Rosetta  2021.16
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energy_methods → scoring Relation

File in src/core/energy_methodsIncludes file in src/core/scoring
AACompositionEnergy.ccaa_composition_energy / AACompositionConstraint.hh
AACompositionEnergy.ccaa_composition_energy / AACompositionEnergySetup.hh
AACompositionEnergy.ccconstraints / ConstraintSet.hh
AACompositionEnergy.ccEnergyMap.hh
AACompositionEnergy.ccmethods / EnergyMethod.hh
AACompositionEnergy.ccmethods / EnergyMethodOptions.hh
AACompositionEnergy.ccScoringManager.hh
AACompositionEnergy.ccaa_composition_energy / SequenceConstraint.hh
AACompositionEnergy.hhaa_composition_energy / AACompositionEnergySetup.hh
AACompositionEnergy.hhEnergyMap.fwd.hh
AACompositionEnergy.hhmethods / EnergyMethod.hh
AACompositionEnergy.hhmethods / EnergyMethodOptions.fwd.hh
AACompositionEnergy.hhannealing / ResidueArrayAnnealableEnergy.hh
AACompositionEnergy.hhScoreFunction.fwd.hh
AACompositionEnergy.hhmethods / WholeStructureEnergy.hh
AACompositionEnergyCreator.hhmethods / EnergyMethod.fwd.hh
AACompositionEnergyCreator.hhmethods / EnergyMethodCreator.hh
AACompositionEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
AARepeatEnergy.ccEnergyMap.hh
AARepeatEnergy.ccmethods / EnergyMethod.hh
AARepeatEnergy.hhEnergyMap.fwd.hh
AARepeatEnergy.hhmethods / EnergyMethod.hh
AARepeatEnergy.hhannealing / ResidueArrayAnnealableEnergy.hh
AARepeatEnergy.hhScoreFunction.fwd.hh
AARepeatEnergy.hhmethods / WholeStructureEnergy.hh
AARepeatEnergyCreator.hhmethods / EnergyMethod.fwd.hh
AARepeatEnergyCreator.hhmethods / EnergyMethodCreator.hh
AARepeatEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
AbegoEnergy.ccEnergyMap.hh
AbegoEnergy.ccP_AA_ABEGO3.hh
AbegoEnergy.ccScoringManager.hh
AbegoEnergy.hhP_AA_ABEGO3.fwd.hh
AbegoEnergy.hhScoreFunction.fwd.hh
AbegoEnergy.hhmethods / WholeStructureEnergy.hh
AbegoEnergyCreator.hhmethods / EnergyMethodCreator.hh
ArgCationPiEnergy.ccconstraints / ConstraintSet.hh
ArgCationPiEnergy.ccDerivVectorPair.hh
ArgCationPiEnergy.ccEnergyMap.hh
ArgCationPiEnergy.ccScoreFunction.hh
ArgCationPiEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
ArgCationPiEnergy.hhmethods / EnergyMethodCreator.hh
ArgCationPiEnergy.hhmethods / EnergyMethodOptions.hh
ArgCationPiEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ArgCationPiEnergyCreator.hhmethods / EnergyMethodCreator.hh
ArgCationPiEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
AromaticBackboneRestraintEnergy.ccDerivVectorPair.hh
AromaticBackboneRestraintEnergy.ccEnergyMap.hh
AromaticBackboneRestraintEnergy.ccScoringManager.hh
AromaticBackboneRestraintEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
AromaticBackboneRestraintEnergy.hhMinimizationData.fwd.hh
AromaticBackboneRestraintEnergy.hhScoreFunction.fwd.hh
AromaticBackboneRestraintEnergyCreator.hhmethods / EnergyMethod.fwd.hh
AromaticBackboneRestraintEnergyCreator.hhmethods / EnergyMethodCreator.hh
AromaticBackboneRestraintEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
AspartimidePenaltyEnergy.ccDerivVectorPair.hh
AspartimidePenaltyEnergy.ccEnergies.hh
AspartimidePenaltyEnergy.ccEnergyMap.hh
AspartimidePenaltyEnergy.ccmethods / EnergyMethodOptions.hh
AspartimidePenaltyEnergy.ccPolymerBondedEnergyContainer.hh
AspartimidePenaltyEnergy.ccScoringManager.hh
AspartimidePenaltyEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
AspartimidePenaltyEnergy.hhmethods / EnergyMethodOptions.fwd.hh
AspartimidePenaltyEnergy.hhScoreFunction.fwd.hh
AspartimidePenaltyEnergy.hhmethods / util.hh
AspartimidePenaltyEnergyCreator.hhmethods / EnergyMethod.fwd.hh
AspartimidePenaltyEnergyCreator.hhmethods / EnergyMethodCreator.hh
AspartimidePenaltyEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
BranchEnergy.ccmethods / branch_energy_util.hh
BranchEnergy.ccEnergyMap.hh
BranchEnergy.hhEnergyMap.fwd.hh
BranchEnergy.hhScoreFunction.fwd.hh
BranchEnergy.hhmethods / WholeStructureEnergy.hh
BranchEnergyCreator.hhmethods / EnergyMethod.fwd.hh
BranchEnergyCreator.hhmethods / EnergyMethodCreator.hh
BranchEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
Burial_v2Energy.ccEnergies.hh
Burial_v2Energy.ccEnergyMap.hh
Burial_v2Energy.hhScoreFunction.fwd.hh
Burial_v2Energy.hhScoreType.hh
Burial_v2Energy.hhmethods / WholeStructureEnergy.hh
Burial_v2EnergyCreator.hhmethods / EnergyMethod.fwd.hh
Burial_v2EnergyCreator.hhmethods / EnergyMethodCreator.hh
Burial_v2EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
BurialEnergy.ccContextGraphTypes.hh
BurialEnergy.ccEnergies.hh
BurialEnergy.ccEnergyMap.hh
BurialEnergy.ccTwelveANeighborGraph.hh
BurialEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
BurialEnergy.hhScoreFunction.fwd.hh
BurialEnergy.hhScoreType.hh
BurialEnergyCreator.hhmethods / EnergyMethod.fwd.hh
BurialEnergyCreator.hhmethods / EnergyMethodCreator.hh
BurialEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CartesianBondedEnergy.ccmethods / CartBondedParameters.hh
CartesianBondedEnergy.ccDerivVectorPair.hh
CartesianBondedEnergy.ccEnergies.hh
CartesianBondedEnergy.ccEnergyMap.hh
CartesianBondedEnergy.ccmethods / EnergyMethodOptions.hh
CartesianBondedEnergy.ccmm / MMBondAngleLibrary.hh
CartesianBondedEnergy.ccmm / MMBondLengthLibrary.hh
CartesianBondedEnergy.ccPolymerBondedEnergyContainer.hh
CartesianBondedEnergy.ccScoringManager.hh
CartesianBondedEnergy.hhmethods / CartBondedParameters.hh
CartesianBondedEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
CartesianBondedEnergy.hhmethods / EnergyMethodOptions.fwd.hh
CartesianBondedEnergy.hhScoreFunction.fwd.hh
CartesianBondedEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CartesianBondedEnergyCreator.hhmethods / EnergyMethodCreator.hh
CartesianBondedEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CenHBEnergy.ccCenHBPotential.hh
CenHBEnergy.ccDerivVectorPair.hh
CenHBEnergy.ccEnergyMap.hh
CenHBEnergy.ccmethods / EnergyMethodOptions.hh
CenHBEnergy.ccScoringManager.hh
CenHBEnergy.hhCenHBPotential.fwd.hh
CenHBEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
CenHBEnergy.hhmethods / EnergyMethodOptions.fwd.hh
CenHBEnergy.hhScoreFunction.fwd.hh
CenHBEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CenHBEnergyCreator.hhmethods / EnergyMethodCreator.hh
CenHBEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CenPairEnergy.ccEnergyMap.hh
CenPairEnergy.ccEnvPairPotential.hh
CenPairEnergy.ccScoringManager.hh
CenPairEnergy.ccmethods / util.hh
CenPairEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
CenPairEnergy.hhEnvPairPotential.fwd.hh
CenPairEnergy.hhScoreFunction.fwd.hh
CenPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CenPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
CenPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CenPairMotifDegreeEnergy.ccdssp / Dssp.hh
CenPairMotifDegreeEnergy.ccEnergyMap.hh
CenPairMotifDegreeEnergy.ccmotif / motif_hash_stuff.hh
CenPairMotifDegreeEnergy.ccmotif / util.hh
CenPairMotifDegreeEnergy.hhmotif / motif_hash_stuff.hh
CenPairMotifDegreeEnergy.hhScoreFunction.fwd.hh
CenPairMotifDegreeEnergy.hhScoreType.hh
CenPairMotifDegreeEnergy.hhmethods / WholeStructureEnergy.hh
CenPairMotifDegreeEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CenPairMotifDegreeEnergyCreator.hhmethods / EnergyMethodCreator.hh
CenPairMotifDegreeEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CenPairMotifEnergy.ccdssp / Dssp.hh
CenPairMotifEnergy.ccEnergyMap.hh
CenPairMotifEnergy.ccmotif / motif_hash_stuff.hh
CenPairMotifEnergy.ccmotif / util.hh
CenPairMotifEnergy.hhmotif / motif_hash_stuff.hh
CenPairMotifEnergy.hhScoreFunction.fwd.hh
CenPairMotifEnergy.hhScoreType.hh
CenPairMotifEnergy.hhmethods / WholeStructureEnergy.hh
CenPairMotifEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CenPairMotifEnergyCreator.hhmethods / EnergyMethodCreator.hh
CenPairMotifEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CenRotEnvEnergy.ccCenRotEnvPairPotential.hh
CenRotEnvEnergy.ccDerivVectorPair.hh
CenRotEnvEnergy.ccEnergyMap.hh
CenRotEnvEnergy.ccScoringManager.hh
CenRotEnvEnergy.hhCenRotEnvPairPotential.fwd.hh
CenRotEnvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
CenRotEnvEnergy.hhScoreFunction.fwd.hh
CenRotEnvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CenRotEnvEnergyCreator.hhmethods / EnergyMethodCreator.hh
CenRotEnvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CenRotPairEnergy.ccCenRotEnvPairPotential.hh
CenRotPairEnergy.ccDerivVectorPair.hh
CenRotPairEnergy.ccEnergyMap.hh
CenRotPairEnergy.ccScoringManager.hh
CenRotPairEnergy.hhCenRotEnvPairPotential.fwd.hh
CenRotPairEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
CenRotPairEnergy.hhScoreFunction.fwd.hh
CenRotPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CenRotPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
CenRotPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
CentroidDisulfideEnergy.ccdisulfides / CentroidDisulfideEnergyContainer.hh
CentroidDisulfideEnergy.ccdisulfides / CentroidDisulfidePotential.hh
CentroidDisulfideEnergy.ccEnergies.hh
CentroidDisulfideEnergy.ccEnergyMap.hh
CentroidDisulfideEnergy.ccmethods / Methods.hh
CentroidDisulfideEnergy.ccScoringManager.hh
CentroidDisulfideEnergy.hhdisulfides / CentroidDisulfidePotential.fwd.hh
CentroidDisulfideEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
CentroidDisulfideEnergy.hhmethods / Methods.hh
CentroidDisulfideEnergy.hhScoreFunction.fwd.hh
CentroidDisulfideEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CentroidDisulfideEnergyCreator.hhmethods / EnergyMethodCreator.hh
CentroidDisulfideEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ChainbreakEnergy.ccmethods / chainbreak_util.hh
ChainbreakEnergy.ccEnergyMap.hh
ChainbreakEnergy.hhEnergyMap.fwd.hh
ChainbreakEnergy.hhScoreFunction.fwd.hh
ChainbreakEnergy.hhmethods / WholeStructureEnergy.hh
ChainbreakEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ChainbreakEnergyCreator.hhmethods / EnergyMethodCreator.hh
ChainbreakEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ChemicalShiftAnisotropyEnergy.ccChemicalShiftAnisotropy.fwd.hh
ChemicalShiftAnisotropyEnergy.ccChemicalShiftAnisotropy.hh
ChemicalShiftAnisotropyEnergy.ccEnergyMap.hh
ChemicalShiftAnisotropyEnergy.ccScoreType.hh
ChemicalShiftAnisotropyEnergy.hhChemicalShiftAnisotropy.fwd.hh
ChemicalShiftAnisotropyEnergy.hhScoreFunction.fwd.hh
ChemicalShiftAnisotropyEnergy.hhScoreType.hh
ChemicalShiftAnisotropyEnergy.hhmethods / WholeStructureEnergy.hh
ChemicalShiftAnisotropyEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ChemicalShiftAnisotropyEnergyCreator.hhmethods / EnergyMethodCreator.hh
ChemicalShiftAnisotropyEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ContactOrderEnergy.ccEnergyMap.hh
ContactOrderEnergy.hhScoreFunction.fwd.hh
ContactOrderEnergy.hhScoreType.hh
ContactOrderEnergy.hhmethods / WholeStructureEnergy.hh
ContactOrderEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ContactOrderEnergyCreator.hhmethods / EnergyMethodCreator.hh
ContactOrderEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ContextDependentGeometricSolEnergy.ccetable / count_pair / CountPairAll.hh
ContextDependentGeometricSolEnergy.ccetable / count_pair / CountPairFactory.hh
ContextDependentGeometricSolEnergy.ccetable / count_pair / CountPairFunction.hh
ContextDependentGeometricSolEnergy.ccetable / count_pair / CountPairNone.hh
ContextDependentGeometricSolEnergy.ccEnergies.hh
ContextDependentGeometricSolEnergy.ccEnergiesCacheableDataType.hh
ContextDependentGeometricSolEnergy.ccEnergyGraph.hh
ContextDependentGeometricSolEnergy.ccmethods / EnergyMethodOptions.hh
ContextDependentGeometricSolEnergy.ccgeometric_solvation / GeometricSolEnergyEvaluator.hh
ContextDependentGeometricSolEnergy.cchbonds / HBondOptions.hh
ContextDependentGeometricSolEnergy.cchbonds / hbonds.hh
ContextDependentGeometricSolEnergy.cchbonds / HBondSet.hh
ContextDependentGeometricSolEnergy.ccMinimizationData.hh
ContextDependentGeometricSolEnergy.ccNeighborList.tmpl.hh
ContextDependentGeometricSolEnergy.ccResidueNeighborList.hh
ContextDependentGeometricSolEnergy.ccTenANeighborGraph.hh
ContextDependentGeometricSolEnergy.ccetable / count_pair / types.hh
ContextDependentGeometricSolEnergy.cchbonds / types.hh
ContextDependentGeometricSolEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
ContextDependentGeometricSolEnergy.hhetable / count_pair / CountPairAll.hh
ContextDependentGeometricSolEnergy.hhetable / count_pair / CountPairFactory.hh
ContextDependentGeometricSolEnergy.hhetable / count_pair / CountPairFunction.hh
ContextDependentGeometricSolEnergy.hhetable / count_pair / CountPairNone.hh
ContextDependentGeometricSolEnergy.hhmethods / EnergyMethodOptions.fwd.hh
ContextDependentGeometricSolEnergy.hhgeometric_solvation / GeometricSolEnergyEvaluator.fwd.hh
ContextDependentGeometricSolEnergy.hhMinimizationData.hh
ContextDependentGeometricSolEnergy.hhNeighborList.tmpl.hh
ContextDependentGeometricSolEnergy.hhResidueNeighborList.hh
ContextDependentGeometricSolEnergy.hhetable / count_pair / types.hh
ContextDependentGeometricSolEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ContextDependentGeometricSolEnergyCreator.hhmethods / EnergyMethodCreator.hh
ContextDependentGeometricSolEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ContextIndependentGeometricSolEnergy.ccetable / count_pair / CountPairFunction.hh
ContextIndependentGeometricSolEnergy.ccEnergies.hh
ContextIndependentGeometricSolEnergy.ccEnergiesCacheableDataType.hh
ContextIndependentGeometricSolEnergy.ccEnergyGraph.hh
ContextIndependentGeometricSolEnergy.ccmethods / EnergyMethodOptions.hh
ContextIndependentGeometricSolEnergy.ccgeometric_solvation / GeometricSolEnergyEvaluator.hh
ContextIndependentGeometricSolEnergy.cchbonds / HBondOptions.hh
ContextIndependentGeometricSolEnergy.cchbonds / hbonds_geom.hh
ContextIndependentGeometricSolEnergy.ccMinimizationData.hh
ContextIndependentGeometricSolEnergy.ccNeighborList.tmpl.hh
ContextIndependentGeometricSolEnergy.ccResidueNeighborList.hh
ContextIndependentGeometricSolEnergy.ccScoreFunction.hh
ContextIndependentGeometricSolEnergy.cchbonds / types.hh
ContextIndependentGeometricSolEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
ContextIndependentGeometricSolEnergy.hhetable / count_pair / CountPairAll.hh
ContextIndependentGeometricSolEnergy.hhetable / count_pair / CountPairFactory.hh
ContextIndependentGeometricSolEnergy.hhetable / count_pair / CountPairFunction.hh
ContextIndependentGeometricSolEnergy.hhetable / count_pair / CountPairNone.hh
ContextIndependentGeometricSolEnergy.hhmethods / EnergyMethodOptions.fwd.hh
ContextIndependentGeometricSolEnergy.hhgeometric_solvation / GeometricSolEnergyEvaluator.fwd.hh
ContextIndependentGeometricSolEnergy.hhMinimizationData.hh
ContextIndependentGeometricSolEnergy.hhNeighborList.tmpl.hh
ContextIndependentGeometricSolEnergy.hhResidueNeighborList.hh
ContextIndependentGeometricSolEnergyCreator.hhmethods / EnergyMethodCreator.hh
CovalentLabelingEnergy.ccContextGraphTypes.hh
CovalentLabelingEnergy.ccEnergies.hh
CovalentLabelingEnergy.ccEnergyMap.hh
CovalentLabelingEnergy.ccmethods / EnergyMethodOptions.hh
CovalentLabelingEnergy.ccfunc / FadeFunc.hh
CovalentLabelingEnergy.ccTwelveANeighborGraph.hh
CovalentLabelingEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
CovalentLabelingEnergy.hhScoreFunction.fwd.hh
CovalentLabelingEnergy.hhScoreType.hh
CovalentLabelingEnergyCreator.hhmethods / EnergyMethodCreator.hh
CovalentLabelingFAEnergy.ccContextGraphTypes.hh
CovalentLabelingFAEnergy.ccEnergies.hh
CovalentLabelingFAEnergy.ccEnergyMap.hh
CovalentLabelingFAEnergy.ccmethods / EnergyMethodOptions.hh
CovalentLabelingFAEnergy.ccfunc / FadeFunc.hh
CovalentLabelingFAEnergy.ccTwelveANeighborGraph.hh
CovalentLabelingFAEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
CovalentLabelingFAEnergy.hhScoreFunction.fwd.hh
CovalentLabelingFAEnergy.hhScoreType.hh
CovalentLabelingFAEnergyCreator.hhmethods / EnergyMethodCreator.hh
CustomAtomPairEnergy.ccmethods / EnergyMethodOptions.hh
CustomAtomPairEnergy.ccScoreFunction.hh
CustomAtomPairEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
CustomAtomPairEnergy.hhEnergyMap.fwd.hh
CustomAtomPairEnergy.hhScoreFunction.fwd.hh
CustomAtomPairEnergy.hhfunc / SOGFunc_Impl.hh
CustomAtomPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
CustomAtomPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
CustomAtomPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
D2H_SA_Energy.ccEnergiesCacheableDataType.hh
D2H_SA_Energy.ccEnergyMap.hh
D2H_SA_Energy.ccEnvPairPotential.hh
D2H_SA_Energy.ccsasa.hh
D2H_SA_Energy.hhScoreFunction.fwd.hh
D2H_SA_Energy.hhScoreType.hh
D2H_SA_Energy.hhmethods / WholeStructureEnergy.hh
D2H_SA_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
D2H_SA_EnergyCreator.hhmethods / EnergyMethodCreator.hh
D2H_SA_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DEEREnergy.ccAtomVDW.hh
DEEREnergy.ccepr_deer / metrics / DEERData.hh
DEEREnergy.ccepr_deer / DEERDataCache.hh
DEEREnergy.ccDenseEnergyContainer.hh
DEEREnergy.ccEnergies.hh
DEEREnergy.ccEnergyMap.hh
DEEREnergy.ccmethods / EnergyMethod.hh
DEEREnergy.ccmethods / EnergyMethodCreator.hh
DEEREnergy.ccmethods / EnergyMethodOptions.hh
DEEREnergy.ccepr_deer / EPRSpinLabel.hh
DEEREnergy.ccLREnergyContainer.hh
DEEREnergy.ccmethods / Methods.hh
DEEREnergy.ccScoreFunction.hh
DEEREnergy.ccScoreType.hh
DEEREnergy.ccScoringManager.hh
DEEREnergy.ccepr_deer / util.hh
DEEREnergy.hhmethods / ContextDependentLRTwoBodyEnergy.hh
DEEREnergy.hhepr_deer / metrics / DEERData.hh
DEEREnergy.hhepr_deer / DEERDataCache.hh
DEEREnergy.hhDenseEnergyContainer.hh
DEEREnergy.hhEnergyMap.fwd.hh
DEEREnergy.hhmethods / EnergyMethod.hh
DEEREnergy.hhepr_deer / EPRSpinLabel.hh
DEEREnergy.hhLREnergyContainer.hh
DEEREnergy.hhScoreFunction.fwd.hh
DEEREnergyCreator.hhmethods / EnergyMethodCreator.hh
DFIRE_Energy.ccDenseEnergyContainer.hh
DFIRE_Energy.ccmethods / dfire / DFIRE_Potential.hh
DFIRE_Energy.ccEnergies.hh
DFIRE_Energy.ccEnergyMap.hh
DFIRE_Energy.ccLREnergyContainer.hh
DFIRE_Energy.ccmethods / Methods.hh
DFIRE_Energy.ccScoreType.hh
DFIRE_Energy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
DFIRE_Energy.hhmethods / EnergyMethod.fwd.hh
DFIRE_Energy.hhScoreFunction.fwd.hh
DFIRE_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
DFIRE_EnergyCreator.hhmethods / EnergyMethodCreator.hh
DFIRE_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DipolarCouplingEnergy.ccDipolarCoupling.fwd.hh
DipolarCouplingEnergy.ccDipolarCoupling.hh
DipolarCouplingEnergy.ccEnergyMap.hh
DipolarCouplingEnergy.ccScoreType.hh
DipolarCouplingEnergy.hhDipolarCoupling.fwd.hh
DipolarCouplingEnergy.hhScoreFunction.fwd.hh
DipolarCouplingEnergy.hhScoreType.hh
DipolarCouplingEnergy.hhmethods / WholeStructureEnergy.hh
DipolarCouplingEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DipolarCouplingEnergyCreator.hhmethods / EnergyMethodCreator.hh
DipolarCouplingEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DirectReadoutEnergy.ccdna / DirectReadoutPotential.hh
DirectReadoutEnergy.ccEnergyMap.hh
DirectReadoutEnergy.ccScoringManager.hh
DirectReadoutEnergy.hhdna / DirectReadoutPotential.fwd.hh
DirectReadoutEnergy.hhScoreFunction.fwd.hh
DirectReadoutEnergy.hhmethods / WholeStructureEnergy.hh
DirectReadoutEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DirectReadoutEnergyCreator.hhmethods / EnergyMethodCreator.hh
DirectReadoutEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DistanceChainbreakEnergy.ccEnergyMap.hh
DistanceChainbreakEnergy.hhEnergyMap.fwd.hh
DistanceChainbreakEnergy.hhScoreFunction.fwd.hh
DistanceChainbreakEnergy.hhmethods / WholeStructureEnergy.hh
DistanceChainbreakEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DistanceChainbreakEnergyCreator.hhmethods / EnergyMethodCreator.hh
DistanceChainbreakEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DisulfideMatchingEnergy.ccdisulfides / DisulfideMatchingEnergyContainer.hh
DisulfideMatchingEnergy.ccdisulfides / DisulfideMatchingPotential.hh
DisulfideMatchingEnergy.ccEnergies.hh
DisulfideMatchingEnergy.ccEnergyMap.hh
DisulfideMatchingEnergy.ccmethods / Methods.hh
DisulfideMatchingEnergy.ccScoringManager.hh
DisulfideMatchingEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
DisulfideMatchingEnergy.hhdisulfides / DisulfideMatchingPotential.fwd.hh
DisulfideMatchingEnergy.hhmethods / Methods.hh
DisulfideMatchingEnergy.hhScoreFunction.fwd.hh
DisulfideMatchingEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DisulfideMatchingEnergyCreator.hhmethods / EnergyMethodCreator.hh
DisulfideMatchingEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DNA_BaseEnergy.ccdna / BasePartner.hh
DNA_BaseEnergy.ccdna / DNA_BasePotential.hh
DNA_BaseEnergy.ccEnergyMap.hh
DNA_BaseEnergy.ccScoringManager.hh
DNA_BaseEnergy.ccdna / setup.hh
DNA_BaseEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
DNA_BaseEnergy.hhdna / DNA_BasePotential.fwd.hh
DNA_BaseEnergy.hhScoreFunction.fwd.hh
DNA_BaseEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DNA_BaseEnergyCreator.hhmethods / EnergyMethodCreator.hh
DNA_BaseEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DNA_DihedralEnergy.ccdna / base_geometry.hh
DNA_DihedralEnergy.ccDerivVectorPair.hh
DNA_DihedralEnergy.ccdna / DNA_DihedralPotential.hh
DNA_DihedralEnergy.ccEnergies.hh
DNA_DihedralEnergy.ccEnergyMap.hh
DNA_DihedralEnergy.ccPolymerBondedEnergyContainer.hh
DNA_DihedralEnergy.ccScoreType.hh
DNA_DihedralEnergy.ccScoringManager.hh
DNA_DihedralEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
DNA_DihedralEnergy.hhdna / DNA_DihedralPotential.fwd.hh
DNA_DihedralEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DNA_DihedralEnergyCreator.hhmethods / EnergyMethodCreator.hh
DNA_DihedralEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DNA_EnvPairEnergy.ccetable / count_pair / CountPairFactory.hh
DNA_EnvPairEnergy.ccetable / count_pair / CountPairFunction.hh
DNA_EnvPairEnergy.ccdna / DirectReadoutPotential.hh
DNA_EnvPairEnergy.ccEnergyGraph.hh
DNA_EnvPairEnergy.ccScoringManager.hh
DNA_EnvPairEnergy.ccetable / count_pair / types.hh
DNA_EnvPairEnergy.hhdna / DNA_EnvPairPotential.hh
DNA_EnvPairEnergy.hhmethods / WholeStructureEnergy.hh
DNA_EnvPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DNA_EnvPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
DNA_EnvPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DNA_ReferenceEnergy.ccdna / BasePartner.hh
DNA_ReferenceEnergy.ccEnergyMap.hh
DNA_ReferenceEnergy.ccmethods / EnergyMethodOptions.hh
DNA_ReferenceEnergy.ccScoringManager.hh
DNA_ReferenceEnergy.hhdna / BasePartner.hh
DNA_ReferenceEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
DNA_ReferenceEnergy.hhmethods / EnergyMethodOptions.fwd.hh
DNA_ReferenceEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DNA_ReferenceEnergyCreator.hhmethods / EnergyMethodCreator.hh
DNA_ReferenceEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
DNAChiEnergy.ccdna / DNABFormPotential.hh
DNAChiEnergy.ccEnergyMap.hh
DNAChiEnergy.ccScoreType.hh
DNAChiEnergy.ccScoringManager.hh
DNAChiEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
DNAChiEnergy.hhdna / DNABFormPotential.fwd.hh
DNAChiEnergyCreator.hhmethods / EnergyMethodCreator.hh
DNATorsionEnergy.ccconstraints / AtomPairConstraint.hh
DNATorsionEnergy.ccconstraints / ConstraintSet.hh
DNATorsionEnergy.ccEnergyMap.hh
DNATorsionEnergy.ccfunc / HarmonicFunc.fwd.hh
DNATorsionEnergy.ccfunc / HarmonicFunc.hh
DNATorsionEnergy.ccScoreType.hh
DNATorsionEnergy.ccScoringManager.hh
DNATorsionEnergy.hhconstraints / ConstraintSet.fwd.hh
DNATorsionEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
DNATorsionEnergy.hhdna / DNATorsionPotential.hh
DNATorsionEnergyCreator.hhmethods / EnergyMethodCreator.hh
DumpTrajectoryEnergy.ccEnergies.hh
DumpTrajectoryEnergy.ccmethods / EnergyMethod.hh
DumpTrajectoryEnergy.ccmethods / EnergyMethodOptions.hh
DumpTrajectoryEnergy.hhEnergyMap.fwd.hh
DumpTrajectoryEnergy.hhmethods / EnergyMethod.hh
DumpTrajectoryEnergy.hhmethods / EnergyMethodOptions.fwd.hh
DumpTrajectoryEnergy.hhannealing / ResidueArrayAnnealableEnergy.hh
DumpTrajectoryEnergy.hhScoreFunction.fwd.hh
DumpTrajectoryEnergy.hhmethods / WholeStructureEnergy.hh
DumpTrajectoryEnergyCreator.hhmethods / EnergyMethod.fwd.hh
DumpTrajectoryEnergyCreator.hhmethods / EnergyMethodCreator.hh
DumpTrajectoryEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ElecDensAllAtomCenEnergy.ccContextGraphTypes.hh
ElecDensAllAtomCenEnergy.ccelectron_density / ElectronDensity.hh
ElecDensAllAtomCenEnergy.ccEnergies.hh
ElecDensAllAtomCenEnergy.ccOneToAllEnergyContainer.hh
ElecDensAllAtomCenEnergy.hhmethods / ContextDependentLRTwoBodyEnergy.hh
ElecDensAllAtomCenEnergy.hhScoreFunction.fwd.hh
ElecDensAllAtomCenEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ElecDensAllAtomCenEnergyCreator.hhmethods / EnergyMethodCreator.hh
ElecDensAllAtomCenEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ElecDensAtomwiseEnergy.ccContextGraphTypes.hh
ElecDensAtomwiseEnergy.ccelectron_density_atomwise / ElectronDensityAtomwise.hh
ElecDensAtomwiseEnergy.ccEnergies.hh
ElecDensAtomwiseEnergy.ccEnergyGraph.hh
ElecDensAtomwiseEnergy.ccEnergyMap.hh
ElecDensAtomwiseEnergy.ccmethods / EnergyMethodOptions.hh
ElecDensAtomwiseEnergy.ccOneToAllEnergyContainer.hh
ElecDensAtomwiseEnergy.ccScoreFunction.hh
ElecDensAtomwiseEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
ElecDensAtomwiseEnergy.hhScoreFunction.fwd.hh
ElecDensAtomwiseEnergyCreator.hhmethods / EnergyMethodCreator.hh
ElecDensCenEnergy.ccContextGraphTypes.hh
ElecDensCenEnergy.ccelectron_density / ElectronDensity.hh
ElecDensCenEnergy.ccEnergies.hh
ElecDensCenEnergy.ccEnergyGraph.hh
ElecDensCenEnergy.ccOneToAllEnergyContainer.hh
ElecDensCenEnergy.hhmethods / ContextDependentLRTwoBodyEnergy.hh
ElecDensCenEnergy.hhScoreFunction.fwd.hh
ElecDensCenEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ElecDensCenEnergyCreator.hhmethods / EnergyMethodCreator.hh
ElecDensCenEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ElecDensEnergy.ccContextGraphTypes.hh
ElecDensEnergy.ccelectron_density / ElectronDensity.hh
ElecDensEnergy.ccEnergies.hh
ElecDensEnergy.ccOneToAllEnergyContainer.hh
ElecDensEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
