ccchemical / ChemicalManager.hh
StepWiseRNA_Clusterer.ccscoring / Energies.hh
StepWiseRNA_Clusterer.ccpose / extra_pose_info_util.hh
StepWiseRNA_Clusterer.ccpose / Pose.hh
StepWiseRNA_Clusterer.ccimport_pose / pose_stream / PoseInputStream.fwd.hh
StepWiseRNA_Clusterer.ccimport_pose / pose_stream / PoseInputStream.hh
StepWiseRNA_Clusterer.ccchemical / ResidueTypeSet.hh
StepWiseRNA_Clusterer.ccscoring / rms_util.hh
StepWiseRNA_Clusterer.ccscoring / rms_util.tmpl.hh
StepWiseRNA_Clusterer.ccscoring / ScoreFunction.hh
StepWiseRNA_Clusterer.ccscoring / ScoreFunctionFactory.hh
StepWiseRNA_Clusterer.ccio / silent / SilentFileData.fwd.hh
StepWiseRNA_Clusterer.ccio / silent / SilentFileData.hh
StepWiseRNA_Clusterer.ccio / silent / SilentFileOptions.hh
StepWiseRNA_Clusterer.ccimport_pose / pose_stream / SilentFilePoseInputStream.hh
StepWiseRNA_Clusterer.ccio / silent / SilentStruct.hh
StepWiseRNA_Clusterer.cctypes.hh
StepWiseRNA_Clusterer.ccchemical / rna / util.hh
StepWiseRNA_Clusterer.ccpose / rna / util.hh
StepWiseRNA_Clusterer.ccpose / util.hh
StepWiseRNA_Clusterer.hhpose / Pose.fwd.hh
StepWiseRNA_Clusterer.hhpose / Pose.hh
StepWiseRNA_Clusterer.hhchemical / ResidueTypeSet.hh
StepWiseRNA_Clusterer.hhscoring / ScoreFunction.fwd.hh
StepWiseRNA_Clusterer.hhio / silent / SilentFileData.fwd.hh
StepWiseRNA_Clusterer.hhimport_pose / pose_stream / SilentFilePoseInputStream.fwd.hh
StepWiseRNA_Clusterer.hhio / silent / SilentStruct.fwd.hh
StepWiseRNA_Clusterer.hhtypes.hh
StepWiseRNA_Minimizer.ccid / AtomID.hh
StepWiseRNA_Minimizer.ccoptimization / AtomTreeMinimizer.hh
StepWiseRNA_Minimizer.ccchemical / AtomType.hh
StepWiseRNA_Minimizer.ccio / silent / BinarySilentStruct.hh
StepWiseRNA_Minimizer.ccoptimization / CartesianMinimizer.hh
StepWiseRNA_Minimizer.ccconformation / Conformation.hh
StepWiseRNA_Minimizer.ccscoring / Energies.hh
StepWiseRNA_Minimizer.ccscoring / EnergyGraph.hh
StepWiseRNA_Minimizer.ccscoring / EnergyMap.hh
StepWiseRNA_Minimizer.ccoptimization / MinimizerOptions.hh
StepWiseRNA_Minimizer.ccpose / Pose.hh
StepWiseRNA_Minimizer.ccscoring / rms_util.tmpl.hh
StepWiseRNA_Minimizer.ccscoring / rna / RNA_TorsionPotential.hh
StepWiseRNA_Minimizer.ccscoring / ScoreFunction.hh
StepWiseRNA_Minimizer.ccscoring / ScoreFunctionFactory.hh
StepWiseRNA_Minimizer.ccscoring / ScoreType.hh
StepWiseRNA_Minimizer.ccio / silent / SilentFileData.fwd.hh
StepWiseRNA_Minimizer.ccio / silent / SilentFileData.hh
StepWiseRNA_Minimizer.ccid / TorsionID.hh
StepWiseRNA_Minimizer.cctypes.hh
StepWiseRNA_Minimizer.ccchemical / util.hh
StepWiseRNA_Minimizer.ccchemical / rna / util.hh
StepWiseRNA_Minimizer.ccpose / util.hh
StepWiseRNA_Minimizer.ccchemical / VariantType.hh
StepWiseRNA_PoseSelection.ccpose / extra_pose_info_util.hh
StepWiseRNA_PoseSelection.ccpose / Pose.hh
StepWiseRNA_PoseSelection.ccscoring / ScoreFunction.hh
StepWiseRNA_PoseSelection.ccscoring / ScoreType.hh
StepWiseRNA_PoseSelection.ccpose / rna / util.hh
StepWiseRNA_PoseSelection.ccpose / variant_util.hh
StepWiseRNA_PoseSelection.hhpose / Pose.fwd.hh
StepWiseRNA_PoseSelection.hhtypes.hh
