Rosetta  2021.16
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energy_methods → chemical Relation

File in src/core/energy_methodsIncludes file in src/core/chemical
AACompositionEnergy.ccResidueType.hh
AACompositionEnergy.hhResidueProperty.hh
AARepeatEnergy.ccResidueType.hh
AbegoEnergy.ccAA.hh
ArgCationPiEnergy.hhResidueType.hh
AromaticBackboneRestraintEnergy.ccAA.hh
AromaticBackboneRestraintEnergy.ccVariantType.hh
AspartimidePenaltyEnergy.ccAA.hh
AspartimidePenaltyEnergy.ccAtomType.hh
AspartimidePenaltyEnergy.ccChemicalManager.fwd.hh
AspartimidePenaltyEnergy.ccResidueConnection.hh
AspartimidePenaltyEnergy.ccResidueType.hh
AspartimidePenaltyEnergy.ccResidueTypeSet.hh
AspartimidePenaltyEnergy.ccVariantType.hh
AspartimidePenaltyEnergy.hhAA.hh
AspartimidePenaltyEnergy.hhResidueType.fwd.hh
BranchEnergy.ccVariantType.hh
CartesianBondedEnergy.ccAA.hh
CartesianBondedEnergy.ccAtomType.hh
CartesianBondedEnergy.ccChemicalManager.fwd.hh
CartesianBondedEnergy.ccElement.hh
CartesianBondedEnergy.ccPatch.hh
CartesianBondedEnergy.ccResidueConnection.hh
CartesianBondedEnergy.ccResidueType.hh
CartesianBondedEnergy.ccResidueTypeSet.hh
CartesianBondedEnergy.ccRestypeDestructionEvent.hh
CartesianBondedEnergy.ccrings / RingConformerSet.hh
CartesianBondedEnergy.ccVariantType.hh
CartesianBondedEnergy.hhcarbohydrates / CarbohydrateInfo.hh
CartesianBondedEnergy.hhResidueType.fwd.hh
CartesianBondedEnergy.hhRestypeDestructionEvent.fwd.hh
CartesianBondedEnergy.hhrings / RingConformer.hh
CenPairEnergy.ccVariantType.hh
CenRotEnvEnergy.ccVariantType.hh
CenRotPairEnergy.ccAA.hh
CenRotPairEnergy.ccVariantType.hh
CentroidDisulfideEnergy.ccChemicalManager.fwd.hh
CentroidDisulfideEnergy.ccResidueTypeSet.hh
CentroidDisulfideEnergy.ccVariantType.hh
ChainbreakEnergy.ccVariantType.hh
ContextIndependentGeometricSolEnergy.ccrna / util.hh
CovalentLabelingEnergy.ccAtomType.hh
CovalentLabelingEnergy.hhAtomType.hh
CovalentLabelingFAEnergy.ccAtomType.hh
CovalentLabelingFAEnergy.hhAtomType.hh
D2H_SA_Energy.ccAtomType.hh
D2H_SA_Energy.ccResidueType.hh
DEEREnergy.ccAA.hh
DEEREnergy.ccAtomType.hh
DFIRE_Energy.ccResidueType.hh
DistanceChainbreakEnergy.ccVariantType.hh
DisulfideMatchingEnergy.ccVariantType.hh
DNA_DihedralEnergy.ccVariantType.hh
DNA_ReferenceEnergy.hhAA.hh
ElecDensAllAtomCenEnergy.ccAA.hh
ElecDensAllAtomCenEnergy.ccAtomType.hh
ElecDensAtomwiseEnergy.ccAA.hh
ElecDensAtomwiseEnergy.ccAtomType.hh
ElecDensCenEnergy.ccAA.hh
ElecDensEnergy.ccAA.hh
ElecDensEnergy.ccAtomType.hh
EnvEnergy.ccVariantType.hh
EnvSmoothEnergy.ccAA.hh
EnvSmoothEnergy.ccVariantType.hh
EnvSmoothEnergy.hhAA.hh
ExactOccludedHbondSolEnergy.ccAtomType.hh
ExactOccludedHbondSolEnergy.ccAtomTypeSet.hh
ExactOccludedHbondSolEnergy.ccChemicalManager.hh
