align → core Relation

File in src/protocols/stepwise/modeler/align	Includes file in src/core
StepWiseClusterer.cc	pose / extra_pose_info_util.hh
StepWiseClusterer.cc	pose / Pose.hh
StepWiseClusterer.cc	pose / util.hh
StepWiseClusterer.hh	pose / Pose.hh
StepWiseClusterer.hh	types.hh
StepWiseLegacyClusterer.cc	id / AtomID.hh
StepWiseLegacyClusterer.cc	chemical / ChemicalManager.hh
StepWiseLegacyClusterer.cc	pose / extra_pose_info_util.hh
StepWiseLegacyClusterer.cc	pose / Pose.hh
StepWiseLegacyClusterer.cc	import_pose / pose_stream / PoseInputStream.fwd.hh
StepWiseLegacyClusterer.cc	import_pose / pose_stream / PoseInputStream.hh
StepWiseLegacyClusterer.cc	chemical / ResidueTypeSet.hh
StepWiseLegacyClusterer.cc	scoring / rms_util.hh
StepWiseLegacyClusterer.cc	io / silent / SilentFileData.hh
StepWiseLegacyClusterer.cc	import_pose / pose_stream / SilentFilePoseInputStream.hh
StepWiseLegacyClusterer.cc	io / silent / SilentStruct.hh
StepWiseLegacyClusterer.cc	pose / subpose_manipulation_util.hh
StepWiseLegacyClusterer.cc	types.hh
StepWiseLegacyClusterer.cc	pose / util.hh
StepWiseLegacyClusterer.hh	pose / Pose.hh
StepWiseLegacyClusterer.hh	chemical / ResidueTypeSet.fwd.hh
StepWiseLegacyClusterer.hh	scoring / ScoreFunction.fwd.hh
StepWiseLegacyClusterer.hh	io / silent / SilentFileData.fwd.hh
StepWiseLegacyClusterer.hh	import_pose / pose_stream / SilentFilePoseInputStream.fwd.hh
StepWiseLegacyClusterer.hh	io / silent / SilentStruct.fwd.hh
StepWiseLegacyClusterer.hh	types.hh
StepWiseLegacyClustererSilentBased.cc	chemical / ChemicalManager.hh
StepWiseLegacyClustererSilentBased.cc	pose / extra_pose_info_util.hh
StepWiseLegacyClustererSilentBased.cc	pose / Pose.hh
StepWiseLegacyClustererSilentBased.cc	import_pose / pose_stream / PoseInputStream.hh
StepWiseLegacyClustererSilentBased.cc	chemical / ResidueTypeSet.hh
StepWiseLegacyClustererSilentBased.cc	scoring / rms_util.hh
StepWiseLegacyClustererSilentBased.cc	io / silent / SilentFileData.hh
StepWiseLegacyClustererSilentBased.cc	io / silent / SilentFileOptions.hh
StepWiseLegacyClustererSilentBased.cc	import_pose / pose_stream / SilentFilePoseInputStream.hh
StepWiseLegacyClustererSilentBased.cc	io / silent / SilentStruct.hh
StepWiseLegacyClustererSilentBased.cc	pose / subpose_manipulation_util.hh
StepWiseLegacyClustererSilentBased.cc	types.hh
StepWiseLegacyClustererSilentBased.cc	pose / util.hh
StepWiseLegacyClustererSilentBased.hh	id / AtomID.hh
StepWiseLegacyClustererSilentBased.hh	pose / Pose.fwd.hh
StepWiseLegacyClustererSilentBased.hh	chemical / ResidueTypeSet.fwd.hh
StepWiseLegacyClustererSilentBased.hh	scoring / ScoreFunction.fwd.hh
StepWiseLegacyClustererSilentBased.hh	io / silent / SilentFileData.fwd.hh
StepWiseLegacyClustererSilentBased.hh	import_pose / pose_stream / SilentFilePoseInputStream.fwd.hh
StepWiseLegacyClustererSilentBased.hh	io / silent / SilentStruct.fwd.hh
StepWiseLegacyClustererSilentBased.hh	types.hh
StepWisePoseAligner.cc	kinematics / tree / Atom.hh
StepWisePoseAligner.cc	kinematics / AtomTree.hh
StepWisePoseAligner.cc	scoring / constraints / ConstraintSet.hh
StepWisePoseAligner.cc	scoring / constraints / CoordinateConstraint.hh
StepWisePoseAligner.cc	scoring / func / FlatHarmonicFunc.hh
StepWisePoseAligner.cc	kinematics / FoldTree.hh
StepWisePoseAligner.cc	pose / full_model_info / FullModelInfo.hh
StepWisePoseAligner.cc	pose / full_model_info / FullModelParameters.hh
StepWisePoseAligner.cc	pose / Pose.hh
StepWisePoseAligner.cc	conformation / Residue.hh
StepWisePoseAligner.cc	chemical / ResidueType.hh
StepWisePoseAligner.cc	scoring / rms_util.hh
StepWisePoseAligner.cc	pose / rna / util.hh
StepWisePoseAligner.cc	pose / full_model_info / util.hh
StepWisePoseAligner.cc	conformation / util.hh
StepWisePoseAligner.cc	chemical / rna / util.hh
StepWisePoseAligner.cc	chemical / VariantType.hh
StepWisePoseAligner.hh	id / AtomID.hh
StepWisePoseAligner.hh	pose / Pose.fwd.hh
StepWisePoseAligner.hh	types.hh
util.cc	pose / full_model_info / FullModelInfo.hh
util.cc	pose / Pose.hh
util.cc	scoring / rms_util.hh
util.cc	pose / util.hh
util.hh	id / AtomID.hh
util.hh	id / AtomID_Map.hh
util.hh	pose / Pose.fwd.hh
util.hh	types.hh