simple_moves → core Relation

File in src/protocols/simple_moves	Includes file in src/core
AddCavitiesMover.cc	chemical / AA.hh
AddCavitiesMover.cc	pose / datacache / CacheableDataType.hh
AddCavitiesMover.cc	pose / datacache / CacheablePoseRawPtr.hh
AddCavitiesMover.cc	chemical / ChemicalManager.hh
AddCavitiesMover.cc	scoring / packstat / compute_sasa.hh
AddCavitiesMover.cc	scoring / constraints / CoordinateConstraint.hh
AddCavitiesMover.cc	scoring / func / Func.hh
AddCavitiesMover.cc	scoring / func / HarmonicFunc.hh
AddCavitiesMover.cc	pose / Pose.hh
AddCavitiesMover.cc	conformation / Residue.hh
AddCavitiesMover.cc	conformation / ResidueFactory.hh
AddCavitiesMover.cc	chemical / ResidueTypeSet.hh
AddCavitiesMover.cc	scoring / packstat / types.hh
AddCavitiesMover.cc	pose / util.hh
AddCavitiesMover.hh	scoring / packstat / CavityBall.hh
AddCavitiesMover.hh	scoring / packstat / compute_sasa.hh
AddCavitiesMover.hh	conformation / Residue.fwd.hh
AddCavitiesMover.hh	scoring / packstat / types.hh
AddChainMover.cc	conformation / Conformation.hh
AddChainMover.cc	pose / extra_pose_info_util.hh
AddChainMover.cc	kinematics / FoldTree.hh
AddChainMover.cc	import_pose / import_pose.hh
AddChainMover.cc	pose / PDBInfo.hh
AddChainMover.cc	pose / Pose.hh
AddChainMover.cc	scoring / ScoreFunction.hh
AddChainMover.cc	pose / subpose_manipulation_util.hh
AddChainMover.cc	pose / util.hh
AddChainMover.hh	pose / Pose.fwd.hh
AddChainMover.hh	scoring / ScoreFunction.fwd.hh
AddJobPairData.cc	pose / chains_util.hh
AddJobPairData.cc	pose / util.hh
AddPDBInfoMover.cc	id / AtomID.hh
AddPDBInfoMover.cc	pose / PDBInfo.hh
AddPDBInfoMover.cc	pose / Pose.hh
AddPDBInfoMover.cc	scoring / ScoreFunction.hh
AddPDBInfoMover.cc	pose / util.hh
AddPDBInfoMover.hh	pose / Pose.fwd.hh
AddPDBInfoMover.hh	scoring / ScoreFunction.hh
AddPDBInfoMover.hh	types.hh
AddResidueCouplingConstraint.cc	chemical / ChemicalManager.hh
AddResidueCouplingConstraint.cc	scoring / constraints / KofNConstraint.hh
AddResidueCouplingConstraint.cc	pose / Pose.hh
AddResidueCouplingConstraint.cc	scoring / constraints / ResidueCouplingConstraint.hh
AddResidueCouplingConstraint.cc	chemical / ResidueType.hh
AddResidueCouplingConstraint.cc	chemical / ResidueTypeSet.hh
AddResidueCouplingConstraint.cc	scoring / ScoreFunction.hh
AddResidueLabelMover.cc	pose / PDBInfo.hh
AddResidueLabelMover.cc	pose / Pose.hh
AddResidueLabelMover.cc	select / residue_selector / ResidueSelector.hh
AddResidueLabelMover.cc	select / residue_selector / ResidueSelectorFactory.hh
AddResidueLabelMover.cc	conformation / symmetry / SymmetryInfo.hh
AddResidueLabelMover.cc	select / residue_selector / TrueResidueSelector.hh
AddResidueLabelMover.cc	pose / symmetry / util.hh
AddResidueLabelMover.cc	select / residue_selector / util.hh
AddResidueLabelMover.cc	pose / util.hh
AddResidueLabelMover.hh	pose / Pose.fwd.hh
AddResidueLabelMover.hh	select / residue_selector / ResidueSelector.fwd.hh
AddSapConstraintMover.cc	pose / Pose.hh
AddSapConstraintMover.cc	select / residue_selector / ResidueSelector.hh
AddSapConstraintMover.cc	pack / guidance_scoreterms / sap / SapConstraint.hh
AddSapConstraintMover.cc	pack / guidance_scoreterms / sap / SapConstraintOptions.hh
AddSapConstraintMover.cc	select / residue_selector / util.hh
AddSapConstraintMover.hh	pose / Pose.fwd.hh
AddSapConstraintMover.hh	select / residue_selector / ResidueSelector.fwd.hh
AddSapConstraintMover.hh	pack / guidance_scoreterms / sap / SapConstraintOptions.fwd.hh
AddSapMathConstraintMover.cc	pose / Pose.hh
AddSapMathConstraintMover.cc	select / residue_selector / ResidueSelector.hh
AddSapMathConstraintMover.cc	pack / guidance_scoreterms / sap / SapConstraint.hh
AddSapMathConstraintMover.cc	pack / guidance_scoreterms / sap / SapConstraintOptions.hh
AddSapMathConstraintMover.cc	select / residue_selector / util.hh
AddSapMathConstraintMover.hh	pose / Pose.fwd.hh
AddSapMathConstraintMover.hh	pack / guidance_scoreterms / sap / SapMathConstraint.hh
