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topology_broker → core Relation

File in src/protocols/topology_brokerIncludes file in src/core
weights / AbinitioMoverWeight.hhtypes.hh
AsymFoldandDockClaimer.ccconformation / Conformation.hh
AsymFoldandDockClaimer.ccpose / PDBInfo.hh
AsymFoldandDockClaimer.hhpose / Pose.hh
AsymFoldandDockClaimer.hhscoring / ScoreFunction.fwd.hh
AsymFoldandDockClaimer.hhtypes.hh
BasicJumpClaimer.cckinematics / FoldTree.hh
BasicJumpClaimer.cckinematics / Jump.hh
BasicJumpClaimer.ccpose / Pose.hh
claims / BBClaim.hhkinematics / MoveMap.hh
claims / BBClaim.hhtypes.hh
ClaimerMessage.hhtypes.hh
weights / ConstAbinitioMoverWeight.hhtypes.hh
ConstraintClaimer.ccscoring / constraints / ConstraintIO.hh
ConstraintClaimer.ccid / Exceptions.hh
ConstraintClaimer.ccpose / Pose.hh
ConstraintClaimer.ccid / SequenceMapping.hh
ConstraintClaimer.cckinematics / ShortestPathInFoldTree.hh
ConstraintClaimer.ccscoring / constraints / util.hh
ConstraintClaimer.hhscoring / constraints / ConstraintSet.hh
ConstraintClaimer.hhpose / Pose.hh
ConstraintEvaluatorWrapper.ccpose / Pose.hh
ConstraintEvaluatorWrapper.ccscoring / ScoreFunction.hh
ConstraintEvaluatorWrapper.ccid / SequenceMapping.hh
ConstraintEvaluatorWrapper.hhpose / Pose.fwd.hh
ConstraintEvaluatorWrapperCreator.ccio / silent / silent.fwd.hh
ConstraintEvaluatorWrapperCreator.ccio / silent / SilentStruct.hh
ConstraintEvaluatorWrapperCreator.hhtypes.hh
CoordConstraintClaimer.ccchemical / ChemicalManager.hh
CoordConstraintClaimer.ccscoring / constraints / ConstraintIO.hh
CoordConstraintClaimer.ccscoring / constraints / CoordinateConstraint.hh
CoordConstraintClaimer.ccscoring / func / FuncFactory.hh
CoordConstraintClaimer.ccimport_pose / import_pose.hh
CoordConstraintClaimer.ccscoring / constraints / LocalCoordinateConstraint.hh
CoordConstraintClaimer.ccid / NamedStubID.hh
CoordConstraintClaimer.ccpose / Pose.hh
CoordConstraintClaimer.ccchemical / ResidueType.hh
CoordConstraintClaimer.ccid / SequenceMapping.hh
CoordConstraintClaimer.ccpose / util.hh
CoordConstraintClaimer.hhscoring / constraints / ConstraintSet.hh
CoordConstraintClaimer.hhpose / Pose.hh
CutBiasClaimer.ccfragment / SecondaryStructure.hh
CutBiasClaimer.hhfragment / SecondaryStructure.fwd.hh
claims / CutClaim.hhkinematics / MoveMap.hh
claims / CutClaim.hhtypes.hh
DensityScoringClaimer.hhkinematics / Jump.hh
DensityScoringClaimer.hhkinematics / MoveMap.hh
DensityScoringClaimer.hhpose / Pose.fwd.hh
DisulfJumpClaimer.ccfragment / FragData.fwd.hh
DisulfJumpClaimer.ccfragment / FragSet.hh
DisulfJumpClaimer.ccfragment / FrameList.hh
DisulfJumpClaimer.ccfragment / JumpingFrame.hh
DisulfJumpClaimer.cckinematics / MoveMap.hh
DisulfJumpClaimer.ccfragment / OrderedFragSet.hh
DisulfJumpClaimer.ccpose / Pose.hh
DisulfJumpClaimer.hhfragment / Frame.fwd.hh