ElecDensEnergy.hhScoreFunction.fwd.hh
ElecDensEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ElecDensEnergyCreator.hhmethods / EnergyMethodCreator.hh
ElecDensEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
EnvEnergy.ccEnergyMap.hh
EnvEnergy.ccEnvPairPotential.hh
EnvEnergy.ccScoringManager.hh
EnvEnergy.ccmethods / util.hh
EnvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
EnvEnergy.hhEnvPairPotential.fwd.hh
EnvEnergy.hhScoreFunction.fwd.hh
EnvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
EnvEnergyCreator.hhmethods / EnergyMethodCreator.hh
EnvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
EnvSmoothEnergy.ccContextGraphTypes.hh
EnvSmoothEnergy.ccEnergies.hh
EnvSmoothEnergy.ccmethods / EnergyMethodOptions.hh
EnvSmoothEnergy.ccTwelveANeighborGraph.hh
EnvSmoothEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
EnvSmoothEnergy.hhmethods / EnergyMethodOptions.hh
EnvSmoothEnergy.hhScoreFunction.fwd.hh
EnvSmoothEnergyCreator.hhmethods / EnergyMethod.fwd.hh
EnvSmoothEnergyCreator.hhmethods / EnergyMethodCreator.hh
EnvSmoothEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ExactOccludedHbondSolEnergy.cchbonds / constants.hh
ExactOccludedHbondSolEnergy.ccetable / count_pair / CountPairFactory.hh
ExactOccludedHbondSolEnergy.ccetable / count_pair / CountPairFunction.hh
ExactOccludedHbondSolEnergy.ccEnergies.hh
ExactOccludedHbondSolEnergy.ccEnergyGraph.hh
ExactOccludedHbondSolEnergy.ccEnergyMap.hh
ExactOccludedHbondSolEnergy.ccetable / Etable.hh
ExactOccludedHbondSolEnergy.ccetable / EtableEnergy.hh
ExactOccludedHbondSolEnergy.cchbonds / HBEvalTuple.hh
ExactOccludedHbondSolEnergy.cchbonds / HBondDatabase.hh
ExactOccludedHbondSolEnergy.cchbonds / HBondOptions.hh
ExactOccludedHbondSolEnergy.cchbonds / hbonds.hh
ExactOccludedHbondSolEnergy.cchbonds / hbonds_geom.hh
ExactOccludedHbondSolEnergy.cchbonds / HBondSet.hh
ExactOccludedHbondSolEnergy.ccScoreFunction.hh
ExactOccludedHbondSolEnergy.ccScoringManager.hh
ExactOccludedHbondSolEnergy.ccTenANeighborGraph.hh
ExactOccludedHbondSolEnergy.cchbonds / types.hh
ExactOccludedHbondSolEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
ExactOccludedHbondSolEnergy.hhmethods / EnergyMethodOptions.fwd.hh
ExactOccludedHbondSolEnergy.hhetable / Etable.fwd.hh
ExactOccludedHbondSolEnergy.hhetable / EtableEnergy.fwd.hh
ExactOccludedHbondSolEnergy.hhhbonds / HBEvalTuple.fwd.hh
ExactOccludedHbondSolEnergy.hhhbonds / HBondDatabase.fwd.hh
ExactOccludedHbondSolEnergy.hhhbonds / HBondOptions.fwd.hh
ExactOccludedHbondSolEnergy.hhhbonds / HBondSet.fwd.hh
ExactOccludedHbondSolEnergy.hhhbonds / types.hh
ExactOccludedHbondSolEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ExactOccludedHbondSolEnergyCreator.hhmethods / EnergyMethodCreator.hh
ExactOccludedHbondSolEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FA_ElecEnergyAroAll.ccetable / count_pair / CountPairFactory.hh
FA_ElecEnergyAroAll.ccetable / count_pair / CountPairFunction.hh
FA_ElecEnergyAroAll.ccEnergies.hh
FA_ElecEnergyAroAll.ccEnergyGraph.hh
FA_ElecEnergyAroAll.ccetable / count_pair / types.hh
FA_ElecEnergyAroAll.hhmethods / EnergyMethod.fwd.hh
FA_ElecEnergyAroAll.hhmethods / EnergyMethodOptions.fwd.hh
FA_ElecEnergyAroAll.hhelec / FA_ElecEnergy.hh
FA_ElecEnergyAroAll.hhScoreFunction.fwd.hh
FA_ElecEnergyAroAllCreator.hhmethods / EnergyMethod.fwd.hh
FA_ElecEnergyAroAllCreator.hhmethods / EnergyMethodCreator.hh
FA_ElecEnergyAroAllCreator.hhmethods / EnergyMethodOptions.fwd.hh
FA_ElecEnergyAroAro.ccetable / count_pair / CountPairFactory.hh
FA_ElecEnergyAroAro.ccetable / count_pair / CountPairFunction.hh
FA_ElecEnergyAroAro.ccEnergies.hh
FA_ElecEnergyAroAro.ccEnergyGraph.hh
FA_ElecEnergyAroAro.ccetable / count_pair / types.hh
FA_ElecEnergyAroAro.hhmethods / EnergyMethod.fwd.hh
FA_ElecEnergyAroAro.hhmethods / EnergyMethodOptions.fwd.hh
FA_ElecEnergyAroAro.hhelec / FA_ElecEnergy.hh
FA_ElecEnergyAroAro.hhScoreFunction.fwd.hh
FA_ElecEnergyAroAroCreator.hhmethods / EnergyMethod.fwd.hh
FA_ElecEnergyAroAroCreator.hhmethods / EnergyMethodCreator.hh
FA_ElecEnergyAroAroCreator.hhmethods / EnergyMethodOptions.fwd.hh
FA_GrpElecEnergy.ccetable / count_pair / CountPairAll.hh
FA_GrpElecEnergy.ccetable / count_pair / CountPairFactory.hh
FA_GrpElecEnergy.ccetable / count_pair / CountPairFunction.hh
FA_GrpElecEnergy.ccetable / count_pair / CountPairNone.hh
FA_GrpElecEnergy.ccDerivVectorPair.hh
FA_GrpElecEnergy.ccEnergies.hh
FA_GrpElecEnergy.ccEnergiesCacheableDataType.hh
FA_GrpElecEnergy.ccEnergyGraph.hh
FA_GrpElecEnergy.ccmethods / EnergyMethodOptions.hh
FA_GrpElecEnergy.ccelec / GroupElec.hh
FA_GrpElecEnergy.cchbonds / HBondSet.hh
FA_GrpElecEnergy.ccMinimizationData.hh
FA_GrpElecEnergy.ccNeighborList.tmpl.hh
FA_GrpElecEnergy.ccResidueNeighborList.hh
FA_GrpElecEnergy.ccScoreFunction.hh
FA_GrpElecEnergy.ccTenANeighborGraph.hh
FA_GrpElecEnergy.ccetable / count_pair / types.hh
FA_GrpElecEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
FA_GrpElecEnergy.hhetable / coulomb / Coulomb.hh
FA_GrpElecEnergy.hhetable / count_pair / CountPairFunction.fwd.hh
FA_GrpElecEnergy.hhelec / electrie / ElecAtom.hh
FA_GrpElecEnergy.hhmethods / EnergyMethodOptions.fwd.hh
FA_GrpElecEnergy.hhelec / GroupElec.hh
FA_GrpElecEnergy.hhhbonds / HBondSet.hh
FA_GrpElecEnergy.hhtrie / RotamerTrieBase.fwd.hh
FA_GrpElecEnergy.hhtrie / TrieCountPairBase.fwd.hh
FA_GrpElecEnergyCreator.hhmethods / EnergyMethod.fwd.hh
FA_GrpElecEnergyCreator.hhmethods / EnergyMethodCreator.hh
FA_GrpElecEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
Fa_MbenvEnergy.ccmethods / ContextDependentOneBodyEnergy.hh
Fa_MbenvEnergy.ccEnergyMap.hh
Fa_MbenvEnergy.ccmethods / EnergyMethodOptions.hh
Fa_MbenvEnergy.ccetable / Etable.hh
Fa_MbenvEnergy.ccmemb_etable / MembEtable.hh
Fa_MbenvEnergy.ccMembrane_FAPotential.hh
Fa_MbenvEnergy.ccMembranePotential.hh
Fa_MbenvEnergy.ccMembraneTopology.hh
Fa_MbenvEnergy.ccScoreFunction.hh
Fa_MbenvEnergy.ccScoringManager.hh
Fa_MbenvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
Fa_MbenvEnergy.hhmemb_etable / MembEtable.fwd.hh
Fa_MbenvEnergy.hhMembrane_FAPotential.fwd.hh
Fa_MbenvEnergy.hhMembranePotential.fwd.hh
Fa_MbenvEnergy.hhMembraneTopology.fwd.hh
Fa_MbenvEnergy.hhScoreFunction.fwd.hh
Fa_MbenvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
Fa_MbenvEnergyCreator.hhmethods / EnergyMethodCreator.hh
Fa_MbenvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
Fa_MbsolvEnergy.ccetable / count_pair / CountPairFactory.hh
Fa_MbsolvEnergy.ccetable / count_pair / CountPairFunction.hh
Fa_MbsolvEnergy.ccEnergies.hh
Fa_MbsolvEnergy.ccEnergyGraph.hh
Fa_MbsolvEnergy.ccmethods / EnergyMethodOptions.hh
Fa_MbsolvEnergy.ccetable / Etable.hh
Fa_MbsolvEnergy.ccmemb_etable / MembEtable.hh
Fa_MbsolvEnergy.ccMembrane_FAPotential.hh
Fa_MbsolvEnergy.ccMembraneTopology.hh
Fa_MbsolvEnergy.ccScoreFunction.hh
Fa_MbsolvEnergy.ccScoringManager.hh
Fa_MbsolvEnergy.ccetable / count_pair / types.hh
Fa_MbsolvEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
Fa_MbsolvEnergy.hhetable / Etable.fwd.hh
Fa_MbsolvEnergy.hhmemb_etable / MembEtable.fwd.hh
Fa_MbsolvEnergy.hhMembrane_FAPotential.fwd.hh
Fa_MbsolvEnergy.hhMembraneTopology.fwd.hh
Fa_MbsolvEnergy.hhScoreFunction.fwd.hh
Fa_MbsolvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
Fa_MbsolvEnergyCreator.hhmethods / EnergyMethodCreator.hh
Fa_MbsolvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FACTSEnergy.ccContextGraphTypes.hh
FACTSEnergy.ccDenseEnergyContainer.hh
FACTSEnergy.ccEnergies.hh
FACTSEnergy.ccEnergyGraph.hh
FACTSEnergy.ccmethods / EnergyMethodOptions.hh
FACTSEnergy.ccfacts / FACTSPotential.hh
FACTSEnergy.ccScoreFunction.hh
FACTSEnergy.ccScoringManager.hh
FACTSEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
FACTSEnergy.hhEnergyMap.fwd.hh
FACTSEnergy.hhmethods / EnergyMethodOptions.fwd.hh
FACTSEnergy.hhfacts / FACTSPotential.fwd.hh
FACTSEnergy.hhScoreFunction.fwd.hh
FACTSEnergyCreator.hhmethods / EnergyMethodCreator.hh
FaMPEnvEnergy.ccmethods / ContextDependentOneBodyEnergy.hh
FaMPEnvEnergy.ccEnergyMap.hh
FaMPEnvEnergy.ccmethods / EnergyMethodOptions.hh
FaMPEnvEnergy.ccetable / Etable.hh
FaMPEnvEnergy.ccmemb_etable / MembEtable.hh
FaMPEnvEnergy.ccScoreFunction.hh
FaMPEnvEnergy.ccScoringManager.hh
FaMPEnvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
FaMPEnvEnergy.hhmemb_etable / MembEtable.fwd.hh
FaMPEnvEnergy.hhScoreFunction.fwd.hh
FaMPEnvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
FaMPEnvEnergyCreator.hhmethods / EnergyMethodCreator.hh
FaMPEnvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FaMPEnvSmoothEnergy.ccContextGraphTypes.hh
FaMPEnvSmoothEnergy.ccEnergies.hh
FaMPEnvSmoothEnergy.ccmembrane / MembraneData.hh
FaMPEnvSmoothEnergy.ccTwelveANeighborGraph.hh
FaMPEnvSmoothEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
FaMPEnvSmoothEnergy.hhScoreFunction.fwd.hh
FaMPEnvSmoothEnergyCreator.hhmethods / EnergyMethod.fwd.hh
FaMPEnvSmoothEnergyCreator.hhmethods / EnergyMethodCreator.hh
FaMPEnvSmoothEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FaMPSolvEnergy.ccmethods / ContextDependentTwoBodyEnergy.hh
FaMPSolvEnergy.ccetable / count_pair / CountPairFactory.hh
FaMPSolvEnergy.ccetable / count_pair / CountPairFunction.hh
FaMPSolvEnergy.ccEnergies.hh
FaMPSolvEnergy.ccEnergyGraph.hh
FaMPSolvEnergy.ccmethods / EnergyMethodOptions.hh
FaMPSolvEnergy.ccetable / Etable.hh
FaMPSolvEnergy.ccmemb_etable / MembEtable.hh
FaMPSolvEnergy.ccScoreFunction.hh
FaMPSolvEnergy.ccScoringManager.hh
FaMPSolvEnergy.ccetable / count_pair / types.hh
FaMPSolvEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
FaMPSolvEnergy.hhetable / Etable.fwd.hh
FaMPSolvEnergy.hhmemb_etable / MembEtable.fwd.hh
FaMPSolvEnergy.hhScoreFunction.fwd.hh
FaMPSolvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
FaMPSolvEnergyCreator.hhmethods / EnergyMethodCreator.hh
FaMPSolvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FastDensEnergy.ccContextGraphTypes.hh
FastDensEnergy.ccDerivVectorPair.hh
FastDensEnergy.ccelectron_density / ElectronDensity.hh
FastDensEnergy.ccEnergies.hh
FastDensEnergy.ccOneToAllEnergyContainer.hh
FastDensEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
FastDensEnergy.hhmethods / EnergyMethodOptions.hh
FastDensEnergy.hhScoreFunction.fwd.hh
FastDensEnergyCreator.hhmethods / EnergyMethod.fwd.hh
FastDensEnergyCreator.hhmethods / EnergyMethodCreator.hh
FastDensEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FastSAXSEnergy.ccEnergyMap.hh
FastSAXSEnergy.ccmethods / EnergyMethod.hh
FastSAXSEnergy.ccScoreType.hh
FastSAXSEnergy.ccmethods / WholeStructureEnergy.hh
FastSAXSEnergy.hhScoreFunction.fwd.hh
FastSAXSEnergy.hhScoreType.hh
FastSAXSEnergy.hhmethods / WholeStructureEnergy.hh
FastSAXSEnergyCreator.hhmethods / EnergyMethodCreator.hh
FiberDiffractionEnergy.ccEnergies.hh
FiberDiffractionEnergy.ccmethods / EnergyMethod.hh
FiberDiffractionEnergy.ccfiber_diffraction / FiberDiffraction.hh
FiberDiffractionEnergy.ccfiber_diffraction / util.hh
FiberDiffractionEnergy.ccfiber_diffraction / xray_scattering.hh
FiberDiffractionEnergy.hhEnergyMap.hh
FiberDiffractionEnergy.hhmethods / EnergyMethodOptions.hh
FiberDiffractionEnergy.hhScoreFunction.fwd.hh
FiberDiffractionEnergy.hhScoreType.hh
FiberDiffractionEnergy.hhmethods / WholeStructureEnergy.hh
FiberDiffractionEnergyCreator.hhmethods / EnergyMethodCreator.hh
FiberDiffractionEnergyDens.ccelectron_density / ElectronDensity.hh
FiberDiffractionEnergyDens.ccEnergies.hh
FiberDiffractionEnergyDens.ccmethods / EnergyMethod.hh
FiberDiffractionEnergyDens.ccfiber_diffraction / FiberDiffraction.hh
FiberDiffractionEnergyDens.ccfiber_diffraction / hankel_kiss_fft.hh
FiberDiffractionEnergyDens.ccfiber_diffraction / util.hh
FiberDiffractionEnergyDens.ccfiber_diffraction / util_ndft.hh
FiberDiffractionEnergyDens.ccfiber_diffraction / xray_scattering.hh
FiberDiffractionEnergyDens.hhEnergyMap.hh
FiberDiffractionEnergyDens.hhmethods / EnergyMethodOptions.hh
FiberDiffractionEnergyDens.hhScoreFunction.fwd.hh
FiberDiffractionEnergyDens.hhScoreType.hh
FiberDiffractionEnergyDens.hhmethods / WholeStructureEnergy.hh
FiberDiffractionEnergyDensCreator.hhmethods / EnergyMethodCreator.hh
FiberDiffractionEnergyGpuCreator.hhmethods / EnergyMethodCreator.hh
FreeDOF_Energy.ccEnergies.hh
FreeDOF_Energy.ccEnergyGraph.hh
FreeDOF_Energy.ccEnergyMap.hh
FreeDOF_Energy.ccmethods / EnergyMethodOptions.hh
FreeDOF_Energy.ccmethods / FreeDOF_Options.hh
FreeDOF_Energy.cchbonds / HBondOptions.hh
FreeDOF_Energy.cchbonds / hbonds.hh
FreeDOF_Energy.cchbonds / HBondSet.hh
FreeDOF_Energy.ccScoreFunction.hh
FreeDOF_Energy.ccScoreType.hh
FreeDOF_Energy.hhmethods / ContextIndependentOneBodyEnergy.hh
FreeDOF_Energy.hhmethods / EnergyMethodOptions.hh
FreeDOF_Energy.hhmethods / FreeDOF_Options.fwd.hh
FreeDOF_Energy.hhScoreFunction.fwd.hh
FreeDOF_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
FreeDOF_EnergyCreator.hhmethods / EnergyMethodCreator.hh
FreeDOF_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
FullatomDisulfideEnergy.ccDerivVectorPair.hh
FullatomDisulfideEnergy.ccdisulfides / DisulfideAtomIndices.hh