AlignChainMover.cc	conformation / Conformation.hh
AlignChainMover.cc	import_pose / import_pose.hh
AlignChainMover.cc	pose / Pose.hh
AlignChainMover.hh	pose / Pose.fwd.hh
asym_fold_and_dock / AsymFoldandDockMoveRbJumpMover.cc	conformation / Conformation.hh
asym_fold_and_dock / AsymFoldandDockMoveRbJumpMover.cc	kinematics / FoldTree.hh
asym_fold_and_dock / AsymFoldandDockMoveRbJumpMover.cc	pose / Pose.hh
asym_fold_and_dock / AsymFoldandDockMoveRbJumpMover.cc	conformation / Residue.hh
asym_fold_and_dock / AsymFoldandDockMoveRbJumpMover.hh	pose / Pose.fwd.hh
asym_fold_and_dock / AsymFoldandDockRbTrialMover.cc	kinematics / MoveMap.hh
asym_fold_and_dock / AsymFoldandDockRbTrialMover.cc	scoring / ScoreFunction.hh
asym_fold_and_dock / AsymFoldandDockRbTrialMover.cc	scoring / ScoreFunctionFactory.hh
asym_fold_and_dock / AsymFoldandDockRbTrialMover.hh	pose / Pose.fwd.hh
asym_fold_and_dock / AsymFoldandDockRbTrialMover.hh	scoring / ScoreFunction.hh
BackboneMover.cc	id / AtomID.hh
BackboneMover.cc	kinematics / AtomTree.hh
BackboneMover.cc	conformation / Conformation.hh
BackboneMover.cc	id / DOF_ID_Range.hh
BackboneMover.cc	scoring / Energies.hh
BackboneMover.cc	conformation / carbohydrates / GlycanTreeSet.hh
BackboneMover.cc	kinematics / MoveMap.hh
BackboneMover.cc	select / movemap / MoveMapFactory.hh
BackboneMover.cc	pose / Pose.hh
BackboneMover.cc	scoring / Ramachandran.hh
BackboneMover.cc	conformation / Residue.hh
BackboneMover.cc	select / residue_selector / ResidueSelector.hh
BackboneMover.cc	scoring / ScoreFunction.hh
BackboneMover.cc	scoring / ScoringManager.hh
BackboneMover.cc	id / TorsionID_Range.hh
BackboneMover.cc	pose / carbohydrates / util.hh
BackboneMover.cc	pose / symmetry / util.hh
BackboneMover.cc	conformation / carbohydrates / util.hh
BackboneMover.cc	conformation / util.hh
BackboneMover.cc	select / residue_selector / util.hh
BackboneMover.hh	conformation / Conformation.fwd.hh
BackboneMover.hh	id / DOF_ID_Range.fwd.hh
BackboneMover.hh	kinematics / MoveMap.fwd.hh
BackboneMover.hh	select / movemap / MoveMapFactory.fwd.hh
BackboneMover.hh	pose / Pose.fwd.hh
BackboneMover.hh	select / residue_selector / ResidueSelector.fwd.hh
BackboneMover.hh	scoring / ScoreFunction.fwd.hh
BackboneMover.hh	types.hh
BBConRotMover.cc	chemical / AtomType.hh
BBConRotMover.cc	conformation / Conformation.hh
BBConRotMover.cc	pose / Pose.hh
BBConRotMover.cc	conformation / Residue.hh
BBConRotMover.cc	chemical / ResidueType.hh
BBConRotMover.cc	kinematics / Stub.hh
BBConRotMover.hh	kinematics / MoveMap.fwd.hh
BBConRotMover.hh	pose / Pose.fwd.hh
BBConRotMover.hh	conformation / Residue.fwd.hh
BBConRotMover.hh	types.hh
bb_sampler / BBDihedralSampler.hh	pose / Pose.hh
bb_sampler / BBDihedralSampler.hh	id / types.hh
BBDihedralSamplerMover.cc	kinematics / MoveMap.hh
BBDihedralSamplerMover.cc	pose / Pose.hh
BBDihedralSamplerMover.cc	select / residue_selector / ResidueSelector.hh
BBDihedralSamplerMover.cc	select / residue_selector / ReturnResidueSubsetSelector.hh
BBDihedralSamplerMover.cc	id / types.hh
BBDihedralSamplerMover.cc	kinematics / util.hh
BBDihedralSamplerMover.cc	select / residue_selector / util.hh
BBDihedralSamplerMover.hh	pose / Pose.fwd.hh
BBDihedralSamplerMover.hh	select / residue_selector / ResidueSelector.fwd.hh
BBGaussianMover.cc	chemical / AtomType.hh
BBGaussianMover.cc	kinematics / MoveMap.hh
BBGaussianMover.cc	select / movemap / MoveMapFactory.hh
BBGaussianMover.cc	pose / Pose.hh
BBGaussianMover.cc	conformation / Residue.hh
BBGaussianMover.hh	kinematics / MoveMap.fwd.hh
BBGaussianMover.hh	select / movemap / MoveMapFactory.fwd.hh
BBGaussianMover.hh	pose / Pose.fwd.hh
BBGaussianMover.hh	conformation / Residue.fwd.hh
BBGaussianMover.hh	types.hh
ChainSplitMover.cc	conformation / Conformation.hh
ChainSplitMover.cc	kinematics / FoldTree.hh
ChainSplitMover.cc	pose / Pose.hh
ChainSplitMover.cc	pose / variant_util.hh
ChainSplitMover.hh	pose / Pose.hh
ChainSplitMover.hh	types.hh
ChangeAndResetFoldTreeMover.cc	kinematics / FoldTree.hh