DisulfJumpClaimer.hhfragment / FrameList.hh
DisulfJumpClaimer.hhkinematics / MoveMap.fwd.hh
DisulfJumpClaimer.hhpose / Pose.fwd.hh
claims / DofClaim.hhkinematics / MoveMap.hh
claims / DofClaim.hhtypes.hh
FibrilModelingClaimer.ccchemical / ChemicalManager.hh
FibrilModelingClaimer.ccconformation / Conformation.hh
FibrilModelingClaimer.cckinematics / FoldTree.hh
FibrilModelingClaimer.ccimport_pose / import_pose.hh
FibrilModelingClaimer.ccpose / Pose.hh
FibrilModelingClaimer.ccconformation / symmetry / util.hh
FibrilModelingClaimer.ccpose / symmetry / util.hh
FibrilModelingClaimer.hhpose / Pose.hh
FibrilModelingClaimer.hhconformation / symmetry / SymmetryInfo.hh
FoldandDockClaimer.ccchemical / AtomType.hh
FoldandDockClaimer.ccconformation / Conformation.hh
FoldandDockClaimer.cckinematics / FoldTree.hh
FoldandDockClaimer.ccpose / symmetry / util.hh
FoldandDockClaimer.hhpose / Pose.hh
FoldandDockClaimer.hhscoring / ScoreFunction.fwd.hh
FoldandDockClaimer.hhtypes.hh
FragmentClaimer.cckinematics / Exceptions.hh
FragmentClaimer.ccfragment / FragSet.hh
FragmentClaimer.ccfragment / FrameIterator.hh
FragmentClaimer.cckinematics / MoveMap.hh
FragmentClaimer.ccpose / Pose.hh
FragmentClaimer.cckinematics / util.hh
FragmentClaimer.hhfragment / FragSet.fwd.hh
FragmentClaimer.hhkinematics / MoveMap.fwd.hh
FragmentClaimer.hhpose / Pose.fwd.hh
FragmentJumpClaimer.ccfragment / FragSet.hh
FragmentJumpClaimer.ccfragment / Frame.hh
FragmentJumpClaimer.ccfragment / FrameList.hh
FragmentJumpClaimer.cckinematics / MoveMap.hh
FragmentJumpClaimer.ccfragment / OrderedFragSet.hh
FragmentJumpClaimer.ccpose / Pose.hh
FragmentJumpClaimer.hhpose / Pose.hh
claims / JumpClaim.hhkinematics / MoveMap.hh
claims / JumpClaim.hhtypes.hh
weights / LargeFragWeight.hhtypes.hh
claims / LegacyRootClaim.hhkinematics / MoveMap.hh
claims / LegacyRootClaim.hhtypes.hh
LoopFragmentClaimer.ccfragment / FragSet.hh
LoopFragmentClaimer.cckinematics / MoveMap.hh
LoopFragmentClaimer.hhkinematics / MoveMap.hh
LoopFragmentClaimer.hhpose / Pose.fwd.hh
MembraneTopologyClaimer.ccpose / datacache / CacheableDataType.hh
MembraneTopologyClaimer.ccchemical / ChemicalManager.hh
MembraneTopologyClaimer.cckinematics / FoldTree.hh
MembraneTopologyClaimer.ccscoring / MembraneTopology.hh
MembraneTopologyClaimer.ccpose / Pose.hh
MembraneTopologyClaimer.ccconformation / Residue.hh
MembraneTopologyClaimer.ccconformation / ResidueFactory.hh
MembraneTopologyClaimer.ccchemical / ResidueTypeSet.hh
MembraneTopologyClaimer.ccpose / symmetry / util.hh
MembraneTopologyClaimer.hhpose / Pose.hh
MetalloClaimer.ccchemical / ChemicalManager.hh
MetalloClaimer.ccpose / Pose.hh
MetalloClaimer.ccchemical / ResidueType.hh
MetalloClaimer.ccchemical / ResidueTypeSet.hh
MetalloClaimer.hhkinematics / MoveMap.hh
MetalloClaimer.hhpose / Pose.fwd.hh
PcsEnergyController.hhpose / Pose.fwd.hh