StepWiseRNA_PoseSetup.ccpose / annotated_sequence.hh
StepWiseRNA_PoseSetup.ccscoring / constraints / AtomPairConstraint.hh
StepWiseRNA_PoseSetup.ccio / silent / BinarySilentStruct.hh
StepWiseRNA_PoseSetup.ccchemical / ChemicalManager.hh
StepWiseRNA_PoseSetup.ccscoring / constraints / ConstraintSet.hh
StepWiseRNA_PoseSetup.ccscoring / func / FadeFunc.hh
StepWiseRNA_PoseSetup.cckinematics / FoldTree.hh
StepWiseRNA_PoseSetup.ccpose / full_model_info / FullModelInfo.hh
StepWiseRNA_PoseSetup.ccpose / full_model_info / FullModelParameters.hh
StepWiseRNA_PoseSetup.ccscoring / func / Func.fwd.hh
StepWiseRNA_PoseSetup.ccimport_pose / import_pose.hh
StepWiseRNA_PoseSetup.ccpose / PDBInfo.hh
StepWiseRNA_PoseSetup.ccpose / Pose.hh
StepWiseRNA_PoseSetup.ccconformation / Residue.hh
StepWiseRNA_PoseSetup.ccconformation / ResidueFactory.hh
StepWiseRNA_PoseSetup.ccchemical / ResidueType.hh
StepWiseRNA_PoseSetup.ccchemical / ResidueTypeSet.hh
StepWiseRNA_PoseSetup.ccscoring / rms_util.tmpl.hh
StepWiseRNA_PoseSetup.ccid / TorsionID.hh
StepWiseRNA_PoseSetup.cctypes.hh
StepWiseRNA_PoseSetup.ccpose / rna / util.hh
StepWiseRNA_PoseSetup.ccpose / copydofs / util.hh
StepWiseRNA_PoseSetup.ccpose / full_model_info / util.hh
StepWiseRNA_PoseSetup.ccchemical / rna / util.hh
StepWiseRNA_PoseSetup.ccchemical / util.hh
StepWiseRNA_PoseSetup.ccpose / variant_util.hh
StepWiseRNA_PoseSetup.ccchemical / VariantType.hh
StepWiseRNA_PoseSetup.hhpose / Pose.fwd.hh
StepWiseRNA_PoseSetup.hhchemical / ResidueTypeSet.fwd.hh
StepWiseRNA_PoseSetup.hhtypes.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / AA.hh
StepWiseRNA_PoseSetupFromCommandLine.cckinematics / tree / Atom.hh
StepWiseRNA_PoseSetupFromCommandLine.ccid / AtomID.hh
StepWiseRNA_PoseSetupFromCommandLine.ccid / AtomID_Map.hh
StepWiseRNA_PoseSetupFromCommandLine.ccoptimization / AtomTreeMinimizer.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / func / CharmmPeriodicFunc.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / ChemicalManager.hh
StepWiseRNA_PoseSetupFromCommandLine.ccconformation / Conformation.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / constraints / DihedralConstraint.hh
StepWiseRNA_PoseSetupFromCommandLine.ccid / DOF_ID.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / Energies.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / EnergyGraph.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / EnergyMap.fwd.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / EnergyMap.hh
StepWiseRNA_PoseSetupFromCommandLine.cckinematics / FoldTree.hh
StepWiseRNA_PoseSetupFromCommandLine.ccimport_pose / import_pose.hh
StepWiseRNA_PoseSetupFromCommandLine.ccinit / init.hh
StepWiseRNA_PoseSetupFromCommandLine.ccoptimization / MinimizerOptions.hh
StepWiseRNA_PoseSetupFromCommandLine.ccpose / MiniPose.hh
StepWiseRNA_PoseSetupFromCommandLine.cckinematics / MoveMap.hh
StepWiseRNA_PoseSetupFromCommandLine.ccpose / PDBInfo.hh
StepWiseRNA_PoseSetupFromCommandLine.ccpose / Pose.hh
StepWiseRNA_PoseSetupFromCommandLine.ccconformation / Residue.hh
StepWiseRNA_PoseSetupFromCommandLine.ccconformation / ResidueFactory.hh