ChangeAndResetFoldTreeMover.cc	scoring / ScoreFunction.hh
ChangeAndResetFoldTreeMover.hh	pose / Pose.hh
ChangeAndResetFoldTreeMover.hh	scoring / ScoreFunction.fwd.hh
chiral / ChiralMover.cc	id / AtomID.hh
chiral / ChiralMover.cc	scoring / constraints / AtomPairConstraint.hh
chiral / ChiralMover.cc	chemical / AtomType.hh
chiral / ChiralMover.cc	chemical / ChemicalManager.hh
chiral / ChiralMover.cc	conformation / Conformation.hh
chiral / ChiralMover.cc	scoring / constraints / ConstraintSet.hh
chiral / ChiralMover.cc	chemical / Patch.hh
chiral / ChiralMover.cc	pose / Pose.hh
chiral / ChiralMover.cc	conformation / Residue.functions.hh
chiral / ChiralMover.cc	conformation / Residue.hh
chiral / ChiralMover.cc	chemical / ResidueType.hh
chiral / ChiralMover.cc	chemical / ResidueTypeSet.hh
chiral / ChiralMover.cc	pose / util.hh
chiral / ChiralMover.cc	conformation / util.hh
chiral / ChiralMover.cc	chemical / VariantType.hh
chiral / ChiralMover.hh	pose / Pose.fwd.hh
chiral / ChiralMover.hh	chemical / ResidueType.fwd.hh
chiral / ChiralMover.hh	chemical / ResidueTypeSet.fwd.hh
CombinePoseMover.cc	id / AtomID.hh
CombinePoseMover.cc	optimization / AtomTreeMinimizer.hh
CombinePoseMover.cc	optimization / MinimizerOptions.hh
CombinePoseMover.cc	kinematics / MoveMap.hh
CombinePoseMover.cc	pose / Pose.hh
CombinePoseMover.cc	conformation / Residue.hh
CombinePoseMover.cc	chemical / ResidueType.hh
CombinePoseMover.cc	scoring / rms_util.hh
CombinePoseMover.cc	scoring / ScoreFunction.fwd.hh
CombinePoseMover.cc	scoring / ScoreFunction.hh
CombinePoseMover.cc	scoring / ScoreFunctionFactory.hh
CombinePoseMover.cc	io / silent / SilentFileOptions.hh
CombinePoseMover.cc	io / silent / SilentStruct.fwd.hh
CombinePoseMover.cc	io / silent / SilentStruct.hh
CombinePoseMover.cc	io / silent / SilentStructFactory.hh
CombinePoseMover.hh	pose / Pose.hh
CombinePoseMover.hh	scoring / ScoreFunction.fwd.hh
CombinePoseMover.hh	io / silent / SilentStruct.hh
ConcatenatePosesMover.cc	pose / annotated_sequence.hh
ConcatenatePosesMover.cc	conformation / Atom.hh
ConcatenatePosesMover.cc	chemical / ChemicalManager.hh
ConcatenatePosesMover.cc	import_pose / import_pose.hh
ConcatenatePosesMover.cc	pose / Pose.hh
ConcatenatePosesMover.cc	conformation / Residue.hh
ConcatenatePosesMover.cc	chemical / ResidueType.hh
ConcatenatePosesMover.cc	chemical / ResidueTypeSet.hh
ConcatenatePosesMover.cc	pose / subpose_manipulation_util.hh
ConcatenatePosesMover.cc	pose / util.hh
ConcatenatePosesMover.cc	pose / variant_util.hh
ConcatenatePosesMover.hh	pose / Pose.fwd.hh
ConstrainToIdealMover.cc	scoring / constraints / AngleConstraint.hh
ConstrainToIdealMover.cc	pose / annotated_sequence.hh
ConstrainToIdealMover.cc	kinematics / tree / Atom.hh
ConstrainToIdealMover.cc	pose / toolbox / AtomLevelDomainMap.hh
ConstrainToIdealMover.cc	scoring / constraints / AtomPairConstraint.hh
ConstrainToIdealMover.cc	kinematics / AtomTree.hh
ConstrainToIdealMover.cc	chemical / AtomType.hh
ConstrainToIdealMover.cc	chemical / ChemicalManager.hh
ConstrainToIdealMover.cc	scoring / func / CircularHarmonicFunc.hh
ConstrainToIdealMover.cc	conformation / Conformation.hh
ConstrainToIdealMover.cc	scoring / constraints / ConstraintSet.hh
ConstrainToIdealMover.cc	scoring / constraints / DihedralConstraint.hh
ConstrainToIdealMover.cc	scoring / func / HarmonicFunc.hh
ConstrainToIdealMover.cc	kinematics / MoveMap.hh
ConstrainToIdealMover.cc	pose / Pose.hh
ConstrainToIdealMover.cc	conformation / Residue.hh
ConstrainToIdealMover.cc	chemical / rna / RNA_FittedTorsionInfo.hh
ConstrainToIdealMover.cc	pose / rna / util.hh
ConstrainToIdealMover.cc	chemical / rna / util.hh
ConstrainToIdealMover.cc	pose / util.hh
ConstrainToIdealMover.hh	id / AtomID.fwd.hh
ConstrainToIdealMover.hh	pose / toolbox / AtomLevelDomainMap.fwd.hh
ConstrainToIdealMover.hh	scoring / constraints / ConstraintSet.fwd.hh
ConstrainToIdealMover.hh	kinematics / MoveMap.fwd.hh
ConstrainToIdealMover.hh	pose / Pose.fwd.hh