PcsEnergyController.hhscoring / ScoreFunction.fwd.hh
PseudocontactShiftEnergyController.ccscoring / constraints / Constraint.fwd.hh
PseudocontactShiftEnergyController.ccscoring / methods / EnergyMethod.hh
PseudocontactShiftEnergyController.ccscoring / ScoreType.hh
PseudocontactShiftEnergyController.hhpose / Pose.fwd.hh
PseudocontactShiftEnergyController.hhscoring / ScoreFunction.fwd.hh
PseudocontactShiftEnergyController_Ts1.ccscoring / methods / EnergyMethod.hh
PseudocontactShiftEnergyController_Ts1.ccscoring / ScoreType.hh
PseudocontactShiftEnergyController_Ts1.hhscoring / constraints / Constraint.hh
PseudocontactShiftEnergyController_Ts1.hhpose / Pose.fwd.hh
PseudocontactShiftEnergyController_Ts1.hhscoring / ScoreFunction.fwd.hh
PseudocontactShiftEnergyController_Ts2.ccscoring / methods / EnergyMethod.hh
PseudocontactShiftEnergyController_Ts2.ccscoring / ScoreType.hh
PseudocontactShiftEnergyController_Ts2.hhscoring / constraints / Constraint.hh
PseudocontactShiftEnergyController_Ts2.hhpose / Pose.fwd.hh
PseudocontactShiftEnergyController_Ts2.hhscoring / ScoreFunction.fwd.hh
PseudocontactShiftEnergyController_Ts3.ccscoring / methods / EnergyMethod.hh
PseudocontactShiftEnergyController_Ts3.ccscoring / ScoreType.hh
PseudocontactShiftEnergyController_Ts3.hhscoring / constraints / Constraint.hh
PseudocontactShiftEnergyController_Ts3.hhpose / Pose.fwd.hh
PseudocontactShiftEnergyController_Ts3.hhscoring / ScoreFunction.fwd.hh
PseudocontactShiftEnergyController_Ts4.ccscoring / methods / EnergyMethod.hh
PseudocontactShiftEnergyController_Ts4.ccscoring / ScoreType.hh
PseudocontactShiftEnergyController_Ts4.hhscoring / constraints / Constraint.hh
PseudocontactShiftEnergyController_Ts4.hhpose / Pose.fwd.hh
PseudocontactShiftEnergyController_Ts4.hhscoring / ScoreFunction.fwd.hh
RigidBodyRandomTMHMover.ccconformation / Conformation.hh
RigidBodyRandomTMHMover.cckinematics / FoldTree.hh
RigidBodyRandomTMHMover.cckinematics / MoveMap.hh
RigidBodyRandomTMHMover.ccpose / PDBInfo.hh
RigidBodyRandomTMHMover.ccpose / Pose.hh
RigidBodyRandomTMHMover.ccconformation / Residue.hh
RigidBodyRandomTMHMover.ccid / TorsionID_Range.hh
RigidBodyRandomTMHMover.hhkinematics / MoveMap.fwd.hh
RigidBodyRandomTMHMover.hhpose / Pose.fwd.hh
RigidBodyRandomTMHMover.hhconformation / symmetry / SymDof.hh
RigidBodyRandomTMHMover.hhtypes.hh
RigidChunkClaimer.cckinematics / tree / Atom.hh
RigidChunkClaimer.cckinematics / AtomTree.hh
RigidChunkClaimer.ccchemical / ChemicalManager.hh
RigidChunkClaimer.ccconformation / Conformation.hh
RigidChunkClaimer.ccid / DOF_ID.hh
RigidChunkClaimer.cckinematics / FoldTree.hh
RigidChunkClaimer.ccimport_pose / import_pose.hh
RigidChunkClaimer.ccpose / Pose.hh
RigidChunkClaimer.ccsequence / SequenceAlignment.hh
RigidChunkClaimer.ccutil / SwitchResidueTypeSet.hh
RigidChunkClaimer.ccpose / variant_util.hh