StepWiseRNA_PoseSetupFromCommandLine.ccconformation / ResidueMatcher.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / ResidueTypeSet.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / rms_util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / rna / RNA_FittedTorsionInfo.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / ScoreFunction.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / ScoreFunctionFactory.hh
StepWiseRNA_PoseSetupFromCommandLine.ccscoring / ScoringManager.hh
StepWiseRNA_PoseSetupFromCommandLine.ccsequence / Sequence.hh
StepWiseRNA_PoseSetupFromCommandLine.ccio / silent / SilentFileData.hh
StepWiseRNA_PoseSetupFromCommandLine.ccimport_pose / pose_stream / SilentFilePoseInputStream.hh
StepWiseRNA_PoseSetupFromCommandLine.ccio / silent / SilentStruct.hh
StepWiseRNA_PoseSetupFromCommandLine.cctypes.hh
StepWiseRNA_PoseSetupFromCommandLine.ccio / silent / util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccpose / rna / util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccpose / util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccsequence / util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / rna / util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / util.hh
StepWiseRNA_PoseSetupFromCommandLine.ccchemical / VariantType.hh
StepWiseRNA_PoseSetupFromCommandLine.hhpose / Pose.fwd.hh
StepWiseRNA_PoseSetupFromCommandLine.hhscoring / ScoreFunction.fwd.hh
StepWiseRNA_PoseSetupFromCommandLine.hhtypes.hh
StepWiseRNA_WorkingParametersSetup.ccscoring / constraints / AtomPairConstraint.hh
StepWiseRNA_WorkingParametersSetup.ccchemical / ChemicalManager.hh
StepWiseRNA_WorkingParametersSetup.ccscoring / constraints / ConstraintSet.hh
StepWiseRNA_WorkingParametersSetup.ccscoring / func / FadeFunc.hh
StepWiseRNA_WorkingParametersSetup.cckinematics / FoldTree.hh
StepWiseRNA_WorkingParametersSetup.ccpose / Pose.hh
StepWiseRNA_WorkingParametersSetup.ccconformation / Residue.hh
StepWiseRNA_WorkingParametersSetup.ccchemical / ResidueTypeFinder.hh
StepWiseRNA_WorkingParametersSetup.ccchemical / ResidueTypeSet.hh
StepWiseRNA_WorkingParametersSetup.ccscoring / rms_util.tmpl.hh
StepWiseRNA_WorkingParametersSetup.ccid / TorsionID.hh
StepWiseRNA_WorkingParametersSetup.cctypes.hh
StepWiseRNA_WorkingParametersSetup.ccpose / rna / util.hh
StepWiseRNA_WorkingParametersSetup.ccpose / util.hh
StepWiseRNA_WorkingParametersSetup.ccchemical / rna / util.hh
StepWiseRNA_WorkingParametersSetup.ccchemical / util.hh
StepWiseRNA_WorkingParametersSetup.ccchemical / VariantType.hh
StepWiseRNA_WorkingParametersSetup.hhpose / Pose.fwd.hh
StepWiseRNA_WorkingParametersSetup.hhchemical / ResidueTypeSet.fwd.hh
StepWiseRNA_WorkingParametersSetup.hhtypes.hh
util.ccchemical / ChemicalManager.hh
util.ccpose / Pose.hh
util.ccconformation / Residue.hh
util.ccchemical / rna / RNA_FittedTorsionInfo.hh
util.ccsequence / util.hh
util.ccpose / rna / util.hh
util.ccchemical / rna / util.hh
util.hhkinematics / FoldTree.fwd.hh
util.hhpose / Pose.fwd.hh
util.hhtypes.hh
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