ConstrainToIdealMover.hh	conformation / Residue.fwd.hh
ConstrainToIdealMover.hh	scoring / ScoreType.hh
ContingentAcceptMover.cc	kinematics / FoldTree.hh
ContingentAcceptMover.cc	pose / Pose.hh
ContingentAcceptMover.cc	pose / util.hh
ContingentAcceptMover.hh	pose / Pose.fwd.hh
ConvertRealToVirtualMover.cc	pose / Pose.hh
ConvertRealToVirtualMover.cc	select / residue_selector / ResidueSelector.hh
ConvertRealToVirtualMover.cc	chemical / ResidueType.hh
ConvertRealToVirtualMover.hh	pose / Pose.fwd.hh
ConvertRealToVirtualMover.hh	select / residue_selector / ResidueSelector.fwd.hh
ConvertVirtualToRealMover.cc	pose / Pose.hh
ConvertVirtualToRealMover.cc	select / residue_selector / ResidueSelector.hh
ConvertVirtualToRealMover.cc	chemical / ResidueType.hh
ConvertVirtualToRealMover.hh	pose / Pose.fwd.hh
ConvertVirtualToRealMover.hh	select / residue_selector / ResidueSelector.fwd.hh
CopyDofMover.cc	id / AtomID.hh
CopyDofMover.cc	pose / copydofs / CopyDofs.hh
CopyDofMover.cc	kinematics / FoldTree.hh
CopyDofMover.cc	pose / Pose.hh
CopyDofMover.cc	conformation / Residue.hh
CopyDofMover.cc	chemical / ResidueType.hh
CopyDofMover.cc	pose / copydofs / util.hh
CopyDofMover.hh	pose / copydofs / CopyDofs.fwd.hh
CopyDofMover.hh	pose / copydofs / CopyDofsInfo.fwd.hh
CopyDofMover.hh	pose / MiniPose.hh
CopyDofMover.hh	pose / Pose.fwd.hh
CopyDofMover.hh	types.hh
CopyRotamerMover.cc	pose / Pose.hh
CopyRotamerMover.cc	chemical / ResidueType.hh
CopyRotamerMover.hh	pose / Pose.fwd.hh
CoupledMover.cc	pack / task / residue_selector / ClashBasedShellSelector.hh
CoupledMover.cc	kinematics / FoldTree.hh
CoupledMover.cc	select / residue_selector / NeighborhoodResidueSelector.hh
CoupledMover.cc	pack / task / operation / OperateOnResidueSubset.hh
CoupledMover.cc	pack / task / PackerTask.hh
CoupledMover.cc	pack / task / PackerTask_.hh
CoupledMover.cc	pose / Pose.hh
CoupledMover.cc	conformation / Residue.hh
CoupledMover.cc	pack / task / operation / ResLvlTaskOperations.hh
CoupledMover.cc	pack / rotamer_set / RotamerLinks.hh
CoupledMover.cc	scoring / ScoreFunction.hh
CoupledMover.cc	pack / task / TaskFactory.hh
CoupledMover.cc	pack / task / operation / TaskOperations.hh
CoupledMover.hh	pack / task / PackerTask.hh
CoupledMover.hh	pose / Pose.fwd.hh
CoupledMover.hh	scoring / ScoreFunction.hh
CoupledMover.hh	types.hh
CutChainMover.cc	pose / datacache / CacheableDataType.hh
CutChainMover.cc	pose / datacache / CacheableObserverType.hh
CutChainMover.cc	conformation / Conformation.hh
CutChainMover.cc	scoring / Energies.hh
CutChainMover.cc	kinematics / FoldTree.hh
CutChainMover.cc	pose / datacache / ObserverCache.hh
CutChainMover.cc	pack / task / PackerTask.hh
CutChainMover.cc	pose / PDBInfo.hh
CutChainMover.cc	pose / Pose.hh
CutChainMover.cc	conformation / Residue.hh
CutChainMover.cc	chemical / ResidueType.hh
CutChainMover.cc	scoring / ScoreFunction.hh
CutChainMover.cc	pose / selection.hh
CutChainMover.cc	pack / task / TaskFactory.hh
CutChainMover.cc	pack / task / operation / TaskOperations.hh
CutChainMover.cc	id / TorsionID.hh
CutChainMover.cc	id / types.hh
CutChainMover.cc	types.hh
CutChainMover.cc	pose / carbohydrates / util.hh
CutChainMover.cc	pose / util.hh
CutChainMover.hh	pose / Pose.fwd.hh
CyclizationMover.cc	scoring / constraints / AngleConstraint.hh
CyclizationMover.cc	id / AtomID.hh
CyclizationMover.cc	scoring / constraints / AtomPairConstraint.hh
CyclizationMover.cc	scoring / func / CharmmPeriodicFunc.hh
CyclizationMover.cc	chemical / ChemicalManager.hh
CyclizationMover.cc	scoring / func / CircularHarmonicFunc.hh
CyclizationMover.cc	conformation / Conformation.hh
CyclizationMover.cc	scoring / constraints / Constraint.hh
CyclizationMover.cc	scoring / constraints / DihedralConstraint.hh
CyclizationMover.cc	scoring / func / HarmonicFunc.hh
CyclizationMover.cc	kinematics / MoveMap.hh
CyclizationMover.cc	pose / Pose.hh
CyclizationMover.cc	chemical / ResidueConnection.hh
CyclizationMover.cc	chemical / ResidueType.hh
CyclizationMover.cc	chemical / ResidueTypeSet.hh