RigidChunkClaimer.ccchemical / VariantType.hh
RigidChunkClaimer.hhpose / Pose.hh
claims / SequenceClaim.hhsequence / AnnotatedSequence.hh
claims / SequenceClaim.hhkinematics / MoveMap.hh
claims / SequenceClaim.hhtypes.hh
SequenceClaimer.ccpose / annotated_sequence.hh
SequenceClaimer.ccchemical / ChemicalManager.hh
SequenceClaimer.ccpose / Pose.hh
SequenceClaimer.ccconformation / Residue.hh
SequenceClaimer.ccsequence / Sequence.hh
SequenceClaimer.ccsequence / util.hh
SequenceClaimer.hhsequence / Sequence.hh
SequenceNumberResolver.hhtypes.hh
weights / SmallFragWeight.hhtypes.hh
weights / SmoothFragWeight.hhtypes.hh
StartStructClaimer.ccfragment / BBTorsionSRFD.hh
StartStructClaimer.ccchemical / ChemicalManager.hh
StartStructClaimer.ccfragment / ConstantLengthFragSet.hh
StartStructClaimer.ccfragment / FragData.hh
StartStructClaimer.ccfragment / FragSet.hh
StartStructClaimer.ccimport_pose / import_pose.hh
StartStructClaimer.ccpose / Pose.hh
StartStructClaimer.ccfragment / util.hh
StartStructClaimer.hhkinematics / MoveMap.hh
StartStructClaimer.hhpose / Pose.hh
claims / SymmetryClaim.hhkinematics / MoveMap.hh
claims / SymmetryClaim.hhconformation / symmetry / SymmData.hh
claims / SymmetryClaim.hhtypes.hh
SymmetryClaimer.ccpose / annotated_sequence.hh
SymmetryClaimer.ccchemical / ChemicalManager.hh
SymmetryClaimer.ccpose / Pose.hh
SymmetryClaimer.ccconformation / Residue.hh
SymmetryClaimer.ccconformation / ResidueFactory.hh
SymmetryClaimer.ccchemical / ResidueType.hh
SymmetryClaimer.ccutil / SwitchResidueTypeSet.hh
SymmetryClaimer.ccconformation / symmetry / SymmData.hh
SymmetryClaimer.ccpose / util.hh
SymmetryClaimer.ccconformation / symmetry / util.hh
SymmetryClaimer.ccchemical / VariantType.hh
SymmetryClaimer.ccconformation / symmetry / VirtualCoordinate.hh
SymmetryClaimer.hhpose / Pose.hh
TemplateFragmentClaimer.ccfragment / BBTorsionSRFD.hh
TemplateFragmentClaimer.ccfragment / ConstantLengthFragSet.hh
TemplateFragmentClaimer.ccfragment / FragData.hh
TemplateFragmentClaimer.ccfragment / FragSet.hh
TemplateFragmentClaimer.ccfragment / FrameList.hh
TemplateFragmentClaimer.cckinematics / MoveMap.hh
TemplateFragmentClaimer.ccpose / Pose.hh
TemplateFragmentClaimer.hhpose / Pose.fwd.hh
TemplateJumpClaimer.ccfragment / FragSet.hh
TemplateJumpClaimer.cckinematics / MoveMap.hh
TemplateJumpClaimer.ccscoring / dssp / PairingsList.hh
TemplateJumpClaimer.ccpose / Pose.hh
TemplateJumpClaimer.ccfragment / SecondaryStructure.hh
TemplateJumpClaimer.hhscoring / dssp / PairingsList.hh
TemplateJumpClaimer.hhpose / Pose.fwd.hh
TemplateJumpClaimer.hhfragment / SecondaryStructure.hh
TMHTopologySamplerClaimer.ccpose / datacache / CacheableDataType.hh
TMHTopologySamplerClaimer.ccconformation / Conformation.hh
TMHTopologySamplerClaimer.cckinematics / FoldTree.hh
TMHTopologySamplerClaimer.cckinematics / Jump.hh