ExactOccludedHbondSolEnergy.ccResConnID.hh
ExactOccludedHbondSolEnergy.ccResidueType.hh
ExactOccludedHbondSolEnergy.hhAtomTypeSet.fwd.hh
FA_ElecEnergyAroAll.ccAtomType.hh
FA_ElecEnergyAroAro.ccAtomType.hh
FA_GrpElecEnergy.ccResidueType.fwd.hh
FA_GrpElecEnergy.ccResidueTypeSet.fwd.hh
FA_GrpElecEnergy.hhAtomType.hh
FA_GrpElecEnergy.hhResidueType.fwd.hh
FACTSEnergy.ccAtomType.hh
FaMPEnvSmoothEnergy.ccAA.hh
FaMPEnvSmoothEnergy.hhAA.hh
FastDensEnergy.ccAA.hh
FastDensEnergy.ccAtomType.hh
FastSAXSEnergy.ccAA.hh
FastSAXSEnergy.ccAtomType.hh
FastSAXSEnergy.hhAA.hh
FiberDiffractionEnergy.ccAtomType.hh
FiberDiffractionEnergy.ccAtomTypeSet.hh
FiberDiffractionEnergy.hhAA.hh
FiberDiffractionEnergy.hhChemicalManager.hh
FiberDiffractionEnergyDens.ccAtomType.hh
FiberDiffractionEnergyDens.ccAtomTypeSet.hh
FiberDiffractionEnergyDens.hhAA.hh
FiberDiffractionEnergyDens.hhChemicalManager.hh
FreeDOF_Energy.ccResidueType.hh
FreeDOF_Energy.ccrna / RNA_Info.hh
FullatomDisulfideEnergy.ccVariantType.hh
GaussianOverlapEnergy.ccAA.hh
GaussianOverlapEnergy.ccAtomType.hh
GaussianOverlapEnergy.ccVariantType.hh
GenericBondedEnergy.ccAtomType.hh
GenericBondedEnergy.ccChemicalManager.hh
GenericBondedEnergy.ccResidueTypeSet.hh
GenericBondedEnergy.hhResidueType.hh
GenericBondedEnergy.hhResidueTypeSet.fwd.hh
GoapEnergy.ccChemicalManager.hh
GoapEnergy.ccResidueTypeSet.hh
GoapEnergy.fwd.hhResidueType.hh
HRF_MSLabelingEnergy.ccAtomType.hh
HRF_MSLabelingEnergy.hhAtomType.hh
HRFDynamicsEnergy.ccAtomType.hh
HRFDynamicsEnergy.hhAtomType.hh
HybridVDW_Energy.ccChemicalManager.fwd.hh
HybridVDW_Energy.ccResidueTypeSet.hh
LinearBranchEnergy.ccVariantType.hh
LinearChainbreakEnergy.ccVariantType.hh
LK_hack.ccAtomType.hh
LK_hack.ccResidueConnection.hh
LK_PolarNonPolarEnergy.ccAtomType.hh
LK_PolarNonPolarEnergy.ccResidueConnection.hh
LK_PolarNonPolarEnergy.ccrna / util.hh
MembraneEnvSmoothEnergy.ccAA.hh
MembraneEnvSmoothEnergy.hhAA.hh
MgEnergy.ccAtomType.hh
MHCEpitopeEnergy.ccResidueType.hh
MHCEpitopeEnergy.hhResidueProperty.hh
MotifDockEnergy.ccAA.hh
MotifDockEnergy.ccVariantType.hh
MPEnvEnergy.ccAA.hh
MPEnvEnergy.hhAA.hh
MPHelicalityEnergy.ccAA.hh
MPHelicalityEnergy.hhAA.hh
MPPairEnergy.ccAA.hh
MPPairEnergy.ccVariantType.hh
MPPairEnergy.hhAA.hh
MPResidueLipophilicityEnergy.ccAA.hh
MPResidueLipophilicityEnergy.hhAA.hh
NetChargeEnergy.ccResidueType.hh
NetChargeEnergy.hhResidueProperty.hh
non_scorefxn_exact_model.ccAtomType.hh
non_scorefxn_exact_model.ccChemicalManager.hh
NPDHBondEnergy.ccAtomType.hh
NPDHBondEnergy.ccAtomTypeSet.hh
NPDHBondEnergy.ccrna / RNA_Info.hh
OccludedHbondSolEnergy.ccAtomType.hh
OccludedHbondSolEnergy.ccAtomTypeSet.hh
OccludedHbondSolEnergy.ccChemicalManager.hh
OccludedHbondSolEnergy.hhAtomTypeSet.fwd.hh
OccludedHbondSolEnergy_onebody.ccAtomType.hh