CyclizationMover.cc	scoring / ScoreFunction.hh
CyclizationMover.cc	scoring / ScoreFunctionFactory.hh
CyclizationMover.cc	scoring / ScoringManager.hh
CyclizationMover.cc	id / TorsionID.hh
CyclizationMover.cc	types.hh
CyclizationMover.cc	pose / util.hh
CyclizationMover.hh	scoring / mm / MMTorsionLibrary.hh
CyclizationMover.hh	kinematics / MoveMap.hh
CyclizationMover.hh	pose / Pose.fwd.hh
CyclizationMover.hh	scoring / ScoreFunction.hh
DeleteChainMover.cc	pose / Pose.hh
DeleteChainMover.cc	pose / util.hh
DeleteChainMover.hh	pose / Pose.fwd.hh
DeleteChainsMover.cc	pose / chains_util.hh
DeleteChainsMover.cc	conformation / Conformation.hh
DeleteChainsMover.cc	pose / PDBInfo.hh
DeleteChainsMover.cc	pose / Pose.hh
DeleteChainsMover.cc	pose / util.hh
DeleteChainsMover.hh	pose / Pose.fwd.hh
DisulfideInsertionMover.cc	scoring / constraints / AngleConstraint.hh
DisulfideInsertionMover.cc	scoring / constraints / AtomPairConstraint.hh
DisulfideInsertionMover.cc	io / pdb / build_pose_as_is.hh
DisulfideInsertionMover.cc	chemical / ChemicalManager.hh
DisulfideInsertionMover.cc	conformation / Conformation.hh
DisulfideInsertionMover.cc	scoring / constraints / ConstraintSet.hh
DisulfideInsertionMover.cc	scoring / constraints / CoordinateConstraint.hh
DisulfideInsertionMover.cc	scoring / constraints / DihedralConstraint.hh
DisulfideInsertionMover.cc	util / disulfide_util.hh
DisulfideInsertionMover.cc	scoring / disulfides / DisulfideMatchingPotential.hh
DisulfideInsertionMover.cc	scoring / Energies.hh
DisulfideInsertionMover.cc	scoring / func / HarmonicFunc.hh
DisulfideInsertionMover.cc	kinematics / MoveMap.hh
DisulfideInsertionMover.cc	select / movemap / MoveMapFactory.hh
DisulfideInsertionMover.cc	io / pdb / pdb_writer.hh
DisulfideInsertionMover.cc	pose / Pose.hh
DisulfideInsertionMover.cc	conformation / Residue.hh
DisulfideInsertionMover.cc	conformation / ResidueFactory.hh
DisulfideInsertionMover.cc	scoring / ScoreFunction.hh
DisulfideInsertionMover.cc	scoring / ScoreFunctionFactory.hh
DisulfideInsertionMover.cc	scoring / ScoreType.hh
DisulfideInsertionMover.cc	types.hh
DisulfideInsertionMover.cc	pose / util.hh
DisulfideInsertionMover.cc	conformation / util.hh
DisulfideInsertionMover.hh	select / movemap / MoveMapFactory.fwd.hh
DisulfideInsertionMover.hh	pose / Pose.fwd.hh
DisulfideInsertionMover.hh	scoring / ScoreFunction.hh
DME_FilterMover.cc	conformation / find_neighbors.hh
DME_FilterMover.cc	conformation / PointGraph.hh
DME_FilterMover.cc	conformation / PointGraphData.hh
DME_FilterMover.cc	pose / Pose.hh
DME_FilterMover.cc	conformation / Residue.hh
DME_FilterMover.hh	pose / Pose.fwd.hh
DME_FilterMover.hh	types.hh
DOFHistogramRecorder.cc	kinematics / tree / Atom.hh
DOFHistogramRecorder.cc	kinematics / AtomTree.hh
DOFHistogramRecorder.cc	id / DOF_ID_Range.hh
DOFHistogramRecorder.cc	pose / Pose.hh
DOFHistogramRecorder.cc	chemical / ResidueType.hh
DOFHistogramRecorder.hh	id / DOF_ID.fwd.hh
DOFHistogramRecorder.hh	id / DOF_ID_Range.fwd.hh
DOFHistogramRecorder.hh	pose / Pose.fwd.hh
DOFHistogramRecorder.hh	id / types.hh
DOFHistogramRecorder.hh	types.hh
DumpPdb.cc	id / AtomID.hh
DumpPdb.cc	pose / PDBInfo.hh
DumpPdb.cc	pose / Pose.hh
DumpPdb.cc	scoring / ScoreFunction.hh
DumpPdb.cc	pose / util.hh
DumpPdb.hh	pose / Pose.fwd.hh
DumpPdb.hh	scoring / ScoreFunction.hh
DumpPdb.hh	types.hh
DumpSingleResidueRotamers.cc	pack / dunbrack / DunbrackRotamer.hh
DumpSingleResidueRotamers.cc	scoring / Energies.hh
DumpSingleResidueRotamers.cc	scoring / EnergyGraph.hh
DumpSingleResidueRotamers.cc	scoring / EnergyMap.hh
DumpSingleResidueRotamers.cc	pose / PDBInfo.hh
DumpSingleResidueRotamers.cc	pose / Pose.hh
DumpSingleResidueRotamers.cc	conformation / Residue.hh
DumpSingleResidueRotamers.cc	chemical / ResidueType.hh
DumpSingleResidueRotamers.cc	pack / dunbrack / RotamerLibrary.hh
DumpSingleResidueRotamers.cc	scoring / ScoreFunction.hh
DumpSingleResidueRotamers.cc	scoring / ScoreFunctionFactory.hh