FullatomDisulfideEnergy.ccEnergies.hh
FullatomDisulfideEnergy.ccEnergyMap.hh
FullatomDisulfideEnergy.ccdisulfides / FullatomDisulfideEnergyContainer.hh
FullatomDisulfideEnergy.ccdisulfides / FullatomDisulfidePotential.hh
FullatomDisulfideEnergy.ccmethods / Methods.hh
FullatomDisulfideEnergy.ccMinimizationData.hh
FullatomDisulfideEnergy.ccScoreFunction.hh
FullatomDisulfideEnergy.ccScoringManager.hh
FullatomDisulfideEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
FullatomDisulfideEnergy.hhdisulfides / FullatomDisulfidePotential.fwd.hh
FullatomDisulfideEnergy.hhmethods / Methods.hh
FullatomDisulfideEnergy.hhScoreFunction.fwd.hh
FullatomDisulfideEnergyCreator.hhmethods / EnergyMethod.fwd.hh
FullatomDisulfideEnergyCreator.hhmethods / EnergyMethodCreator.hh
FullatomDisulfideEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
GaussianOverlapEnergy.ccEnergyMap.hh
GaussianOverlapEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
GaussianOverlapEnergy.hhScoreFunction.fwd.hh
GaussianOverlapEnergyCreator.hhmethods / EnergyMethod.fwd.hh
GaussianOverlapEnergyCreator.hhmethods / EnergyMethodCreator.hh
GaussianOverlapEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
GenBornEnergy.ccContextGraphTypes.hh
GenBornEnergy.ccDenseEnergyContainer.hh
GenBornEnergy.ccEnergies.hh
GenBornEnergy.ccmethods / EnergyMethodOptions.hh
GenBornEnergy.ccGenBornPotential.hh
GenBornEnergy.ccScoreFunction.hh
GenBornEnergy.ccScoringManager.hh
GenBornEnergy.hhmethods / ContextDependentLRTwoBodyEnergy.hh
GenBornEnergy.hhEnergyMap.fwd.hh
GenBornEnergy.hhmethods / EnergyMethodOptions.fwd.hh
GenBornEnergy.hhGenBornPotential.fwd.hh
GenBornEnergyCreator.hhmethods / EnergyMethod.fwd.hh
GenBornEnergyCreator.hhmethods / EnergyMethodCreator.hh
GenBornEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
GenericBondedEnergy.ccmethods / ContextIndependentTwoBodyEnergy.hh
GenericBondedEnergy.ccEnergies.hh
GenericBondedEnergy.ccEnergyMap.hh
GenericBondedEnergy.ccGenericBondedPotential.hh
GenericBondedEnergy.ccPolymerBondedEnergyContainer.hh
GenericBondedEnergy.ccScoreFunction.hh
GenericBondedEnergy.ccScoringManager.hh
GenericBondedEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
GenericBondedEnergy.hhmethods / EnergyMethodOptions.hh
GenericBondedEnergy.hhGenericBondedPotential.hh
GenericBondedEnergy.hhMinimizationData.fwd.hh
GenericBondedEnergy.hhScoreFunction.fwd.hh
GenericBondedEnergyCreator.hhmethods / EnergyMethod.fwd.hh
GenericBondedEnergyCreator.hhmethods / EnergyMethodCreator.hh
GenericBondedEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
GoapEnergy.ccEnergies.hh
GoapEnergy.ccEnergyMap.hh
GoapEnergy.ccmethods / EnergyMethodOptions.hh
GoapEnergy.ccScoringManager.hh
GoapEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
GoapEnergy.hhEnergyMap.fwd.hh
GoapEnergy.hhmethods / EnergyMethodOptions.fwd.hh
GoapEnergy.hhScoreFunction.fwd.hh
GoapEnergyCreator.hhmethods / EnergyMethodCreator.hh
HackAroEnergy.ccEnergies.hh
HackAroEnergy.ccEnergyGraph.hh
HackAroEnergy.ccfunc / FadeFunc.hh
HackAroEnergy.ccfunc / Func.fwd.hh
HackAroEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
HackAroEnergy.hhScoreFunction.fwd.hh
HackAroEnergyCreator.hhmethods / EnergyMethod.fwd.hh
HackAroEnergyCreator.hhmethods / EnergyMethodCreator.hh
HackAroEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
HolesEnergy.ccpacking / compute_holes_score.hh
HolesEnergy.ccEnergyMap.hh
HolesEnergy.ccpacking / PoseBalls.hh
HolesEnergy.hhpacking / HolesParams.hh
HolesEnergy.hhScoreFunction.fwd.hh
HolesEnergy.hhScoreType.hh
HolesEnergy.hhmethods / WholeStructureEnergy.hh
HolesEnergyCreator.hhmethods / EnergyMethod.fwd.hh
HolesEnergyCreator.hhmethods / EnergyMethodCreator.hh
HolesEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
HRF_MSLabelingEnergy.ccContextGraphTypes.hh
HRF_MSLabelingEnergy.ccEnergies.hh
HRF_MSLabelingEnergy.ccEnergyMap.hh
HRF_MSLabelingEnergy.ccfunc / FadeFunc.hh
HRF_MSLabelingEnergy.ccTwelveANeighborGraph.hh
HRF_MSLabelingEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
HRF_MSLabelingEnergy.hhScoreFunction.fwd.hh
HRF_MSLabelingEnergy.hhScoreType.hh
HRF_MSLabelingEnergyCreator.hhmethods / EnergyMethodCreator.hh
HRFDynamicsEnergy.ccContextGraphTypes.hh
HRFDynamicsEnergy.ccEnergies.hh
HRFDynamicsEnergy.ccEnergyMap.hh
HRFDynamicsEnergy.ccmethods / EnergyMethodOptions.hh
HRFDynamicsEnergy.ccfunc / FadeFunc.hh
HRFDynamicsEnergy.ccTwelveANeighborGraph.hh
HRFDynamicsEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
HRFDynamicsEnergy.hhScoreFunction.fwd.hh
HRFDynamicsEnergy.hhScoreType.hh
HRFDynamicsEnergyCreator.hhmethods / EnergyMethodCreator.hh
HybridVDW_Energy.ccAtomVDW.hh
HybridVDW_Energy.ccetable / count_pair / CountPairFunction.fwd.hh
HybridVDW_Energy.ccEnergies.hh
HybridVDW_Energy.ccEnergyGraph.hh
HybridVDW_Energy.ccScoringManager.hh
HybridVDW_Energy.hhAtomVDW.fwd.hh
HybridVDW_Energy.hhmethods / ContextIndependentTwoBodyEnergy.hh
HybridVDW_Energy.hhScoreFunction.fwd.hh
HybridVDW_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
HybridVDW_EnergyCreator.hhmethods / EnergyMethodCreator.hh
HybridVDW_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
HydroxylTorsionEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
HydroxylTorsionEnergy.ccEnergyMap.hh
HydroxylTorsionEnergy.ccHydroxylTorsionPotential.hh
HydroxylTorsionEnergy.ccScoringManager.hh
HydroxylTorsionEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
HydroxylTorsionEnergy.hhHydroxylTorsionPotential.fwd.hh
HydroxylTorsionEnergy.hhMinimizationData.fwd.hh
HydroxylTorsionEnergy.hhScoreFunction.fwd.hh
HydroxylTorsionEnergyCreator.hhmethods / EnergyMethod.fwd.hh
HydroxylTorsionEnergyCreator.hhmethods / EnergyMethodCreator.hh
HydroxylTorsionEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
IntermolEnergy.ccEnergyMap.hh
IntermolEnergy.hhScoreFunction.fwd.hh
IntermolEnergy.hhScoreType.hh
IntermolEnergy.hhmethods / WholeStructureEnergy.hh
IntermolEnergyCreator.hhmethods / EnergyMethod.fwd.hh
IntermolEnergyCreator.hhmethods / EnergyMethodCreator.hh
IntermolEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
LinearBranchEnergy.ccmethods / branch_energy_util.hh
LinearBranchEnergy.ccEnergyMap.hh
LinearBranchEnergy.hhEnergyMap.fwd.hh
LinearBranchEnergy.hhScoreFunction.fwd.hh
LinearBranchEnergy.hhmethods / WholeStructureEnergy.hh
LinearBranchEnergyCreator.ccmethods / EnergyMethod.hh
LinearBranchEnergyCreator.ccmethods / EnergyMethodOptions.hh
LinearBranchEnergyCreator.ccScoreType.hh
LinearBranchEnergyCreator.hhmethods / EnergyMethod.fwd.hh
LinearBranchEnergyCreator.hhmethods / EnergyMethodCreator.hh
LinearBranchEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
LinearChainbreakEnergy.ccmethods / chainbreak_util.hh
LinearChainbreakEnergy.ccEnergyMap.hh
LinearChainbreakEnergy.hhEnergyMap.fwd.hh
LinearChainbreakEnergy.hhScoreFunction.fwd.hh
LinearChainbreakEnergy.hhmethods / WholeStructureEnergy.hh
LinearChainbreakEnergyCreator.ccmethods / EnergyMethod.hh
LinearChainbreakEnergyCreator.ccmethods / EnergyMethodOptions.hh
LinearChainbreakEnergyCreator.ccScoreType.hh
LinearChainbreakEnergyCreator.hhmethods / EnergyMethod.fwd.hh
LinearChainbreakEnergyCreator.hhmethods / EnergyMethodCreator.hh
LinearChainbreakEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
LK_hack.ccconstraints / AngleConstraint.hh
LK_hack.ccetable / count_pair / CountPairFactory.hh
LK_hack.ccetable / count_pair / CountPairFunction.hh
LK_hack.ccEnergies.hh
LK_hack.ccEnergyGraph.hh
LK_hack.ccmethods / EnergyMethodOptions.hh
LK_hack.ccetable / Etable.hh
LK_hack.ccfunc / Func.hh
LK_hack.ccScoreFunction.hh
LK_hack.ccScoringManager.hh
LK_hack.ccetable / count_pair / types.hh
LK_hack.hhmethods / ContextIndependentTwoBodyEnergy.hh
LK_hack.hhetable / Etable.fwd.hh
LK_hack.hhScoreFunction.fwd.hh
LK_hackCreator.hhmethods / EnergyMethod.fwd.hh
LK_hackCreator.hhmethods / EnergyMethodCreator.hh
LK_hackCreator.hhmethods / EnergyMethodOptions.fwd.hh
LK_PolarNonPolarEnergy.ccetable / count_pair / CountPairAll.hh
LK_PolarNonPolarEnergy.ccetable / count_pair / CountPairFactory.hh
LK_PolarNonPolarEnergy.ccetable / count_pair / CountPairFunction.hh
LK_PolarNonPolarEnergy.ccetable / count_pair / CountPairNone.hh
LK_PolarNonPolarEnergy.ccEnergies.hh
LK_PolarNonPolarEnergy.ccEnergiesCacheableDataType.hh
LK_PolarNonPolarEnergy.ccEnergyGraph.hh
LK_PolarNonPolarEnergy.ccmethods / EnergyMethodOptions.hh
LK_PolarNonPolarEnergy.ccetable / Etable.hh
LK_PolarNonPolarEnergy.ccetable / EtableEnergy.hh
LK_PolarNonPolarEnergy.ccgeometric_solvation / GeometricSolEnergyEvaluator.hh
LK_PolarNonPolarEnergy.ccMinimizationData.hh
LK_PolarNonPolarEnergy.ccNeighborList.tmpl.hh
LK_PolarNonPolarEnergy.ccResidueNeighborList.hh
LK_PolarNonPolarEnergy.ccScoreFunction.hh
LK_PolarNonPolarEnergy.ccScoringManager.hh
LK_PolarNonPolarEnergy.ccetable / count_pair / types.hh
LK_PolarNonPolarEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
LK_PolarNonPolarEnergy.hhetable / count_pair / CountPairAll.hh
LK_PolarNonPolarEnergy.hhetable / count_pair / CountPairFactory.hh
LK_PolarNonPolarEnergy.hhetable / count_pair / CountPairFunction.hh
LK_PolarNonPolarEnergy.hhetable / count_pair / CountPairNone.hh
LK_PolarNonPolarEnergy.hhetable / Etable.fwd.hh
LK_PolarNonPolarEnergy.hhetable / EtableEnergy.fwd.hh
LK_PolarNonPolarEnergy.hhScoreFunction.fwd.hh
LK_PolarNonPolarEnergy.hhetable / count_pair / types.hh
LK_PolarNonPolarEnergyCreator.hhmethods / EnergyMethod.fwd.hh
LK_PolarNonPolarEnergyCreator.hhmethods / EnergyMethodCreator.hh
LK_PolarNonPolarEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
LoopCloseEnergy.ccEnergyMap.hh
LoopCloseEnergy.ccmethods / EnergyMethodOptions.hh
LoopCloseEnergy.ccfunc / Func.hh
LoopCloseEnergy.ccloop_graph / evaluator / LoopClosePotentialEvaluator.hh
LoopCloseEnergy.ccloop_graph / LoopGraph.hh
LoopCloseEnergy.hhmethods / EnergyMethodOptions.fwd.hh
LoopCloseEnergy.hhloop_graph / LoopGraph.fwd.hh
LoopCloseEnergy.hhScoreFunction.fwd.hh
LoopCloseEnergy.hhScoreType.hh
LoopCloseEnergy.hhmethods / WholeStructureEnergy.hh
LoopCloseEnergyCreator.hhmethods / EnergyMethod.fwd.hh
LoopCloseEnergyCreator.hhmethods / EnergyMethodCreator.hh
LoopCloseEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MembraneCbetaEnergy.ccEnergyMap.hh
MembraneCbetaEnergy.ccMembranePotential.hh
MembraneCbetaEnergy.ccMembraneTopology.hh
MembraneCbetaEnergy.ccScoringManager.hh
MembraneCbetaEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MembraneCbetaEnergy.hhMembranePotential.fwd.hh
MembraneCbetaEnergy.hhMembraneTopology.fwd.hh
MembraneCbetaEnergy.hhScoreFunction.fwd.hh
MembraneCbetaEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MembraneCbetaEnergyCreator.hhmethods / EnergyMethodCreator.hh
MembraneCbetaEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MembraneCenPairEnergy.ccEnergyMap.hh
MembraneCenPairEnergy.ccMembranePotential.hh
MembraneCenPairEnergy.ccMembraneTopology.hh
MembraneCenPairEnergy.ccScoringManager.hh
MembraneCenPairEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
MembraneCenPairEnergy.hhMembranePotential.fwd.hh
MembraneCenPairEnergy.hhMembraneTopology.fwd.hh
MembraneCenPairEnergy.hhScoreFunction.fwd.hh
MembraneCenPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MembraneCenPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
MembraneCenPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MembraneEnvEnergy.ccEnergyMap.hh
MembraneEnvEnergy.ccMembranePotential.hh
MembraneEnvEnergy.ccMembraneTopology.hh
MembraneEnvEnergy.ccScoringManager.hh
MembraneEnvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MembraneEnvEnergy.hhmethods / EnergyMethod.fwd.hh
MembraneEnvEnergy.hhMembranePotential.fwd.hh
MembraneEnvEnergy.hhMembraneTopology.fwd.hh
MembraneEnvEnergy.hhScoreFunction.fwd.hh
MembraneEnvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MembraneEnvEnergyCreator.hhmethods / EnergyMethodCreator.hh
MembraneEnvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MembraneEnvPenalties.ccEnergyMap.hh
MembraneEnvPenalties.ccMembranePotential.hh
MembraneEnvPenalties.ccScoringManager.hh
MembraneEnvPenalties.hhMembranePotential.fwd.hh
MembraneEnvPenalties.hhScoreFunction.fwd.hh
MembraneEnvPenalties.hhScoreType.hh
MembraneEnvPenalties.hhmethods / WholeStructureEnergy.hh
MembraneEnvPenaltiesCreator.hhmethods / EnergyMethod.fwd.hh
MembraneEnvPenaltiesCreator.hhmethods / EnergyMethodCreator.hh
MembraneEnvPenaltiesCreator.hhmethods / EnergyMethodOptions.fwd.hh
MembraneEnvSmoothEnergy.ccContextGraphTypes.hh
MembraneEnvSmoothEnergy.ccEnergies.hh
MembraneEnvSmoothEnergy.ccMembranePotential.hh
MembraneEnvSmoothEnergy.ccTwelveANeighborGraph.hh
MembraneEnvSmoothEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MembraneEnvSmoothEnergy.hhScoreFunction.fwd.hh
MembraneEnvSmoothEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MembraneEnvSmoothEnergyCreator.hhmethods / EnergyMethodCreator.hh
MembraneEnvSmoothEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MembraneLipo.ccEnergyMap.hh
MembraneLipo.ccMembranePotential.hh
MembraneLipo.ccMembraneTopology.hh
MembraneLipo.ccScoringManager.hh
MembraneLipo.hhMembranePotential.fwd.hh