OmegaTetherEnergy.ccVariantType.hh
P_AA_pp_Energy.ccVariantType.hh
PairEnergy.ccVariantType.hh
pHEnergy.ccVariantType.hh
PointWaterEnergy.ccAA.hh
PointWaterEnergy.hhAtomType.hh
ProClosureEnergy.ccResidueConnection.hh
ProQ_Energy.ccAA.hh
ProQ_Energy.ccAtomType.hh
ProQ_Energy.ccResidueType.hh
RamachandranEnergy.ccAA.hh
RamachandranEnergy.ccVariantType.hh
RamaPreProEnergy.ccAA.hh
RamaPreProEnergy.ccAtomType.hh
RamaPreProEnergy.ccChemicalManager.fwd.hh
RamaPreProEnergy.ccResidueConnection.hh
RamaPreProEnergy.ccResidueType.hh
RamaPreProEnergy.ccResidueTypeSet.hh
RamaPreProEnergy.ccVariantType.hh
RamaPreProEnergy.hhResidueType.fwd.hh
ReferenceEnergy.ccAA.hh
ReferenceEnergy.ccVariantType.hh
ReferenceEnergy.hhAA.hh
ReferenceEnergyNoncanonical.ccAA.hh
ReferenceEnergyNoncanonical.ccResidueProperties.hh
ReferenceEnergyNoncanonical.ccVariantType.hh
RG_Energy_Fast.ccVariantType.hh
RG_Energy_RNA.ccrna / util.hh
RG_LocalEnergy.ccVariantType.hh
RingClosureEnergy.ccAA.hh
RingClosureEnergy.ccVariantType.hh
RNA_DataBackboneEnergy.ccChemicalManager.hh
RNA_DataBackboneEnergy.ccResidueType.fwd.hh
RNA_DataBackboneEnergy.ccResidueType.hh
RNA_DataBackboneEnergy.ccResidueTypeSet.hh
RNA_FullAtomStackingEnergy.ccAtomType.hh
RNA_FullAtomVDW_BasePhosphate.ccrna / RNA_Info.hh
RNA_FullAtomVDW_BasePhosphate.ccrna / util.hh
RNA_JR_SuiteEnergy.ccrna / util.hh
RNA_MgPointEnergy.ccAtomType.hh
RNA_PairwiseLowResolutionEnergy.ccrna / util.hh
RNA_StubCoordinateEnergy.ccAtomType.hh
RNA_SugarCloseEnergy.ccrna / RNA_FittedTorsionInfo.hh
RNA_SugarCloseEnergy.ccrna / RNA_Info.hh
RNA_SugarCloseEnergy.ccrna / util.hh
RNA_SugarCloseEnergy.hhrna / RNA_FittedTorsionInfo.fwd.hh
RNA_TorsionEnergy.hhrna / RNA_FittedTorsionInfo.hh
RNP_LowResEnergy.ccAtomType.hh
RNP_LowResPairDistEnergy.ccAtomType.hh
RNP_LowResStackEnergy.ccAtomType.hh
SAXSEnergy.ccAtomType.hh
SAXSEnergy.ccChemicalManager.hh
SAXSEnergy.hhResidueTypeSet.fwd.hh
SAXSEnergyCEN.hhChemicalManager.hh
SAXSEnergyFA.hhAtomTypeSet.fwd.hh
SAXSEnergyFA.hhChemicalManager.fwd.hh
SAXSEnergyFA.hhChemicalManager.hh
SAXSEnergyFA.hhElementSet.fwd.hh
SAXSEnergyFA.hhMMAtomTypeSet.fwd.hh
SAXSEnergyFA.hhorbitals / OrbitalTypeSet.fwd.hh
SAXSEnergyFA.hhResidueTypeSet.fwd.hh
SequenceDependentRefEnergy.ccAA.hh
SmoothCenPairEnergy.ccVariantType.hh
SmoothEnvEnergy.ccVariantType.hh
StackElecEnergy.ccAtomType.hh
SugarBackboneEnergy.cccarbohydrates / CarbohydrateInfo.hh
SugarBackboneEnergy.ccVariantType.hh
SurfEnergy.ccAtomType.hh
SurfVolEnergy.ccAtomType.hh
WaterAdductIntraEnergy.ccAtomType.hh
WaterSpecificEnergy.ccAtomType.hh
XtalMLEnergy.ccAA.hh
XtalMLEnergy.ccAtomType.hh
XtalMLEnergy.ccChemicalManager.hh
XtalMLEnergy.hhAA.hh
XtalMLEnergy.hhChemicalManager.hh
YHHPlanarityEnergy.ccVariantType.hh