TMHTopologySamplerClaimer.ccscoring / MembranePotential.hh
TMHTopologySamplerClaimer.ccscoring / MembraneTopology.hh
TMHTopologySamplerClaimer.ccpose / Pose.hh
TMHTopologySamplerClaimer.ccconformation / Residue.hh
TMHTopologySamplerClaimer.ccconformation / ResidueFactory.hh
TMHTopologySamplerClaimer.ccchemical / ResidueTypeSet.hh
TMHTopologySamplerClaimer.ccscoring / ScoringManager.hh
TMHTopologySamplerClaimer.cckinematics / Stub.hh
TMHTopologySamplerClaimer.cctypes.hh
TMHTopologySamplerClaimer.ccpose / util.hh
TMHTopologySamplerClaimer.hhkinematics / FoldTree.hh
TMHTopologySamplerClaimer.hhscoring / MembranePotential.hh
TMHTopologySamplerClaimer.hhscoring / MembraneTopology.hh
TMHTopologySamplerClaimer.hhpose / Pose.hh
TMHTopologySamplerClaimer.hhtypes.hh
TopologyBroker.ccpose / annotated_sequence.hh
TopologyBroker.ccoptimization / AtomTreeMinimizer.hh
TopologyBroker.ccchemical / ChemicalManager.hh
TopologyBroker.ccconformation / Conformation.hh
TopologyBroker.ccscoring / constraints / ConstraintSet.hh
TopologyBroker.ccio / raw_data / DisulfideFile.hh
TopologyBroker.ccscoring / dssp / Dssp.hh
TopologyBroker.cckinematics / Exceptions.hh
TopologyBroker.cckinematics / FoldTree.hh
TopologyBroker.ccoptimization / MinimizerOptions.hh
TopologyBroker.cckinematics / MoveMap.hh
TopologyBroker.ccpack / task / PackerTask.hh
TopologyBroker.ccpose / Pose.hh
TopologyBroker.ccconformation / Residue.hh
TopologyBroker.ccscoring / ScoreFunction.hh
TopologyBroker.ccscoring / ScoreFunctionFactory.hh
TopologyBroker.ccid / SequenceMapping.hh
TopologyBroker.cckinematics / ShortestPathInFoldTree.hh
TopologyBroker.ccutil / SwitchResidueTypeSet.hh
TopologyBroker.ccoptimization / symmetry / SymAtomTreeMinimizer.hh
TopologyBroker.ccpack / task / TaskFactory.hh
TopologyBroker.ccpose / symmetry / util.hh
TopologyBroker.ccpose / variant_util.hh
TopologyBroker.ccchemical / VariantType.hh
TopologyBroker.hhkinematics / FoldTree.fwd.hh
TopologyBroker.hhkinematics / FoldTree.hh
TopologyBroker.hhfragment / FragSet.fwd.hh
TopologyBroker.hhkinematics / MoveMap.fwd.hh
TopologyBroker.hhpose / Pose.fwd.hh
TopologyBroker.hhscoring / ScoreFunction.fwd.hh
TopologyBroker.hhkinematics / ShortestPathInFoldTree.fwd.hh
TopologyBroker.hhconformation / symmetry / SymmData.hh
TopologyClaimer.hhkinematics / FoldTree.hh
TopologyClaimer.hhfragment / FragSet.hh
TopologyClaimer.hhkinematics / MoveMap.fwd.hh
TopologyClaimer.hhpose / Pose.hh
TopologyClaimer.hhscoring / ScoreFunction.fwd.hh
TopologyClaimer.hhtypes.hh
util.ccchemical / ChemicalManager.fwd.hh
util.ccfragment / FragmentIO.hh
util.ccfragment / FragSet.hh
util.ccimport_pose / import_pose.hh
util.ccpose / PDBInfo.hh
util.ccfragment / SecondaryStructure.hh
util.ccsequence / Sequence.hh
util.ccsequence / util.hh
util.ccfragment / util.hh
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