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2021.16
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src
protocols
stepwise
monte_carlo
monte_carlo → core Relation
File in src/protocols/stepwise/monte_carlo
Includes file in src/core
mover
/
AddMover.cc
kinematics
/
FoldTree.hh
mover
/
AddMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
AddMover.cc
kinematics
/
Jump.hh
mover
/
AddMover.cc
pose
/
Pose.hh
mover
/
AddMover.cc
conformation
/
ResidueFactory.hh
mover
/
AddMover.cc
chemical
/
ResidueTypeSet.hh
mover
/
AddMover.cc
scoring
/
ScoreFunction.hh
mover
/
AddMover.cc
types.hh
mover
/
AddMover.cc
pose
/
full_model_info
/
util.hh
mover
/
AddMover.cc
chemical
/
rna
/
util.hh
mover
/
AddMover.cc
pose
/
variant_util.hh
mover
/
AddMover.cc
chemical
/
VariantType.hh
mover
/
AddMover.hh
pose
/
Pose.fwd.hh
mover
/
AddMover.hh
conformation
/
Residue.fwd.hh
mover
/
AddMover.hh
chemical
/
ResidueTypeSet.fwd.hh
mover
/
AddMover.hh
scoring
/
ScoreFunction.fwd.hh
mover
/
AddMover.hh
types.hh
mover
/
AddOrDeleteMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
AddOrDeleteMover.cc
pose
/
Pose.hh
mover
/
AddOrDeleteMover.cc
types.hh
mover
/
AddOrDeleteMover.cc
pose
/
util.hh
mover
/
AddOrDeleteMover.cc
pose
/
full_model_info
/
util.hh
mover
/
AddOrDeleteMover.cc
chemical
/
VariantType.hh
mover
/
AddOrDeleteMover.hh
pose
/
Pose.fwd.hh
mover
/
AddOrDeleteMover.hh
types.hh
mover
/
DeleteMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
DeleteMover.cc
pose
/
Pose.hh
mover
/
DeleteMover.cc
conformation
/
Residue.hh
mover
/
DeleteMover.cc
conformation
/
ResidueFactory.hh
mover
/
DeleteMover.cc
chemical
/
ResidueTypeSet.hh
mover
/
DeleteMover.cc
scoring
/
ScoreFunction.hh
mover
/
DeleteMover.cc
pose
/
full_model_info
/
SubMotifInfo.hh
mover
/
DeleteMover.cc
types.hh
mover
/
DeleteMover.cc
pose
/
full_model_info
/
util.hh
mover
/
DeleteMover.cc
pose
/
util.hh
mover
/
DeleteMover.cc
chemical
/
VariantType.hh
mover
/
DeleteMover.hh
pose
/
Pose.fwd.hh
mover
/
DeleteMover.hh
scoring
/
ScoreFunction.fwd.hh
mover
/
DeleteMover.hh
types.hh
mover
/
FromScratchMover.cc
pose
/
annotated_sequence.hh
mover
/
FromScratchMover.cc
chemical
/
ChemicalManager.hh
mover
/
FromScratchMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
FromScratchMover.cc
pose
/
Pose.hh
mover
/
FromScratchMover.cc
pose
/
full_model_info
/
util.hh
mover
/
FromScratchMover.cc
chemical
/
util.hh
mover
/
FromScratchMover.cc
pose
/
util.hh
mover
/
FromScratchMover.hh
pose
/
Pose.fwd.hh
mover
/
FromScratchMover.hh
types.hh
mover
/
ResampleMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
ResampleMover.cc
pose
/
Pose.hh
mover
/
ResampleMover.cc
scoring
/
ScoreFunction.hh
mover
/
ResampleMover.cc
pose
/
full_model_info
/
util.hh
mover
/
ResampleMover.cc
chemical
/
rna
/
util.hh
mover
/
ResampleMover.hh
pose
/
Pose.fwd.hh
mover
/
ResampleMover.hh
scoring
/
ScoreFunction.fwd.hh
mover
/
ResampleMover.hh
types.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
io
/
silent
/
BinarySilentStruct.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
pose
/
Pose.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
conformation
/
Residue.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
scoring
/
rms_util.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
scoring
/
ScoreFunction.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
io
/
silent
/
SilentFileData.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
io
/
silent
/
SilentFileOptions.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