MembraneLipo.hhScoreFunction.fwd.hh
MembraneLipo.hhScoreType.hh
MembraneLipo.hhmethods / WholeStructureEnergy.hh
MembraneLipoCreator.hhmethods / EnergyMethod.fwd.hh
MembraneLipoCreator.hhmethods / EnergyMethodCreator.hh
MembraneLipoCreator.hhmethods / EnergyMethodOptions.fwd.hh
MgEnergy.ccetable / count_pair / CountPairAll.hh
MgEnergy.ccDerivVectorPair.hh
MgEnergy.ccEnergies.hh
MgEnergy.ccEnergyGraph.hh
MgEnergy.ccfunc / FadeFunc.hh
MgEnergy.cchbonds / HBondOptions.hh
MgEnergy.cchbonds / hbonds_geom.hh
MgEnergy.ccmagnesium / MgKnowledgeBasedPotential.hh
MgEnergy.ccMinimizationData.hh
MgEnergy.ccResidueNeighborList.hh
MgEnergy.ccrna / RNA_ScoringInfo.hh
MgEnergy.ccScoringManager.hh
MgEnergy.ccmagnesium / util.hh
MgEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
MgEnergy.hhfunc / Func.fwd.hh
MgEnergy.hhmagnesium / MgKnowledgeBasedPotential.fwd.hh
MgEnergy.hhrna / RNA_ScoringInfo.hh
MgEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MgEnergyCreator.hhmethods / EnergyMethodCreator.hh
MgEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MHCEpitopeEnergy.ccconstraints / ConstraintSet.hh
MHCEpitopeEnergy.ccEnergyMap.hh
MHCEpitopeEnergy.ccmethods / EnergyMethod.hh
MHCEpitopeEnergy.ccmethods / EnergyMethodOptions.hh
MHCEpitopeEnergy.ccmhc_epitope_energy / MHCEpitopeConstraint.hh
MHCEpitopeEnergy.ccmhc_epitope_energy / MHCEpitopeEnergySetup.hh
MHCEpitopeEnergy.ccmhc_epitope_energy / MHCEpitopePredictor.hh
MHCEpitopeEnergy.ccmhc_epitope_energy / MHCEpitopePredictorMatrix.hh
MHCEpitopeEnergy.ccScoringManager.hh
MHCEpitopeEnergy.ccaa_composition_energy / SequenceConstraint.hh
MHCEpitopeEnergy.hhEnergyMap.fwd.hh
MHCEpitopeEnergy.hhmethods / EnergyMethod.hh
MHCEpitopeEnergy.hhmethods / EnergyMethodOptions.fwd.hh
MHCEpitopeEnergy.hhmhc_epitope_energy / MHCEpitopeEnergySetup.hh
MHCEpitopeEnergy.hhannealing / ResidueArrayAnnealableEnergy.hh
MHCEpitopeEnergy.hhScoreFunction.fwd.hh
MHCEpitopeEnergy.hhmethods / WholeStructureEnergy.hh
MHCEpitopeEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MHCEpitopeEnergyCreator.hhmethods / EnergyMethodCreator.hh
MHCEpitopeEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MissingEnergy.ccEnergyMap.hh
MissingEnergy.hhScoreFunction.fwd.hh
MissingEnergy.hhScoreType.hh
MissingEnergy.hhmethods / WholeStructureEnergy.hh
MissingEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MissingEnergyCreator.hhmethods / EnergyMethodCreator.hh
MissingEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MotifDockEnergy.ccDerivVectorPair.hh
MotifDockEnergy.ccEnergyMap.hh
MotifDockEnergy.ccmotif / motif_hash_stuff.hh
MotifDockEnergy.ccScoringManager.hh
MotifDockEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
MotifDockEnergy.hhScoreFunction.fwd.hh
MotifDockEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MotifDockEnergyCreator.hhmethods / EnergyMethodCreator.hh
MotifDockEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPCBetaEnergy.ccEnergyMap.hh
MPCBetaEnergy.ccmembrane / MembraneData.hh
MPCBetaEnergy.ccScoringManager.hh
MPCBetaEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MPCBetaEnergy.hhEnvPairPotential.hh
MPCBetaEnergy.hhmembrane / MembraneData.hh
MPCBetaEnergy.hhScoreFunction.fwd.hh
MPCBetaEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPCBetaEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPCBetaEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPEnvEnergy.ccEnergyMap.hh
MPEnvEnergy.ccmembrane / MembraneData.hh
MPEnvEnergy.ccScoringManager.hh
MPEnvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MPEnvEnergy.hhmethods / EnergyMethod.fwd.hh
MPEnvEnergy.hhEnvPairPotential.fwd.hh
MPEnvEnergy.hhmembrane / MembraneData.fwd.hh
MPEnvEnergy.hhScoreFunction.fwd.hh
MPEnvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPEnvEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPEnvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPHelicalityEnergy.ccContextGraphTypes.hh
MPHelicalityEnergy.ccEnergies.hh
MPHelicalityEnergy.ccmembrane / MembraneData.hh
MPHelicalityEnergy.ccTenANeighborGraph.hh
MPHelicalityEnergy.ccTwelveANeighborGraph.hh
MPHelicalityEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MPHelicalityEnergy.hhScoreFunction.fwd.hh
MPHelicalityEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPHelicalityEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPHelicalityEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPPairEnergy.ccEnergyMap.hh
MPPairEnergy.ccmembrane / MembraneData.hh
MPPairEnergy.ccScoringManager.hh
MPPairEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
MPPairEnergy.hhmembrane / MembraneData.fwd.hh
MPPairEnergy.hhScoreFunction.fwd.hh
MPPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPResidueLipophilicityEnergy.ccContextGraphTypes.hh
MPResidueLipophilicityEnergy.ccEnergies.hh
MPResidueLipophilicityEnergy.ccmembrane / MembraneData.hh
MPResidueLipophilicityEnergy.ccTwelveANeighborGraph.hh
MPResidueLipophilicityEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
MPResidueLipophilicityEnergy.hhScoreFunction.fwd.hh
MPResidueLipophilicityEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPResidueLipophilicityEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPResidueLipophilicityEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPSpanAngleEnergy.ccdssp / Dssp.hh
MPSpanAngleEnergy.ccEnergyMap.hh
MPSpanAngleEnergy.hhScoreFunction.fwd.hh
MPSpanAngleEnergy.hhScoreType.hh
MPSpanAngleEnergy.hhmethods / WholeStructureEnergy.hh
MPSpanAngleEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPSpanAngleEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPSpanAngleEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MPSpanInsertionEnergy.ccdssp / Dssp.hh
MPSpanInsertionEnergy.ccEnergyMap.hh
MPSpanInsertionEnergy.hhScoreFunction.fwd.hh
MPSpanInsertionEnergy.hhScoreType.hh
MPSpanInsertionEnergy.hhmethods / WholeStructureEnergy.hh
MPSpanInsertionEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MPSpanInsertionEnergyCreator.hhmethods / EnergyMethodCreator.hh
MPSpanInsertionEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
MultipoleElecEnergy.ccDenseEnergyContainer.hh
MultipoleElecEnergy.ccEnergies.hh
MultipoleElecEnergy.ccmethods / EnergyMethodOptions.hh
MultipoleElecEnergy.ccMinimizationData.hh
MultipoleElecEnergy.ccMultipoleElecPotential.hh
MultipoleElecEnergy.ccScoreFunction.hh
MultipoleElecEnergy.ccScoringManager.hh
MultipoleElecEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
MultipoleElecEnergy.hhEnergyMap.fwd.hh
MultipoleElecEnergy.hhmethods / EnergyMethodOptions.fwd.hh
MultipoleElecEnergy.hhMultipoleElecPotential.fwd.hh
MultipoleElecEnergyCreator.hhmethods / EnergyMethod.fwd.hh
MultipoleElecEnergyCreator.hhmethods / EnergyMethodCreator.hh
MultipoleElecEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
NetChargeEnergy.ccconstraints / ConstraintSet.hh
NetChargeEnergy.ccEnergyMap.hh
NetChargeEnergy.ccmethods / EnergyMethod.hh
NetChargeEnergy.ccmethods / EnergyMethodOptions.hh
NetChargeEnergy.ccnetcharge_energy / NetChargeConstraint.hh
NetChargeEnergy.ccnetcharge_energy / NetChargeEnergySetup.hh
NetChargeEnergy.ccScoringManager.hh
NetChargeEnergy.ccaa_composition_energy / SequenceConstraint.hh
NetChargeEnergy.hhEnergyMap.fwd.hh
NetChargeEnergy.hhmethods / EnergyMethod.hh
NetChargeEnergy.hhmethods / EnergyMethodOptions.fwd.hh
NetChargeEnergy.hhnetcharge_energy / NetChargeEnergySetup.fwd.hh
NetChargeEnergy.hhnetcharge_energy / NetChargeEnergySetup.hh
NetChargeEnergy.hhannealing / ResidueArrayAnnealableEnergy.hh
NetChargeEnergy.hhScoreFunction.fwd.hh
NetChargeEnergy.hhmethods / WholeStructureEnergy.hh
NetChargeEnergyCreator.hhmethods / EnergyMethod.fwd.hh
NetChargeEnergyCreator.hhmethods / EnergyMethodCreator.hh
NetChargeEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
non_scorefxn_exact_model.ccEnergies.hh
non_scorefxn_exact_model.ccetable / Etable.hh
non_scorefxn_exact_model.ccetable / EtableOptions.hh
non_scorefxn_exact_model.cchbonds / HBEvalTuple.hh
non_scorefxn_exact_model.cchbonds / hbonds_geom.hh
non_scorefxn_exact_model.ccTenANeighborGraph.hh
non_scorefxn_exact_model.cchbonds / types.hh
non_scorefxn_exact_model.hhetable / Etable.fwd.hh
non_scorefxn_exact_model.hhhbonds / types.hh
NPDHBondEnergy.ccdssp / Dssp.hh
NPDHBondEnergy.ccEnergies.hh
NPDHBondEnergy.ccEnergiesCacheableDataType.hh
NPDHBondEnergy.ccmethods / EnergyMethodOptions.hh
NPDHBondEnergy.cchbonds / hbtrie / HBAtom.hh
NPDHBondEnergy.cchbonds / hbtrie / HBCountPairFunction.hh
NPDHBondEnergy.cchbonds / hbtrie / HBCPData.hh
NPDHBondEnergy.cchbonds / HBEvalTuple.hh
NPDHBondEnergy.cchbonds / HBondDatabase.hh
NPDHBondEnergy.cchbonds / HBondOptions.hh
NPDHBondEnergy.cchbonds / hbonds.hh
NPDHBondEnergy.cchbonds / hbonds_geom.hh
NPDHBondEnergy.cchbonds / hbtrie / HBondTrie.fwd.hh
NPDHBondEnergy.cclkball / LK_BallEnergy.hh
NPDHBondEnergy.ccMembrane_FAPotential.hh
NPDHBondEnergy.ccMembranePotential.hh
NPDHBondEnergy.ccMinimizationData.hh
NPDHBondEnergy.cchbonds / NPDHBondSet.hh
NPDHBondEnergy.cctrie / RotamerDescriptor.hh
NPDHBondEnergy.cctrie / RotamerTrie.hh
NPDHBondEnergy.cctrie / RotamerTrieBase.hh
NPDHBondEnergy.ccScoreFunction.hh
NPDHBondEnergy.ccScoringManager.hh
NPDHBondEnergy.ccTenANeighborGraph.hh
NPDHBondEnergy.cctrie / TrieCollection.hh
NPDHBondEnergy.hhhbonds / constants.hh
NPDHBondEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
NPDHBondEnergy.hhEnergyMap.hh
NPDHBondEnergy.hhhbonds / hbtrie / HBAtom.hh
NPDHBondEnergy.hhhbonds / HBondDatabase.fwd.hh
NPDHBondEnergy.hhhbonds / HBondOptions.fwd.hh
NPDHBondEnergy.hhhbonds / HBondSet.fwd.hh
NPDHBondEnergy.hhhbonds / hbtrie / HBondTrie.fwd.hh
NPDHBondEnergy.hhScoreFunction.fwd.hh
NPDHBondEnergyCreator.hhmethods / EnergyMethod.fwd.hh
NPDHBondEnergyCreator.hhmethods / EnergyMethodCreator.hh
NPDHBondEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
OccludedHbondSolEnergy.ccgeometric_solvation / DatabaseOccSolEne.hh
OccludedHbondSolEnergy.ccDerivVectorPair.hh
OccludedHbondSolEnergy.ccEnergyMap.hh
OccludedHbondSolEnergy.ccmethods / EnergyMethodOptions.hh
OccludedHbondSolEnergy.ccScoringManager.hh
OccludedHbondSolEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
OccludedHbondSolEnergy.hhgeometric_solvation / DatabaseOccSolEne.fwd.hh
OccludedHbondSolEnergy.hhmethods / EnergyMethodOptions.fwd.hh
OccludedHbondSolEnergy_onebody.ccgeometric_solvation / DatabaseOccSolEne.hh
OccludedHbondSolEnergy_onebody.ccEnergies.hh
OccludedHbondSolEnergy_onebody.ccEnergyMap.hh
OccludedHbondSolEnergy_onebody.ccmethods / EnergyMethodOptions.hh
OccludedHbondSolEnergy_onebody.ccScoringManager.hh
OccludedHbondSolEnergy_onebody.ccTenANeighborGraph.hh
OccludedHbondSolEnergy_onebody.hhmethods / ContextDependentOneBodyEnergy.hh
OccludedHbondSolEnergy_onebody.hhgeometric_solvation / DatabaseOccSolEne.fwd.hh
OccludedHbondSolEnergy_onebody.hhmethods / EnergyMethodOptions.fwd.hh
OccludedHbondSolEnergy_onebodyCreator.hhmethods / EnergyMethod.fwd.hh
OccludedHbondSolEnergy_onebodyCreator.hhmethods / EnergyMethodCreator.hh
OccludedHbondSolEnergy_onebodyCreator.hhmethods / EnergyMethodOptions.fwd.hh
OccludedHbondSolEnergyCreator.hhmethods / EnergyMethod.fwd.hh
OccludedHbondSolEnergyCreator.hhmethods / EnergyMethodCreator.hh
OccludedHbondSolEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
OmegaTetherEnergy.ccEnergyMap.hh
OmegaTetherEnergy.ccOmegaTether.hh
OmegaTetherEnergy.ccScoringManager.hh
OmegaTetherEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
OmegaTetherEnergy.hhMinimizationData.fwd.hh
OmegaTetherEnergy.hhOmegaTether.fwd.hh
OmegaTetherEnergy.hhScoreFunction.fwd.hh
OmegaTetherEnergyCreator.hhmethods / EnergyMethod.fwd.hh
OmegaTetherEnergyCreator.hhmethods / EnergyMethodCreator.hh
OmegaTetherEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
OtherPoseEnergy.ccEnergyMap.hh
OtherPoseEnergy.ccScoreFunction.hh
OtherPoseEnergy.hhmethods / WholeStructureEnergy.hh
OtherPoseEnergyCreator.hhmethods / EnergyMethod.fwd.hh
OtherPoseEnergyCreator.hhmethods / EnergyMethodCreator.hh
OtherPoseEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
P_AA_Energy.ccmethods / ContextIndependentOneBodyEnergy.hh
P_AA_Energy.ccEnergyMap.hh
P_AA_Energy.ccP_AA.hh
P_AA_Energy.ccScoringManager.hh
P_AA_Energy.hhmethods / ContextIndependentOneBodyEnergy.hh
P_AA_Energy.hhP_AA.fwd.hh
P_AA_Energy.hhScoreFunction.fwd.hh
P_AA_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
P_AA_EnergyCreator.hhmethods / EnergyMethodCreator.hh
P_AA_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
P_AA_pp_Energy.ccmethods / ContextIndependentOneBodyEnergy.hh
P_AA_pp_Energy.ccEnergyMap.hh
P_AA_pp_Energy.ccP_AA.hh
P_AA_pp_Energy.ccScoringManager.hh
P_AA_pp_Energy.hhmethods / ContextIndependentOneBodyEnergy.hh
P_AA_pp_Energy.hhMinimizationData.fwd.hh
P_AA_pp_Energy.hhP_AA.fwd.hh
P_AA_pp_Energy.hhScoreFunction.fwd.hh
P_AA_pp_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
P_AA_pp_EnergyCreator.hhmethods / EnergyMethodCreator.hh
P_AA_pp_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
P_AA_ss_Energy.ccmethods / ContextIndependentOneBodyEnergy.hh
P_AA_ss_Energy.ccdssp / Dssp.hh
P_AA_ss_Energy.ccEnergies.hh