DumpSingleResidueRotamers.cc	pack / dunbrack / SingleResidueDunbrackLibrary.hh
DumpSingleResidueRotamers.cc	pack / rotamers / SingleResidueRotamerLibrary.hh
DumpSingleResidueRotamers.cc	pack / rotamers / SingleResidueRotamerLibraryFactory.hh
DumpSingleResidueRotamers.cc	pack / task / TaskFactory.hh
DumpSingleResidueRotamers.cc	pack / task / operation / TaskOperations.hh
DumpSingleResidueRotamers.cc	types.hh
DumpSingleResidueRotamers.hh	pose / Pose.fwd.hh
DumpSingleResidueRotamers.hh	pack / dunbrack / SingleResidueDunbrackLibrary.hh
DumpSingleResidueRotamers.hh	types.hh
ExplicitWaterMover.cc	pack / interaction_graph / AnnealableGraphBase.hh
ExplicitWaterMover.cc	pose / chains_util.hh
ExplicitWaterMover.cc	chemical / ChemicalManager.hh
ExplicitWaterMover.cc	conformation / Conformation.hh
ExplicitWaterMover.cc	pack / annealer / FixbbPwatSimAnnealer.hh
ExplicitWaterMover.cc	import_pose / import_pose.hh
ExplicitWaterMover.cc	import_pose / import_pose_options.hh
ExplicitWaterMover.cc	pack / interaction_graph / InteractionGraphFactory.hh
ExplicitWaterMover.cc	scoring / lkball / LK_BallInfo.hh
ExplicitWaterMover.cc	pack / pack_rotamers.hh
ExplicitWaterMover.cc	pack / packer_neighbors.hh
ExplicitWaterMover.cc	pack / task / PackerTask.hh
ExplicitWaterMover.cc	pack / task / PackerTask_.hh
ExplicitWaterMover.cc	pose / PDBInfo.hh
ExplicitWaterMover.cc	pose / Pose.hh
ExplicitWaterMover.cc	conformation / Residue.hh
ExplicitWaterMover.cc	conformation / ResidueFactory.hh
ExplicitWaterMover.cc	scoring / constraints / ResidueTypeConstraint.hh
ExplicitWaterMover.cc	chemical / ResidueTypeSet.hh
ExplicitWaterMover.cc	pack / rotamer_set / RotamerSet.hh
ExplicitWaterMover.cc	pack / rotamer_set / RotamerSet_.hh
ExplicitWaterMover.cc	pack / rotamer_set / RotamerSetFactory.hh
ExplicitWaterMover.cc	pack / rotamer_set / RotamerSets.hh
ExplicitWaterMover.cc	scoring / ScoreFunction.hh
ExplicitWaterMover.cc	scoring / ScoreType.hh
ExplicitWaterMover.cc	scoring / sc / ShapeComplementarityCalculator.hh
ExplicitWaterMover.cc	scoring / sc / ShapeComplementarityCalculator_Private.hh
ExplicitWaterMover.cc	conformation / symmetry / SymmetricConformation.fwd.hh
ExplicitWaterMover.cc	conformation / symmetry / SymmetricConformation.hh
ExplicitWaterMover.cc	pack / rotamer_set / symmetry / SymmetricRotamerSets.hh
ExplicitWaterMover.cc	conformation / symmetry / SymmetryInfo.hh
ExplicitWaterMover.cc	pack / task / TaskFactory.hh
ExplicitWaterMover.cc	pose / symmetry / util.hh
ExplicitWaterMover.cc	pack / task / xml_util.hh
ExplicitWaterMover.hh	pack / interaction_graph / AnnealableGraphBase.fwd.hh
ExplicitWaterMover.hh	pack / annealer / FixbbPwatSimAnnealer.fwd.hh
ExplicitWaterMover.hh	pack / task / PackerTask.fwd.hh
ExplicitWaterMover.hh	pose / Pose.fwd.hh
ExplicitWaterMover.hh	pack / rotamer_set / RotamerSets.fwd.hh
ExplicitWaterMover.hh	scoring / ScoreFunction.fwd.hh
ExplicitWaterMover.hh	pack / task / TaskFactory.fwd.hh
ExplicitWaterMover.hh	types.hh
FavorSequenceProfile.cc	conformation / Conformation.hh
FavorSequenceProfile.cc	import_pose / import_pose.hh
FavorSequenceProfile.cc	pose / Pose.hh
FavorSequenceProfile.cc	pose / ref_pose.hh
FavorSequenceProfile.cc	scoring / ScoreFunction.hh
FavorSequenceProfile.cc	pose / selection.hh
FavorSequenceProfile.cc	sequence / Sequence.hh
FavorSequenceProfile.cc	id / SequenceMapping.hh
FavorSequenceProfile.cc	sequence / SequenceProfile.hh
FavorSequenceProfile.cc	scoring / constraints / SequenceProfileConstraint.hh
FavorSequenceProfile.cc	sequence / util.hh
FavorSequenceProfile.hh	pose / Pose.fwd.hh
FavorSequenceProfile.hh	sequence / Sequence.fwd.hh
FavorSequenceProfile.hh	sequence / SequenceProfile.hh
FavorSequenceProfile.hh	types.hh
FavorSymmetricSequence.cc	pose / Pose.hh
FavorSymmetricSequence.cc	scoring / constraints / ResidueTypeLinkingConstraint.hh
FavorSymmetricSequence.cc	scoring / ScoreFunction.hh
FoldTreeFromMotif.cc	conformation / Conformation.hh
FoldTreeFromMotif.cc	kinematics / FoldTree.hh
FoldTreeFromMotif.cc	pose / Pose.hh