io
/
silent
/
SilentStruct.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
id
/
types.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
types.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
pose
/
full_model_info
/
util.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
pose
/
util.hh
rna
/
RNA_AddDeleteMonteCarlo.cc
chemical
/
VariantType.hh
rna
/
RNA_AddDeleteMonteCarlo.hh
pose
/
Pose.fwd.hh
rna
/
RNA_AddDeleteMonteCarlo.hh
scoring
/
ScoreFunction.fwd.hh
rna
/
RNA_AddDeleteMonteCarlo.hh
io
/
silent
/
SilentFileData.fwd.hh
rna
/
RNA_AddDeleteMonteCarlo.hh
io
/
silent
/
SilentFileOptions.fwd.hh
rna
/
RNA_AddDeleteMonteCarlo.hh
types.hh
rna
/
RNA_O2PrimeMover.cc
scoring
/
Energies.hh
rna
/
RNA_O2PrimeMover.cc
scoring
/
EnergyGraph.hh
rna
/
RNA_O2PrimeMover.cc
pose
/
Pose.hh
rna
/
RNA_O2PrimeMover.cc
scoring
/
ScoreFunction.hh
rna
/
RNA_O2PrimeMover.cc
id
/
TorsionID.hh
rna
/
RNA_O2PrimeMover.cc
types.hh
rna
/
RNA_O2PrimeMover.cc
pose
/
full_model_info
/
util.hh
rna
/
RNA_O2PrimeMover.cc
pose
/
util.hh
rna
/
RNA_O2PrimeMover.cc
chemical
/
VariantType.hh
rna
/
RNA_O2PrimeMover.hh
pose
/
Pose.fwd.hh
rna
/
RNA_O2PrimeMover.hh
scoring
/
ScoreFunction.fwd.hh
rna
/
RNA_O2PrimeMover.hh
types.hh
rna
/
RNA_TorsionMover.cc
pose
/
Pose.hh
rna
/
RNA_TorsionMover.cc
conformation
/
ResidueFactory.hh
rna
/
RNA_TorsionMover.cc
chemical
/
ResidueTypeSet.hh
rna
/
RNA_TorsionMover.cc
id
/
TorsionID.hh
rna
/
RNA_TorsionMover.cc
types.hh
rna
/
RNA_TorsionMover.cc
chemical
/
rna
/
util.hh
rna
/
RNA_TorsionMover.cc
pose
/
util.hh
rna
/
RNA_TorsionMover.cc
pose
/
full_model_info
/
util.hh
rna
/
RNA_TorsionMover.cc
chemical
/
VariantType.hh
rna
/
RNA_TorsionMover.hh
pose
/
Pose.fwd.hh
rna
/
RNA_TorsionMover.hh
chemical
/
rna
/
RNA_FittedTorsionInfo.hh
rna
/
RNA_TorsionMover.hh
types.hh
mover
/
StepWiseMasterMover.cc
id
/
AtomID.hh
mover
/
StepWiseMasterMover.cc
chemical
/
ChemicalManager.hh
mover
/
StepWiseMasterMover.cc
pose
/
extra_pose_info_util.hh
mover
/
StepWiseMasterMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
StepWiseMasterMover.cc
pose
/
PDBInfo.hh
mover
/
StepWiseMasterMover.cc
import_pose
/
pose_stream
/
PDBPoseInputStream.hh
mover
/
StepWiseMasterMover.cc
pose
/
Pose.hh
mover
/
StepWiseMasterMover.cc
chemical
/
ResidueTypeSet.hh
mover
/
StepWiseMasterMover.cc
import_pose
/
pose_stream
/
SilentFilePoseInputStream.hh
mover
/
StepWiseMasterMover.cc
pose
/
full_model_info
/
util.hh
mover
/
StepWiseMasterMover.cc
pose
/
variant_util.hh
mover
/
StepWiseMasterMover.hh
scoring
/
ScoreFunction.fwd.hh
mover
/
StepWiseMasterMover.hh
types.hh
StepWiseMonteCarlo.cc
scoring
/
Energies.hh
StepWiseMonteCarlo.cc
scoring
/
EnergyGraph.hh
StepWiseMonteCarlo.cc
scoring
/
EnergyMap.fwd.hh
StepWiseMonteCarlo.cc
scoring
/
EnergyMap.hh
StepWiseMonteCarlo.cc
pose
/
extra_pose_info_util.hh
StepWiseMonteCarlo.cc
pose
/
full_model_info
/
FullModelInfo.hh
StepWiseMonteCarlo.cc
pose
/
Pose.hh
StepWiseMonteCarlo.cc
chemical
/
ResidueType.hh
StepWiseMonteCarlo.cc
scoring
/
ScoreFunction.hh
StepWiseMonteCarlo.cc
io
/
silent
/
SilentFileData.hh
StepWiseMonteCarlo.cc
io
/
silent
/
SilentFileOptions.hh
StepWiseMonteCarlo.cc
io
/
silent
/
util.hh
StepWiseMonteCarlo.cc
pose
/
full_model_info
/
util.hh
StepWiseMonteCarlo.cc
pose
/
util.hh
StepWiseMonteCarlo.cc
pose
/
rna
/
util.hh
StepWiseMonteCarlo.hh
pose
/
Pose.fwd.hh
StepWiseMonteCarlo.hh
scoring
/
ScoreFunction.fwd.hh
StepWiseMonteCarlo.hh
types.hh
options
/
StepWiseMonteCarloOptions.hh
types.hh
mover
/