P_AA_ss_Energy.ccEnergyMap.hh
P_AA_ss_Energy.ccP_AA_ss.hh
P_AA_ss_Energy.ccScoringManager.hh
P_AA_ss_Energy.hhmethods / ContextIndependentOneBodyEnergy.hh
P_AA_ss_Energy.hhP_AA_ss.fwd.hh
P_AA_ss_Energy.hhScoreFunction.fwd.hh
P_AA_ss_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
P_AA_ss_EnergyCreator.hhmethods / EnergyMethodCreator.hh
P_AA_ss_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
PackStatEnergy.ccpackstat / compute_sasa.hh
PackStatEnergy.ccEnergyMap.hh
PackStatEnergy.hhEnergyMap.fwd.hh
PackStatEnergy.hhScoreFunction.fwd.hh
PackStatEnergy.hhScoreType.hh
PackStatEnergy.hhmethods / WholeStructureEnergy.hh
PackStatEnergyCreator.hhmethods / EnergyMethod.fwd.hh
PackStatEnergyCreator.hhmethods / EnergyMethodCreator.hh
PackStatEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
PairEnergy.ccContextGraphTypes.hh
PairEnergy.ccDerivVectorPair.hh
PairEnergy.ccEnergies.hh
PairEnergy.ccPairEPotential.hh
PairEnergy.ccScoringManager.hh
PairEnergy.ccTenANeighborGraph.hh
PairEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
PairEnergy.hhEnergyMap.fwd.hh
PairEnergy.hhMinimizationData.fwd.hh
PairEnergy.hhPairEPotential.fwd.hh
PairEnergy.hhScoreFunction.fwd.hh
PairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
PairEnergyCreator.hhmethods / EnergyMethodCreator.hh
PairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
PeptideBondEnergy.ccEnergyMap.hh
PeptideBondEnergy.ccfunc / GaussianFunc.hh
PeptideBondEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
PeptideBondEnergy.hhEnergyMap.fwd.hh
PeptideBondEnergy.hhScoreFunction.fwd.hh
PeptideBondEnergyCreator.hhmethods / EnergyMethod.fwd.hh
PeptideBondEnergyCreator.hhmethods / EnergyMethodCreator.hh
PeptideBondEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
pHEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
pHEnergy.ccEnergyMap.hh
pHEnergy.ccScoreType.hh
pHEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
pHEnergy.hhScoreFunction.fwd.hh
pHEnergyCreator.hhmethods / EnergyMethod.fwd.hh
pHEnergyCreator.hhmethods / EnergyMethodCreator.hh
pHEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
PointWaterEnergy.ccetable / count_pair / CountPairAll.hh
PointWaterEnergy.ccetable / count_pair / CountPairFactory.hh
PointWaterEnergy.ccetable / count_pair / CountPairFunction.hh
PointWaterEnergy.ccetable / count_pair / CountPairNone.hh
PointWaterEnergy.ccDerivVectorPair.hh
PointWaterEnergy.ccEnergies.hh
PointWaterEnergy.ccEnergiesCacheableDataType.hh
PointWaterEnergy.ccEnergyGraph.hh
PointWaterEnergy.ccmethods / EnergyMethodOptions.hh
PointWaterEnergy.ccMinimizationData.hh
PointWaterEnergy.ccNeighborList.tmpl.hh
PointWaterEnergy.ccPointWaterPotential.hh
PointWaterEnergy.ccResidueNeighborList.hh
PointWaterEnergy.ccScoreFunction.hh
PointWaterEnergy.ccScoringManager.hh
PointWaterEnergy.ccetable / count_pair / types.hh
PointWaterEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
PointWaterEnergy.hhmethods / EnergyMethodOptions.fwd.hh
PointWaterEnergy.hhPointWaterPotential.hh
PointWaterEnergy.hhtrie / RotamerTrieBase.fwd.hh
PointWaterEnergy.hhtrie / TrieCountPairBase.fwd.hh
PointWaterEnergyCreator.hhmethods / EnergyMethod.fwd.hh
PointWaterEnergyCreator.hhmethods / EnergyMethodCreator.hh
PointWaterEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
PoissonBoltzmannEnergy.ccEnergies.hh
PoissonBoltzmannEnergy.ccEnergyMap.hh
PoissonBoltzmannEnergy.ccmethods / EnergyMethodOptions.hh
PoissonBoltzmannEnergy.ccmethods / Methods.hh
PoissonBoltzmannEnergy.ccOneToAllEnergyContainer.hh
PoissonBoltzmannEnergy.ccPoissonBoltzmannPotential.hh
PoissonBoltzmannEnergy.ccScoreFunction.hh
PoissonBoltzmannEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
PoissonBoltzmannEnergy.hhmethods / EnergyMethod.fwd.hh
PoissonBoltzmannEnergy.hhPoissonBoltzmannPotential.fwd.hh
PoissonBoltzmannEnergy.hhScoreFunction.fwd.hh
PoissonBoltzmannEnergyCreator.hhmethods / EnergyMethod.fwd.hh
PoissonBoltzmannEnergyCreator.hhmethods / EnergyMethodCreator.hh
PoissonBoltzmannEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ProClosureEnergy.ccDerivVectorPair.hh
ProClosureEnergy.ccEnergyMap.hh
ProClosureEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
ProClosureEnergy.hhMinimizationData.fwd.hh
ProClosureEnergy.hhScoreFunction.fwd.hh
ProClosureEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ProClosureEnergyCreator.hhmethods / EnergyMethodCreator.hh
ProClosureEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ProQ_Energy.ccContextGraphTypes.hh
ProQ_Energy.ccdssp / Dssp.hh
ProQ_Energy.ccEnergies.hh
ProQ_Energy.ccEnergyMap.hh
ProQ_Energy.ccmethods / EnergyMethodOptions.hh
ProQ_Energy.ccsasa.hh
ProQ_Energy.ccScoreFunction.hh
ProQ_Energy.ccScoringManager.hh
ProQ_Energy.ccTwelveANeighborGraph.hh
ProQ_Energy.hhdssp / Dssp.hh
ProQ_Energy.hhMembraneTopology.hh
ProQ_Energy.hhProQPotential.hh
ProQ_Energy.hhScoreFunction.fwd.hh
ProQ_Energy.hhScoreType.hh
ProQ_Energy.hhmethods / WholeStructureEnergy.hh
ProQ_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
ProQ_EnergyCreator.hhmethods / EnergyMethodCreator.hh
ProQ_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
PyEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
PyEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
PyEnergy.hhmethods / EnergyMethodCreator.hh
RamachandranEnergy.ccEnergyMap.hh
RamachandranEnergy.ccRamachandran.hh
RamachandranEnergy.ccScoringManager.hh
RamachandranEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
RamachandranEnergy.hhMinimizationData.fwd.hh
RamachandranEnergy.hhRamachandran.fwd.hh
RamachandranEnergy.hhScoreFunction.fwd.hh
RamachandranEnergy2B.ccEnergyMap.hh
RamachandranEnergy2B.ccRamachandran2B.hh
RamachandranEnergy2B.ccScoringManager.hh
RamachandranEnergy2B.hhmethods / ContextIndependentTwoBodyEnergy.hh
RamachandranEnergy2B.hhRamachandran2B.fwd.hh
RamachandranEnergy2B.hhScoreFunction.fwd.hh
RamachandranEnergy2BCreator.hhmethods / EnergyMethod.fwd.hh
RamachandranEnergy2BCreator.hhmethods / EnergyMethodCreator.hh
RamachandranEnergy2BCreator.hhmethods / EnergyMethodOptions.fwd.hh
RamachandranEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RamachandranEnergyCreator.hhmethods / EnergyMethodCreator.hh
RamachandranEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RamaPreProEnergy.ccDerivVectorPair.hh
RamaPreProEnergy.ccEnergies.hh
RamaPreProEnergy.ccEnergyMap.hh
RamaPreProEnergy.ccmethods / EnergyMethodOptions.hh
RamaPreProEnergy.ccPolymerBondedEnergyContainer.hh
RamaPreProEnergy.ccRamaPrePro.hh
RamaPreProEnergy.ccScoringManager.hh
RamaPreProEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
RamaPreProEnergy.hhmethods / EnergyMethodOptions.fwd.hh
RamaPreProEnergy.hhRamaPrePro.fwd.hh
RamaPreProEnergy.hhScoreFunction.fwd.hh
RamaPreProEnergy.hhmethods / util.hh
RamaPreProEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RamaPreProEnergyCreator.hhmethods / EnergyMethodCreator.hh
RamaPreProEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ReferenceEnergy.ccEnergyMap.hh
ReferenceEnergy.ccmethods / EnergyMethodOptions.hh
ReferenceEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
ReferenceEnergy.hhScoreFunction.fwd.hh
ReferenceEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ReferenceEnergyCreator.hhmethods / EnergyMethodCreator.hh
ReferenceEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
ReferenceEnergyNoncanonical.ccEnergyMap.hh
ReferenceEnergyNoncanonical.ccmethods / EnergyMethodOptions.hh
ReferenceEnergyNoncanonical.hhmethods / ContextIndependentOneBodyEnergy.hh
ReferenceEnergyNoncanonical.hhScoreFunction.fwd.hh
ReferenceEnergyNoncanonicalCreator.hhmethods / EnergyMethod.fwd.hh
ReferenceEnergyNoncanonicalCreator.hhmethods / EnergyMethodCreator.hh
ReferenceEnergyNoncanonicalCreator.hhmethods / EnergyMethodOptions.fwd.hh
ResidualDipolarCouplingEnergy.ccEnergyMap.hh
ResidualDipolarCouplingEnergy.ccResidualDipolarCoupling.fwd.hh
ResidualDipolarCouplingEnergy.ccResidualDipolarCoupling.hh
ResidualDipolarCouplingEnergy.ccScoreType.hh
ResidualDipolarCouplingEnergy.hhResidualDipolarCoupling.fwd.hh
ResidualDipolarCouplingEnergy.hhScoreFunction.fwd.hh
ResidualDipolarCouplingEnergy.hhScoreType.hh
ResidualDipolarCouplingEnergy.hhmethods / WholeStructureEnergy.hh
ResidualDipolarCouplingEnergy_Rohl.ccEnergyMap.hh
ResidualDipolarCouplingEnergy_Rohl.ccResidualDipolarCoupling_Rohl.fwd.hh
ResidualDipolarCouplingEnergy_Rohl.ccResidualDipolarCoupling_Rohl.hh
ResidualDipolarCouplingEnergy_Rohl.hhResidualDipolarCoupling_Rohl.fwd.hh
ResidualDipolarCouplingEnergy_Rohl.hhScoreFunction.fwd.hh
ResidualDipolarCouplingEnergy_Rohl.hhScoreType.hh
ResidualDipolarCouplingEnergy_Rohl.hhmethods / WholeStructureEnergy.hh
ResidualDipolarCouplingEnergy_RohlCreator.hhmethods / EnergyMethod.fwd.hh
ResidualDipolarCouplingEnergy_RohlCreator.hhmethods / EnergyMethodCreator.hh
ResidualDipolarCouplingEnergy_RohlCreator.hhmethods / EnergyMethodOptions.fwd.hh
ResidualDipolarCouplingEnergyCreator.hhmethods / EnergyMethod.fwd.hh
ResidualDipolarCouplingEnergyCreator.hhmethods / EnergyMethodCreator.hh
ResidualDipolarCouplingEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RG_Energy_Fast.ccEnergyMap.hh
RG_Energy_Fast.hhScoreFunction.fwd.hh
RG_Energy_Fast.hhScoreType.hh
RG_Energy_Fast.hhmethods / WholeStructureEnergy.hh
RG_Energy_FastCreator.hhmethods / EnergyMethod.fwd.hh
RG_Energy_FastCreator.hhmethods / EnergyMethodCreator.hh
RG_Energy_FastCreator.hhmethods / EnergyMethodOptions.fwd.hh
RG_Energy_RNA.ccEnergyMap.hh
RG_Energy_RNA.ccrna / RNA_CentroidInfo.hh
RG_Energy_RNA.ccrna / RNA_ScoringInfo.hh
RG_Energy_RNA.hhScoreFunction.fwd.hh
RG_Energy_RNA.hhScoreType.hh
RG_Energy_RNA.hhmethods / WholeStructureEnergy.hh
RG_Energy_RNACreator.hhmethods / EnergyMethod.fwd.hh
RG_Energy_RNACreator.hhmethods / EnergyMethodCreator.hh
RG_Energy_RNACreator.hhmethods / EnergyMethodOptions.fwd.hh
RG_LocalEnergy.ccEnergyMap.hh
RG_LocalEnergy.hhScoreFunction.fwd.hh
RG_LocalEnergy.hhScoreType.hh
RG_LocalEnergy.hhmethods / WholeStructureEnergy.hh
RG_LocalEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RG_LocalEnergyCreator.hhmethods / EnergyMethodCreator.hh
RG_LocalEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RingClosureEnergy.ccDerivVectorPair.hh
RingClosureEnergy.ccEnergyMap.hh
RingClosureEnergy.ccScoringManager.hh
RingClosureEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
RingClosureEnergy.hhMinimizationData.fwd.hh
RingClosureEnergy.hhScoreFunction.fwd.hh
RingClosureEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RingClosureEnergyCreator.hhmethods / EnergyMethodCreator.hh
RingClosureEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RMS_Energy.ccEnergyMap.hh
RMS_Energy.ccrms_util.hh
RMS_Energy.hhScoreFunction.fwd.hh
RMS_Energy.hhScoreType.hh
RMS_Energy.hhmethods / WholeStructureEnergy.hh
RMS_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
RMS_EnergyCreator.hhmethods / EnergyMethodCreator.hh
RMS_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_BulgeEnergy.ccEnergyMap.hh
RNA_BulgeEnergy.ccScoreType.hh
RNA_BulgeEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
RNA_BulgeEnergy.hhScoreFunction.fwd.hh
RNA_BulgeEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_BulgeEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_BulgeEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_ChemicalMappingEnergy.ccEnergyGraph.hh
RNA_ChemicalMappingEnergy.ccrna / data / RNA_DMS_LowResolutionPotential.hh
RNA_ChemicalMappingEnergy.ccrna / data / RNA_DMS_Potential.hh
RNA_ChemicalMappingEnergy.ccrna / RNA_ScoringInfo.hh
RNA_ChemicalMappingEnergy.ccScoreFunction.hh
RNA_ChemicalMappingEnergy.ccScoringManager.hh
RNA_ChemicalMappingEnergy.hhrna / data / RNA_DMS_LowResolutionPotential.fwd.hh
RNA_ChemicalMappingEnergy.hhrna / data / RNA_DMS_Potential.fwd.hh
RNA_ChemicalMappingEnergy.hhmethods / WholeStructureEnergy.hh
RNA_ChemicalMappingEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_ChemicalMappingEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_ChemicalMappingEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_ChemicalShiftEnergy.ccEnergyMap.hh
RNA_ChemicalShiftEnergy.ccScoringManager.hh
RNA_ChemicalShiftEnergy.hhrna / chemical_shift / RNA_ChemicalShiftPotential.hh
RNA_ChemicalShiftEnergy.hhScoreType.hh
RNA_ChemicalShiftEnergy.hhmethods / WholeStructureEnergy.hh
RNA_ChemicalShiftEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_CoarseDistEnergy.ccetable / count_pair / CountPairAll.hh
RNA_CoarseDistEnergy.ccetable / count_pair / CountPairFactory.hh
RNA_CoarseDistEnergy.ccetable / count_pair / CountPairFunction.hh
RNA_CoarseDistEnergy.ccetable / count_pair / CountPairNone.hh
RNA_CoarseDistEnergy.ccDerivVectorPair.hh
RNA_CoarseDistEnergy.ccEnergies.hh
RNA_CoarseDistEnergy.ccmethods / EnergyMethod.hh
RNA_CoarseDistEnergy.ccmethods / EnergyMethodCreator.hh
RNA_CoarseDistEnergy.ccMinimizationData.hh
RNA_CoarseDistEnergy.ccNeighborList.hh
RNA_CoarseDistEnergy.ccOneDDistPotential.hh
RNA_CoarseDistEnergy.ccResidueNeighborList.hh
RNA_CoarseDistEnergy.ccScoreFunction.hh
RNA_CoarseDistEnergy.ccScoringManager.hh
RNA_CoarseDistEnergy.ccmethods / TwoBodyEnergy.hh