FoldTreeFromMotif.cc	select / util.hh
FoldTreeFromMotif.hh	pose / Pose.fwd.hh
FoldTreeFromMotif.hh	select / residue_selector / ResidueSelector.fwd.hh
FoldTreeFromMotif.hh	select / residue_selector / ResidueSelector.hh
FragmentMover.cc	fragment / ConstantLengthFragSet.hh
FragmentMover.cc	kinematics / FoldTree.hh
FragmentMover.cc	fragment / FragSet.hh
FragmentMover.cc	fragment / Frame.hh
FragmentMover.cc	kinematics / MoveMap.hh
FragmentMover.cc	pose / Pose.hh
FragmentMover.cc	conformation / symmetry / SymmetryInfo.hh
FragmentMover.cc	pose / symmetry / util.hh
FragmentMover.hh	fragment / ConstantLengthFragSet.fwd.hh
FragmentMover.hh	fragment / FragSet.fwd.hh
FragmentMover.hh	fragment / Frame.fwd.hh
FragmentMover.hh	fragment / FrameList.fwd.hh
FragmentMover.hh	kinematics / MoveMap.fwd.hh
FragmentMover.hh	pose / Pose.fwd.hh
GunnCost.cc	id / AtomID.hh
GunnCost.cc	chemical / ChemicalManager.hh
GunnCost.cc	fragment / FragData.hh
GunnCost.cc	pose / Pose.hh
GunnCost.cc	chemical / ResidueType.hh
GunnCost.cc	scoring / ScoreFunction.fwd.hh
GunnCost.cc	types.hh
GunnCost.hh	fragment / FragCache.hh
GunnCost.hh	fragment / Frame.fwd.hh
GunnCost.hh	pose / Pose.fwd.hh
GunnCost.hh	types.hh
bin_transitions / InitializeByBins.cc	chemical / AA.hh
bin_transitions / InitializeByBins.cc	scoring / bin_transitions / BinTransitionCalculator.hh
bin_transitions / InitializeByBins.cc	scoring / bin_transitions / BinTransitionData.hh
bin_transitions / InitializeByBins.cc	conformation / Conformation.hh
bin_transitions / InitializeByBins.cc	pose / Pose.hh
bin_transitions / InitializeByBins.cc	conformation / Residue.hh
bin_transitions / InitializeByBins.cc	id / TorsionID.hh
bin_transitions / InitializeByBins.cc	id / types.hh
bin_transitions / InitializeByBins.cc	types.hh
bin_transitions / InitializeByBins.hh	scoring / bin_transitions / BinTransitionCalculator.fwd.hh
bin_transitions / InitializeByBins.hh	scoring / bin_transitions / BinTransitionData.fwd.hh
bin_transitions / InitializeByBins.hh	pose / Pose.fwd.hh
bin_transitions / InitializeByBins.hh	types.hh
sidechain_moves / JumpRotamerSidechainMover.cc	conformation / Conformation.hh
sidechain_moves / JumpRotamerSidechainMover.cc	id / DOF_ID_Range.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pack / task / PackerTask.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pose / Pose.hh
sidechain_moves / JumpRotamerSidechainMover.cc	conformation / Residue.hh
sidechain_moves / JumpRotamerSidechainMover.cc	conformation / ResidueFactory.hh
sidechain_moves / JumpRotamerSidechainMover.cc	chemical / ResidueType.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pack / dunbrack / RotamerLibraryScratchSpace.hh
sidechain_moves / JumpRotamerSidechainMover.cc	scoring / ScoringManager.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pack / dunbrack / SingleResidueDunbrackLibrary.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pack / task / TaskFactory.hh
sidechain_moves / JumpRotamerSidechainMover.cc	pack / task / operation / TaskOperations.hh
sidechain_moves / JumpRotamerSidechainMover.cc	id / TorsionID.hh
sidechain_moves / JumpRotamerSidechainMover.cc	types.hh
sidechain_moves / JumpRotamerSidechainMover.hh	id / DOF_ID_Range.fwd.hh
sidechain_moves / JumpRotamerSidechainMover.hh	pack / dunbrack / DunbrackRotamer.fwd.hh
sidechain_moves / JumpRotamerSidechainMover.hh	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / JumpRotamerSidechainMover.hh	pack / task / PackerTask.fwd.hh
sidechain_moves / JumpRotamerSidechainMover.hh	pose / Pose.fwd.hh
sidechain_moves / JumpRotamerSidechainMover.hh	chemical / ResidueType.fwd.hh
sidechain_moves / JumpRotamerSidechainMover.hh	pack / dunbrack / RotamerLibrary.fwd.hh
sidechain_moves / JumpRotamerSidechainMover.hh	pack / task / TaskFactory.fwd.hh
LoadUnboundRotMover.cc	pose / Pose.hh
LoadUnboundRotMover.cc	pack / dunbrack / RotamerConstraint.hh
LoadUnboundRotMover.hh	pose / Pose.fwd.hh
MembraneTopology.cc	pose / datacache / CacheableDataType.hh