StepWiseMove.cc
pose
/
full_model_info
/
FullModelParameters.hh
mover
/
StepWiseMove.hh
pose
/
full_model_info
/
FullModelParameters.fwd.hh
mover
/
StepWiseMove.hh
types.hh
mover
/
StepWiseMoveSelector.cc
kinematics
/
FoldTree.hh
mover
/
StepWiseMoveSelector.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
StepWiseMoveSelector.cc
scoring
/
loop_graph
/
LoopGraph.hh
mover
/
StepWiseMoveSelector.cc
pose
/
Pose.hh
mover
/
StepWiseMoveSelector.cc
pose
/
full_model_info
/
SubMotifInfo.hh
mover
/
StepWiseMoveSelector.cc
types.hh
mover
/
StepWiseMoveSelector.cc
pose
/
util.hh
mover
/
StepWiseMoveSelector.cc
pose
/
full_model_info
/
util.hh
mover
/
StepWiseMoveSelector.cc
chemical
/
rna
/
util.hh
mover
/
StepWiseMoveSelector.cc
chemical
/
VariantType.hh
mover
/
StepWiseMoveSelector.hh
pose
/
Pose.fwd.hh
mover
/
options
/
StepWiseMoveSelectorOptions.hh
types.hh
submotif
/
SubMotifLibrary.cc
chemical
/
AA.hh
submotif
/
SubMotifLibrary.cc
pose
/
annotated_sequence.hh
submotif
/
SubMotifLibrary.cc
chemical
/
ChemicalManager.hh
submotif
/
SubMotifLibrary.cc
pose
/
extra_pose_info_util.hh
submotif
/
SubMotifLibrary.cc
pose
/
full_model_info
/
FullModelInfo.hh
submotif
/
SubMotifLibrary.cc
import_pose
/
import_pose.hh
submotif
/
SubMotifLibrary.cc
kinematics
/
Jump.hh
submotif
/
SubMotifLibrary.cc
pose
/
Pose.hh
submotif
/
SubMotifLibrary.cc
chemical
/
ResidueTypeFinder.hh
submotif
/
SubMotifLibrary.cc
chemical
/
ResidueTypeSet.hh
submotif
/
SubMotifLibrary.cc
import_pose
/
libraries
/
RNA_JumpLibrary.hh
submotif
/
SubMotifLibrary.cc
import_pose
/
libraries
/
RNA_LibraryManager.hh
submotif
/
SubMotifLibrary.cc
pose
/
full_model_info
/
util.hh
submotif
/
SubMotifLibrary.cc
pose
/
rna
/
util.hh
submotif
/
SubMotifLibrary.cc
pose
/
variant_util.hh
submotif
/
SubMotifLibrary.hh
pose
/
Pose.fwd.hh
submotif
/
SubMotifLibrary.hh
chemical
/
ResidueTypeSet.fwd.hh
mover
/
TransientCutpointHandler.cc
pose
/
Pose.hh
mover
/
TransientCutpointHandler.cc
scoring
/
ScoreFunction.hh
mover
/
TransientCutpointHandler.cc
id
/
TorsionID.hh
mover
/
TransientCutpointHandler.cc
types.hh
mover
/
TransientCutpointHandler.cc
pose
/
rna
/
util.hh
mover
/
TransientCutpointHandler.cc
chemical
/
rna
/
util.hh
mover
/
TransientCutpointHandler.cc
pose
/
variant_util.hh
mover
/
TransientCutpointHandler.cc
chemical
/
VariantType.hh
mover
/
TransientCutpointHandler.hh
kinematics
/
FoldTree.hh
mover
/
TransientCutpointHandler.hh
pose
/
Pose.fwd.hh
mover
/
TransientCutpointHandler.hh
types.hh
util.cc
io
/
silent
/
BinarySilentStruct.hh
util.cc
pose
/
extra_pose_info_util.hh
util.cc
pose
/
full_model_info
/
FullModelInfo.hh
util.cc
pose
/
Pose.hh
util.cc
scoring
/
rms_util.hh
util.cc
scoring
/
ScoreFunction.hh
util.cc
io
/
silent
/
SilentFileData.hh
util.cc
io
/
silent
/
SilentFileOptions.hh
util.cc
io
/
silent
/
SilentStruct.hh
util.cc
types.hh
util.cc
chemical
/
rna
/
util.hh
util.cc
pose
/
rna
/
util.hh
util.cc
pose
/
full_model_info
/
util.hh
util.cc
io
/
silent
/
util.hh
util.hh
pose
/
Pose.fwd.hh
util.hh
io
/
silent
/
SilentStruct.fwd.hh
util.hh
types.hh
mover
/
VaryLoopLengthMover.cc
pose
/
full_model_info
/
FullModelInfo.hh
mover
/
VaryLoopLengthMover.cc
pose
/
full_model_info
/
FullModelParameters.hh
mover
/
VaryLoopLengthMover.cc
pose
/
Pose.hh
mover
/
VaryLoopLengthMover.cc
pose
/
full_model_info
/
util.hh
mover
/
VaryLoopLengthMover.hh
pose
/
full_model_info
/
FullModelParameters.fwd.hh
mover
/
VaryLoopLengthMover.hh
pose
/
Pose.fwd.hh
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