RNA_CoarseDistEnergy.ccetable / count_pair / types.hh
RNA_CoarseDistEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_CoarseDistEnergy.hhetable / count_pair / CountPairFunction.fwd.hh
RNA_CoarseDistEnergy.hhelec / CPRepMapType.fwd.hh
RNA_CoarseDistEnergy.hhDerivVectorPair.fwd.hh
RNA_CoarseDistEnergy.hhmethods / EnergyMethod.hh
RNA_CoarseDistEnergy.hhmethods / EnergyMethodCreator.hh
RNA_CoarseDistEnergy.hhmethods / EnergyMethodOptions.hh
RNA_CoarseDistEnergy.hhMinimizationData.fwd.hh
RNA_CoarseDistEnergy.hhOneDDistPotential.fwd.hh
RNA_CoarseDistEnergy.hhScoreFunction.fwd.hh
RNA_CoarseDistEnergyCreator.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_CoarseDistEnergyCreator.hhmethods / EnergyMethod.hh
RNA_CoarseDistEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_CoarseDistEnergyCreator.hhmethods / EnergyMethodOptions.hh
RNA_DataBackboneEnergy.ccEnergies.hh
RNA_DataBackboneEnergy.ccEnergyGraph.hh
RNA_DataBackboneEnergy.ccfunc / FadeFunc.hh
RNA_DataBackboneEnergy.ccrna / RNA_LowResolutionPotential.hh
RNA_DataBackboneEnergy.ccrna / RNA_ScoringInfo.hh
RNA_DataBackboneEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_DataBackboneEnergy.hhfunc / Func.fwd.hh
RNA_DataBackboneEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_DataBackboneEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_DataBackboneEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_FA_ElecEnergy.ccetable / count_pair / CountPairFactory.hh
RNA_FA_ElecEnergy.ccetable / count_pair / CountPairFunction.hh
RNA_FA_ElecEnergy.ccDerivVectorPair.hh
RNA_FA_ElecEnergy.ccEnergies.hh
RNA_FA_ElecEnergy.ccEnergyGraph.hh
RNA_FA_ElecEnergy.ccMinimizationData.hh
RNA_FA_ElecEnergy.ccNeighborList.tmpl.hh
RNA_FA_ElecEnergy.ccResidueNeighborList.hh
RNA_FA_ElecEnergy.ccScoreFunction.hh
RNA_FA_ElecEnergy.ccetable / count_pair / types.hh
RNA_FA_ElecEnergy.hhmethods / EnergyMethod.fwd.hh
RNA_FA_ElecEnergy.hhmethods / EnergyMethodOptions.fwd.hh
RNA_FA_ElecEnergy.hhelec / FA_ElecEnergy.hh
RNA_FA_ElecEnergy.hhMinimizationData.fwd.hh
RNA_FA_ElecEnergy.hhScoreFunction.fwd.hh
RNA_FA_ElecEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_FA_ElecEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_FA_ElecEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_FullAtomStackingEnergy.ccetable / count_pair / CountPairAll.hh
RNA_FullAtomStackingEnergy.ccetable / count_pair / CountPairFactory.hh
RNA_FullAtomStackingEnergy.ccetable / count_pair / CountPairFunction.hh
RNA_FullAtomStackingEnergy.ccetable / count_pair / CountPairNone.hh
RNA_FullAtomStackingEnergy.ccEnergies.hh
RNA_FullAtomStackingEnergy.ccEnergyGraph.hh
RNA_FullAtomStackingEnergy.ccmethods / EnergyMethodOptions.hh
RNA_FullAtomStackingEnergy.ccNeighborList.tmpl.hh
RNA_FullAtomStackingEnergy.ccrna / RNA_ScoringInfo.hh
RNA_FullAtomStackingEnergy.hhmethods / ContextDependentTwoBodyEnergy.hh
RNA_FullAtomStackingEnergy.hhetable / count_pair / CountPairFunction.fwd.hh
RNA_FullAtomStackingEnergy.hhmethods / EnergyMethodOptions.fwd.hh
RNA_FullAtomStackingEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_FullAtomStackingEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_FullAtomStackingEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_FullAtomVDW_BasePhosphate.ccetable / BaseEtableEnergy.hh
RNA_FullAtomVDW_BasePhosphate.ccEnergies.hh
RNA_FullAtomVDW_BasePhosphate.ccEnergyMap.hh
RNA_FullAtomVDW_BasePhosphate.ccetable / Etable.hh
RNA_FullAtomVDW_BasePhosphate.ccetable / EtableEnergy.hh
RNA_FullAtomVDW_BasePhosphate.ccNeighborList.hh
RNA_FullAtomVDW_BasePhosphate.ccScoringManager.hh
RNA_FullAtomVDW_BasePhosphate.cctypes.hh
RNA_FullAtomVDW_BasePhosphate.hhmethods / ContextIndependentOneBodyEnergy.hh
RNA_FullAtomVDW_BasePhosphate.hhmethods / EnergyMethodOptions.hh
RNA_FullAtomVDW_BasePhosphate.hhetable / EtableEnergy.hh
RNA_FullAtomVDW_BasePhosphate.hhScoreFunction.fwd.hh
RNA_FullAtomVDW_BasePhosphateCreator.hhmethods / EnergyMethodCreator.hh
RNA_JR_SuiteEnergy.ccEnergyMap.hh
RNA_JR_SuiteEnergy.ccScoringManager.hh
RNA_JR_SuiteEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_JR_SuiteEnergy.hhetable / Etable.fwd.hh
RNA_JR_SuiteEnergy.hhScoreFunction.fwd.hh
RNA_JR_SuiteEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_JR_SuiteEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_JR_SuiteEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_LJ_BaseEnergy.ccetable / count_pair / CountPairFactory.hh
RNA_LJ_BaseEnergy.ccetable / count_pair / CountPairFunction.hh
RNA_LJ_BaseEnergy.ccEnergies.hh
RNA_LJ_BaseEnergy.ccEnergyGraph.hh
RNA_LJ_BaseEnergy.ccmethods / EnergyMethodOptions.hh
RNA_LJ_BaseEnergy.ccetable / Etable.hh
RNA_LJ_BaseEnergy.ccScoringManager.hh
RNA_LJ_BaseEnergy.ccetable / count_pair / types.hh
RNA_LJ_BaseEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_LJ_BaseEnergy.hhetable / Etable.fwd.hh
RNA_LJ_BaseEnergy.hhScoreFunction.fwd.hh
RNA_LJ_BaseEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_LJ_BaseEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_LJ_BaseEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_MgPointEnergy.ccEnergies.hh
RNA_MgPointEnergy.ccEnergyGraph.hh
RNA_MgPointEnergy.ccmagnesium / MgKnowledgeBasedPotential.hh
RNA_MgPointEnergy.ccrna / RNA_ScoringInfo.hh
RNA_MgPointEnergy.ccScoringManager.hh
RNA_MgPointEnergy.ccmagnesium / util.hh
RNA_MgPointEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_MgPointEnergy.hhmagnesium / MgKnowledgeBasedPotential.fwd.hh
RNA_MgPointEnergy.hhrna / RNA_ScoringInfo.hh
RNA_MgPointEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_MgPointEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_MgPointEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_PairwiseLowResolutionEnergy.ccEnergies.hh
RNA_PairwiseLowResolutionEnergy.ccEnergyGraph.hh
RNA_PairwiseLowResolutionEnergy.ccrna / RNA_LowResolutionPotential.hh
RNA_PairwiseLowResolutionEnergy.ccrna / RNA_Motif.hh
RNA_PairwiseLowResolutionEnergy.ccrna / RNA_ScoringInfo.hh
RNA_PairwiseLowResolutionEnergy.ccScoreFunction.hh
RNA_PairwiseLowResolutionEnergy.ccScoringManager.hh
RNA_PairwiseLowResolutionEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_PairwiseLowResolutionEnergy.hhrna / RNA_LowResolutionPotential.fwd.hh
RNA_PairwiseLowResolutionEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_PairwiseLowResolutionEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_PairwiseLowResolutionEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_PartitionEnergy.ccEnergyMap.hh
RNA_PartitionEnergy.hhannealing / ResidueArrayAnnealableEnergy.hh
RNA_PartitionEnergy.hhScoreFunction.fwd.hh
RNA_PartitionEnergy.hhScoreType.hh
RNA_PartitionEnergy.hhmethods / WholeStructureEnergy.hh
RNA_PartitionEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_PartitionEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_PartitionEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_StubCoordinateEnergy.ccDenseEnergyContainer.hh
RNA_StubCoordinateEnergy.ccEnergies.hh
RNA_StubCoordinateEnergy.ccEnergyGraph.hh
RNA_StubCoordinateEnergy.ccfunc / HarmonicFunc.hh
RNA_StubCoordinateEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
RNA_StubCoordinateEnergy.hhfunc / Func.fwd.hh
RNA_StubCoordinateEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_StubCoordinateEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_StubCoordinateEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_SugarCloseEnergy.ccconstraints / AngleConstraint.hh
RNA_SugarCloseEnergy.ccconstraints / AtomPairConstraint.hh
RNA_SugarCloseEnergy.ccconstraints / ConstraintSet.hh
RNA_SugarCloseEnergy.ccfunc / FadeFunc.hh
RNA_SugarCloseEnergy.ccfunc / HarmonicFunc.fwd.hh
RNA_SugarCloseEnergy.ccfunc / HarmonicFunc.hh
RNA_SugarCloseEnergy.hhconstraints / ConstraintSet.fwd.hh
RNA_SugarCloseEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
RNA_SugarCloseEnergy.hhfunc / FadeFunc.hh
RNA_SugarCloseEnergy.hhfunc / HarmonicFunc.fwd.hh
RNA_SugarCloseEnergy.hhScoreFunction.fwd.hh
RNA_SugarCloseEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_SuiteEnergy.ccDerivVectorPair.hh
RNA_SuiteEnergy.ccEnergies.hh
RNA_SuiteEnergy.ccEnergyMap.hh
RNA_SuiteEnergy.ccmethods / EnergyMethodOptions.hh
RNA_SuiteEnergy.ccPolymerBondedEnergyContainer.hh
RNA_SuiteEnergy.ccrna / RNA_EnergyMethodOptions.hh
RNA_SuiteEnergy.ccScoreFunction.hh
RNA_SuiteEnergy.ccScoringManager.hh
RNA_SuiteEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
RNA_SuiteEnergy.hhrna / RNA_EnergyMethodOptions.fwd.hh
RNA_SuiteEnergy.hhrna / RNA_SuitePotential.hh
RNA_SuiteEnergy.hhScoreFunction.fwd.hh
RNA_SuiteEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_SuiteEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_SuiteEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_TorsionEnergy.ccEnergyMap.hh
RNA_TorsionEnergy.ccmethods / EnergyMethodOptions.hh
RNA_TorsionEnergy.ccrna / RNA_EnergyMethodOptions.hh
RNA_TorsionEnergy.ccrna / RNA_TorsionPotential.hh
RNA_TorsionEnergy.ccScoringManager.hh
RNA_TorsionEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_TorsionEnergy.hhrna / RNA_EnergyMethodOptions.fwd.hh
RNA_TorsionEnergy.hhrna / RNA_TorsionPotential.hh
RNA_TorsionEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_TorsionEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_TorsionEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNA_VDW_Energy.ccEnergies.hh
RNA_VDW_Energy.ccEnergyGraph.hh
RNA_VDW_Energy.ccrna / RNA_AtomVDW.hh
RNA_VDW_Energy.ccrna / RNA_ScoringInfo.hh
RNA_VDW_Energy.ccScoringManager.hh
RNA_VDW_Energy.ccrna / util.hh
RNA_VDW_Energy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNA_VDW_Energy.hhrna / RNA_AtomVDW.fwd.hh
RNA_VDW_Energy.hhrna / RNA_ScoringInfo.hh
RNA_VDW_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNA_VDW_EnergyCreator.hhmethods / EnergyMethodCreator.hh
RNA_VDW_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNP_LowResEnergy.ccetable / count_pair / CountPairAll.hh
RNP_LowResEnergy.ccetable / count_pair / CountPairFactory.hh
RNP_LowResEnergy.ccetable / count_pair / CountPairFunction.hh
RNP_LowResEnergy.ccetable / count_pair / CountPairNone.hh
RNP_LowResEnergy.ccEnergies.hh
RNP_LowResEnergy.ccEnergyGraph.hh
RNP_LowResEnergy.ccNeighborList.tmpl.hh
RNP_LowResEnergy.ccrna / RNA_ScoringInfo.hh
RNP_LowResEnergy.ccrna / RNP_LowResPotential.hh
RNP_LowResEnergy.ccScoringManager.hh
RNP_LowResEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNP_LowResEnergy.hhrna / RNA_LowResolutionPotential.fwd.hh
RNP_LowResEnergy.hhrna / RNP_LowResPotential.fwd.hh
RNP_LowResEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNP_LowResEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNP_LowResEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNP_LowResPairDistEnergy.ccetable / count_pair / CountPairAll.hh
RNP_LowResPairDistEnergy.ccetable / count_pair / CountPairFactory.hh
RNP_LowResPairDistEnergy.ccetable / count_pair / CountPairFunction.hh
RNP_LowResPairDistEnergy.ccetable / count_pair / CountPairNone.hh
RNP_LowResPairDistEnergy.ccEnergies.hh
RNP_LowResPairDistEnergy.ccEnergyGraph.hh
RNP_LowResPairDistEnergy.ccNeighborList.tmpl.hh
RNP_LowResPairDistEnergy.ccrna / RNA_ScoringInfo.hh
RNP_LowResPairDistEnergy.ccrna / RNP_LowResPairDistPotential.hh
RNP_LowResPairDistEnergy.ccScoringManager.hh
RNP_LowResPairDistEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNP_LowResPairDistEnergy.hhrna / RNA_LowResolutionPotential.fwd.hh
RNP_LowResPairDistEnergy.hhrna / RNP_LowResPairDistPotential.fwd.hh
RNP_LowResPairDistEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNP_LowResPairDistEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNP_LowResPairDistEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
RNP_LowResStackEnergy.ccetable / count_pair / CountPairAll.hh
RNP_LowResStackEnergy.ccetable / count_pair / CountPairFactory.hh
RNP_LowResStackEnergy.ccetable / count_pair / CountPairFunction.hh
RNP_LowResStackEnergy.ccetable / count_pair / CountPairNone.hh
RNP_LowResStackEnergy.ccEnergies.hh
RNP_LowResStackEnergy.ccEnergyGraph.hh
RNP_LowResStackEnergy.ccNeighborList.tmpl.hh
RNP_LowResStackEnergy.ccrna / RNA_ScoringInfo.hh
RNP_LowResStackEnergy.ccrna / RNP_LowResStackData.hh
RNP_LowResStackEnergy.ccScoringManager.hh
RNP_LowResStackEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
RNP_LowResStackEnergy.hhrna / RNA_LowResolutionPotential.fwd.hh
RNP_LowResStackEnergy.hhrna / RNP_LowResStackData.fwd.hh
RNP_LowResStackEnergyCreator.hhmethods / EnergyMethod.fwd.hh
RNP_LowResStackEnergyCreator.hhmethods / EnergyMethodCreator.hh
RNP_LowResStackEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SA_Energy.ccEnergyMap.hh
SA_Energy.ccsasa.hh
SA_Energy.hhScoreFunction.fwd.hh
SA_Energy.hhScoreType.hh
SA_Energy.hhmethods / WholeStructureEnergy.hh
SA_EnergyCreator.hhmethods / EnergyMethod.fwd.hh
SA_EnergyCreator.hhmethods / EnergyMethodCreator.hh
SA_EnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SASAEnergy.ccDenseEnergyContainer.hh
SASAEnergy.ccEnergies.hh
SASAEnergy.ccmethods / EnergyMethodOptions.hh
SASAEnergy.ccMinimizationData.hh
SASAEnergy.ccSASAPotential.hh
SASAEnergy.ccScoreFunction.hh
SASAEnergy.ccScoringManager.hh
SASAEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
SASAEnergy.hhEnergyMap.fwd.hh
SASAEnergy.hhmethods / EnergyMethodOptions.fwd.hh
SASAEnergy.hhSASAPotential.fwd.hh
SASAEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SASAEnergyCreator.hhmethods / EnergyMethodCreator.hh
SASAEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SAXSEnergy.ccsaxs / DistanceHistogram.hh
SAXSEnergy.ccEnergyMap.hh
SAXSEnergy.ccsaxs / FormFactor.hh
SAXSEnergy.ccsaxs / FormFactorManager.hh
SAXSEnergy.ccScoreType.hh
SAXSEnergy.ccsaxs / SinXOverX.hh
SAXSEnergy.ccmethods / WholeStructureEnergy.hh
SAXSEnergy.hhsaxs / DistanceHistogram.hh
SAXSEnergy.hhsaxs / FormFactor.hh
SAXSEnergy.hhsaxs / FormFactorManager.fwd.hh
SAXSEnergy.hhScoreFunction.fwd.hh
SAXSEnergy.hhScoreType.hh
SAXSEnergy.hhmethods / WholeStructureEnergy.hh
SAXSEnergyCEN.hhsaxs / FormFactor.hh
SAXSEnergyCEN.hhScoreFunction.fwd.hh
SAXSEnergyCEN.hhScoreType.hh
SAXSEnergyCEN.hhmethods / WholeStructureEnergy.hh
SAXSEnergyCreator.hhmethods / EnergyMethodCreator.hh
SAXSEnergyFA.hhsaxs / DistanceHistogram.fwd.hh
SAXSEnergyFA.hhsaxs / DistanceHistogram.hh
SAXSEnergyFA.hhEnergyMap.fwd.hh
SAXSEnergyFA.hhmethods / EnergyMethod.fwd.hh
SAXSEnergyFA.hhmethods / EnergyMethod.hh
SAXSEnergyFA.hhmethods / EnergyMethodCreator.fwd.hh
SAXSEnergyFA.hhmethods / EnergyMethodCreator.hh
SAXSEnergyFA.hhmethods / EnergyMethodOptions.fwd.hh
SAXSEnergyFA.hhsaxs / FormFactor.fwd.hh
SAXSEnergyFA.hhsaxs / FormFactor.hh
SAXSEnergyFA.hhsaxs / FormFactorManager.fwd.hh
SAXSEnergyFA.hhScoreFunction.fwd.hh
SAXSEnergyFA.hhScoreType.hh
SAXSEnergyFA.hhmethods / WholeStructureEnergy.fwd.hh
SAXSEnergyFA.hhmethods / WholeStructureEnergy.hh
SecondaryStructureEnergy.ccmethods / EnergyMethodOptions.hh
SecondaryStructureEnergy.ccScoreFunction.hh
SecondaryStructureEnergy.ccScoringManager.hh
SecondaryStructureEnergy.ccSecondaryStructurePotential.hh
SecondaryStructureEnergy.hhSecondaryStructurePotential.fwd.hh
SecondaryStructureEnergy.hhmethods / WholeStructureEnergy.hh
SecondaryStructureEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SecondaryStructureEnergyCreator.hhmethods / EnergyMethodCreator.hh
SecondaryStructureEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SequenceDependentRefEnergy.ccEnergyMap.hh
SequenceDependentRefEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
SequenceDependentRefEnergy.hhScoreFunction.fwd.hh
SequenceDependentRefEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SequenceDependentRefEnergyCreator.hhmethods / EnergyMethodCreator.hh
SequenceDependentRefEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SmoothCenPairEnergy.ccDerivVectorPair.hh
SmoothCenPairEnergy.ccEnergyMap.hh
SmoothCenPairEnergy.ccScoringManager.hh
SmoothCenPairEnergy.ccSmoothEnvPairPotential.hh
SmoothCenPairEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
SmoothCenPairEnergy.hhScoreFunction.fwd.hh
SmoothCenPairEnergy.hhSmoothEnvPairPotential.fwd.hh
SmoothCenPairEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SmoothCenPairEnergyCreator.hhmethods / EnergyMethodCreator.hh
SmoothCenPairEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SmoothEnvEnergy.ccDerivVectorPair.hh
SmoothEnvEnergy.ccEnergyMap.hh
SmoothEnvEnergy.ccScoringManager.hh
SmoothEnvEnergy.ccSmoothEnvPairPotential.hh
SmoothEnvEnergy.hhmethods / ContextDependentOneBodyEnergy.hh
SmoothEnvEnergy.hhScoreFunction.fwd.hh
SmoothEnvEnergy.hhSmoothEnvPairPotential.fwd.hh
SmoothEnvEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SmoothEnvEnergyCreator.hhmethods / EnergyMethodCreator.hh
SmoothEnvEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SplitUnfoldedTwoBodyEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
SplitUnfoldedTwoBodyEnergy.ccEnergyMap.hh
SplitUnfoldedTwoBodyEnergy.ccmethods / EnergyMethodOptions.hh
SplitUnfoldedTwoBodyEnergy.ccScoringManager.hh
SplitUnfoldedTwoBodyEnergy.ccSplitUnfoldedTwoBodyPotential.hh
SplitUnfoldedTwoBodyEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
SplitUnfoldedTwoBodyEnergy.hhEnergyMap.hh
SplitUnfoldedTwoBodyEnergy.hhScoreFunction.fwd.hh
SplitUnfoldedTwoBodyEnergy.hhSplitUnfoldedTwoBodyPotential.hh
SplitUnfoldedTwoBodyEnergyCreator.ccEnergyMap.hh
SplitUnfoldedTwoBodyEnergyCreator.ccmethods / EnergyMethodOptions.hh
SplitUnfoldedTwoBodyEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SplitUnfoldedTwoBodyEnergyCreator.hhmethods / EnergyMethodCreator.hh
SplitUnfoldedTwoBodyEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SSElementMotifContactEnergy.ccdssp / Dssp.hh
SSElementMotifContactEnergy.ccEnergyMap.hh
SSElementMotifContactEnergy.ccmotif / motif_hash_stuff.hh
SSElementMotifContactEnergy.ccmotif / util.hh
SSElementMotifContactEnergy.hmotif / motif_hash_stuff.hh
SSElementMotifContactEnergy.hScoreFunction.fwd.hh
SSElementMotifContactEnergy.hScoreType.hh
SSElementMotifContactEnergy.hhmotif / motif_hash_stuff.hh
SSElementMotifContactEnergy.hhScoreFunction.fwd.hh
SSElementMotifContactEnergy.hhScoreType.hh
SSElementMotifContactEnergy.hhmethods / WholeStructureEnergy.hh
SSElementMotifContactEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SSElementMotifContactEnergyCreator.hhmethods / EnergyMethodCreator.hh
SSElementMotifContactEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
StackElecEnergy.ccetable / count_pair / CountPairAll.hh
StackElecEnergy.ccetable / count_pair / CountPairFactory.hh
StackElecEnergy.ccetable / count_pair / CountPairFunction.hh
StackElecEnergy.ccetable / count_pair / CountPairNone.hh
StackElecEnergy.ccDerivVectorPair.hh
StackElecEnergy.ccEnergies.hh
StackElecEnergy.ccEnergiesCacheableDataType.hh
StackElecEnergy.ccEnergyGraph.hh
StackElecEnergy.ccMinimizationData.hh
StackElecEnergy.ccNeighborList.tmpl.hh
StackElecEnergy.ccResidueNeighborList.hh
StackElecEnergy.ccrna / RNA_ScoringInfo.hh
StackElecEnergy.ccetable / count_pair / types.hh
StackElecEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
StackElecEnergy.hhetable / coulomb / Coulomb.hh
StackElecEnergyCreator.hhmethods / EnergyMethod.fwd.hh
StackElecEnergyCreator.hhmethods / EnergyMethodCreator.hh
StackElecEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SuckerEnergy.ccEnergyMap.hh
SuckerEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
SuckerEnergy.hhScoreFunction.fwd.hh
SuckerEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SuckerEnergyCreator.hhmethods / EnergyMethodCreator.hh
SuckerEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SugarBackboneEnergy.cccarbohydrates / CHIEnergyFunction.hh
SugarBackboneEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
SugarBackboneEnergy.ccEnergyMap.hh
SugarBackboneEnergy.cccarbohydrates / OmegaPreferencesFunction.hh
SugarBackboneEnergy.ccScoringManager.hh
SugarBackboneEnergy.cccarbohydrates / util.hh
SugarBackboneEnergy.hhcarbohydrates / CHIEnergyFunction.fwd.hh
SugarBackboneEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
SugarBackboneEnergy.hhcarbohydrates / OmegaPreferencesFunction.fwd.hh
SugarBackboneEnergy.hhScoreFunction.fwd.hh
SugarBackboneEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SugarBackboneEnergyCreator.hhmethods / EnergyMethodCreator.hh
SugarBackboneEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SurfEnergy.ccEnergyMap.hh
SurfEnergy.ccpacking / surf_vol.hh
SurfEnergy.hhScoreFunction.fwd.hh
SurfEnergy.hhScoreType.hh
SurfEnergy.hhmethods / WholeStructureEnergy.hh
SurfEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SurfEnergyCreator.hhmethods / EnergyMethodCreator.hh
SurfEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SurfVolEnergy.ccEnergyMap.hh
SurfVolEnergy.ccpacking / surf_vol.hh
SurfVolEnergy.hhScoreFunction.fwd.hh
SurfVolEnergy.hhScoreType.hh
SurfVolEnergy.hhmethods / WholeStructureEnergy.hh
SurfVolEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SurfVolEnergyCreator.hhmethods / EnergyMethodCreator.hh
SurfVolEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
SymmetricLigandEnergy.ccEnergyMap.hh
SymmetricLigandEnergy.ccScoreType.hh
SymmetricLigandEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
SymmetricLigandEnergy.hhScoreFunction.fwd.hh
SymmetricLigandEnergyCreator.hhmethods / EnergyMethod.fwd.hh
SymmetricLigandEnergyCreator.hhmethods / EnergyMethodCreator.hh
SymmetricLigandEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
TNA_SuiteEnergy.ccDerivVectorPair.hh
TNA_SuiteEnergy.ccEnergies.hh
TNA_SuiteEnergy.ccEnergyMap.hh
TNA_SuiteEnergy.ccmethods / EnergyMethodOptions.hh
TNA_SuiteEnergy.ccPolymerBondedEnergyContainer.hh
TNA_SuiteEnergy.ccrna / RNA_EnergyMethodOptions.hh
TNA_SuiteEnergy.ccScoreFunction.hh
TNA_SuiteEnergy.ccScoringManager.hh
TNA_SuiteEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
TNA_SuiteEnergy.hhrna / RNA_EnergyMethodOptions.fwd.hh
TNA_SuiteEnergy.hhScoreFunction.fwd.hh
TNA_SuiteEnergy.hhrna / TNA_SuitePotential.hh
TNA_SuiteEnergyCreator.hhmethods / EnergyMethod.fwd.hh
TNA_SuiteEnergyCreator.hhmethods / EnergyMethodCreator.hh
TNA_SuiteEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
UnfoldedStateEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
UnfoldedStateEnergy.ccEnergyMap.hh
UnfoldedStateEnergy.ccmethods / EnergyMethodOptions.hh
UnfoldedStateEnergy.ccScoringManager.hh
UnfoldedStateEnergy.ccUnfoldedStatePotential.hh
UnfoldedStateEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
UnfoldedStateEnergy.hhEnergyMap.hh
UnfoldedStateEnergy.hhScoreFunction.fwd.hh
UnfoldedStateEnergy.hhUnfoldedStatePotential.fwd.hh
UnfoldedStateEnergyCreator.hhmethods / EnergyMethod.fwd.hh
UnfoldedStateEnergyCreator.hhmethods / EnergyMethodCreator.hh
UnfoldedStateEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
VdWTinkerEnergy.ccDenseEnergyContainer.hh
VdWTinkerEnergy.ccEnergies.hh
VdWTinkerEnergy.ccmethods / EnergyMethodOptions.hh
VdWTinkerEnergy.ccMinimizationData.hh
VdWTinkerEnergy.ccScoreFunction.hh
VdWTinkerEnergy.ccScoringManager.hh
VdWTinkerEnergy.ccVdWTinkerPotential.hh
VdWTinkerEnergy.hhmethods / ContextIndependentLRTwoBodyEnergy.hh
VdWTinkerEnergy.hhEnergyMap.fwd.hh
VdWTinkerEnergy.hhmethods / EnergyMethodOptions.fwd.hh
VdWTinkerEnergy.hhVdWTinkerPotential.fwd.hh
VdWTinkerEnergyCreator.hhmethods / EnergyMethod.fwd.hh
VdWTinkerEnergyCreator.hhmethods / EnergyMethodCreator.hh
VdWTinkerEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
WaterAdductHBondEnergy.ccEnergies.hh
WaterAdductHBondEnergy.ccEnergiesCacheableDataType.hh
WaterAdductHBondEnergy.cchbonds / HBondSet.hh
WaterAdductHBondEnergy.ccScoringManager.hh
WaterAdductHBondEnergy.ccWaterAdductHBondPotential.hh
WaterAdductHBondEnergy.hhmethods / ContextIndependentTwoBodyEnergy.hh
WaterAdductHBondEnergy.hhhbonds / HBondSet.fwd.hh
WaterAdductHBondEnergy.hhScoreFunction.fwd.hh
WaterAdductHBondEnergy.hhWaterAdductHBondPotential.fwd.hh
WaterAdductHBondEnergyCreator.hhmethods / EnergyMethod.fwd.hh
WaterAdductHBondEnergyCreator.hhmethods / EnergyMethodCreator.hh
WaterAdductHBondEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
WaterAdductIntraEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
WaterAdductIntraEnergy.ccEnergyMap.hh
WaterAdductIntraEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
WaterAdductIntraEnergy.hhScoreFunction.fwd.hh
WaterAdductIntraEnergyCreator.hhmethods / EnergyMethod.fwd.hh
WaterAdductIntraEnergyCreator.hhmethods / EnergyMethodCreator.hh
WaterAdductIntraEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
WaterSpecificEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
WaterSpecificEnergy.ccEnergies.hh
WaterSpecificEnergy.ccEnergiesCacheableDataType.hh
WaterSpecificEnergy.ccEnergyMap.hh
WaterSpecificEnergy.cchbonds / HBEvalTuple.hh
WaterSpecificEnergy.cchbonds / HBondOptions.hh
WaterSpecificEnergy.cchbonds / hbonds.hh
WaterSpecificEnergy.cchbonds / hbonds_geom.hh
WaterSpecificEnergy.cchbonds / HBondSet.hh
WaterSpecificEnergy.ccScoringManager.hh
WaterSpecificEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
WaterSpecificEnergy.hhScoreFunction.fwd.hh
WaterSpecificEnergyCreator.hhmethods / EnergyMethod.fwd.hh
WaterSpecificEnergyCreator.hhmethods / EnergyMethodCreator.hh
WaterSpecificEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
XtalMLEnergy.ccEnergies.hh
XtalMLEnergy.ccEnergyMap.hh
XtalMLEnergy.ccmethods / EnergyMethod.hh
XtalMLEnergy.cccryst / PhenixInterface.hh
XtalMLEnergy.ccScoreFunction.hh
XtalMLEnergy.ccScoreType.hh
XtalMLEnergy.ccmethods / WholeStructureEnergy.hh
XtalMLEnergy.hhEnergyMap.hh
XtalMLEnergy.hhmethods / EnergyMethodOptions.hh
XtalMLEnergy.hhScoreFunction.fwd.hh
XtalMLEnergy.hhScoreType.hh
XtalMLEnergy.hhmethods / WholeStructureEnergy.hh
XtalMLEnergyCreator.hhmethods / EnergyMethodCreator.hh
YHHPlanarityEnergy.ccmethods / ContextIndependentOneBodyEnergy.hh
YHHPlanarityEnergy.ccEnergyMap.hh
YHHPlanarityEnergy.hhmethods / ContextIndependentOneBodyEnergy.hh
YHHPlanarityEnergy.hhMinimizationData.fwd.hh
YHHPlanarityEnergy.hhScoreFunction.fwd.hh
YHHPlanarityEnergyCreator.hhmethods / EnergyMethod.fwd.hh
YHHPlanarityEnergyCreator.hhmethods / EnergyMethodCreator.hh
YHHPlanarityEnergyCreator.hhmethods / EnergyMethodOptions.fwd.hh
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