MembraneTopology.cc	scoring / MembraneTopology.hh
MembraneTopology.cc	pose / Pose.hh
MembraneTopology.hh	pose / Pose.fwd.hh
MembraneTopology.hh	types.hh
MissingDensityToJumpMover.cc	chemical / AA.hh
MissingDensityToJumpMover.cc	kinematics / FoldTree.hh
MissingDensityToJumpMover.cc	pose / Pose.hh
MissingDensityToJumpMover.cc	conformation / Residue.hh
MissingDensityToJumpMover.cc	chemical / ResidueType.hh
MissingDensityToJumpMover.cc	types.hh
MissingDensityToJumpMover.cc	pose / variant_util.hh
MissingDensityToJumpMover.cc	chemical / VariantType.hh
MissingDensityToJumpMover.hh	pose / Pose.fwd.hh
MissingDensityToJumpMover.hh	types.hh
ModifyVariantTypeMover.cc	chemical / AtomType.hh
ModifyVariantTypeMover.cc	pose / Pose.hh
ModifyVariantTypeMover.cc	conformation / Residue.hh
ModifyVariantTypeMover.cc	chemical / ResidueProperties.hh
ModifyVariantTypeMover.cc	select / residue_selector / ResidueSelector.hh
ModifyVariantTypeMover.cc	chemical / ResidueTypeSet.hh
ModifyVariantTypeMover.cc	select / residue_selector / util.hh
ModifyVariantTypeMover.cc	pose / util.hh
ModifyVariantTypeMover.cc	chemical / VariantType.hh
ModifyVariantTypeMover.hh	pose / Pose.fwd.hh
ModifyVariantTypeMover.hh	select / residue_selector / ResidueSelector.fwd.hh
MutateResidue.cc	chemical / AA.hh
MutateResidue.cc	conformation / Conformation.hh
MutateResidue.cc	kinematics / Jump.hh
MutateResidue.cc	pose / Pose.hh
MutateResidue.cc	conformation / Residue.hh
MutateResidue.cc	conformation / ResidueFactory.hh
MutateResidue.cc	select / residue_selector / ResidueSelector.hh
MutateResidue.cc	chemical / ResidueTypeSet.hh
MutateResidue.cc	pose / selection.hh
MutateResidue.cc	types.hh
MutateResidue.cc	pose / util.hh
MutateResidue.cc	select / residue_selector / util.hh
MutateResidue.cc	conformation / util.hh
MutateResidue.hh	chemical / AA.hh
MutateResidue.hh	pose / Pose.fwd.hh
MutateResidue.hh	select / residue_selector / ResidueSelector.hh
MutateResidue.hh	types.hh
PDBReloadMover.cc	import_pose / import_pose.hh
PDBReloadMover.cc	id / types.hh
PDBReloadMover.cc	types.hh
PDBReloadMover.cc	pose / util.hh
PDBReloadMover.hh	pose / Pose.hh
PeriodicBoxMover.cc	chemical / AtomType.hh
PeriodicBoxMover.cc	optimization / CartesianMinimizerMap.hh
PeriodicBoxMover.cc	optimization / CartesianMultifunc.hh
PeriodicBoxMover.cc	conformation / Conformation.hh
PeriodicBoxMover.cc	io / CrystInfo.hh
PeriodicBoxMover.cc	kinematics / DomainMap.fwd.hh
PeriodicBoxMover.cc	scoring / Energies.fwd.hh
PeriodicBoxMover.cc	scoring / Energies.hh
PeriodicBoxMover.cc	scoring / EnergyGraph.fwd.hh
PeriodicBoxMover.cc	scoring / EnergyGraph.hh
PeriodicBoxMover.cc	kinematics / FoldTree.hh
PeriodicBoxMover.cc	scoring / hbonds / hbonds.hh
PeriodicBoxMover.cc	scoring / hbonds / hbonds_geom.hh
PeriodicBoxMover.cc	scoring / hbonds / HBondSet.hh
PeriodicBoxMover.cc	import_pose / import_pose.hh
PeriodicBoxMover.cc	kinematics / MoveMap.hh
PeriodicBoxMover.cc	pack / packer_neighbors.hh
PeriodicBoxMover.cc	pack / task / PackerTask.hh
PeriodicBoxMover.cc	pose / PDBInfo.hh
PeriodicBoxMover.cc	pose / Pose.hh
PeriodicBoxMover.cc	conformation / Residue.hh
PeriodicBoxMover.cc	conformation / ResidueFactory.hh
PeriodicBoxMover.cc	scoring / constraints / ResidueTypeConstraint.hh
PeriodicBoxMover.cc	chemical / ResidueTypeSet.hh
PeriodicBoxMover.cc	scoring / ScoreFunction.hh
PeriodicBoxMover.cc	scoring / ScoreFunctionFactory.hh
PeriodicBoxMover.cc	scoring / sc / ShapeComplementarityCalculator.hh
PeriodicBoxMover.cc	scoring / sc / ShapeComplementarityCalculator_Private.hh
PeriodicBoxMover.cc	io / silent / SilentFileData.hh
PeriodicBoxMover.cc	io / silent / SilentFileOptions.hh
PeriodicBoxMover.cc	io / silent / SilentStruct.hh
PeriodicBoxMover.cc	io / silent / SilentStructFactory.hh
PeriodicBoxMover.cc	conformation / symmetry / SymmetricConformation.fwd.hh
PeriodicBoxMover.cc	conformation / symmetry / SymmetricConformation.hh
PeriodicBoxMover.cc	conformation / symmetry / SymmetryInfo.hh
PeriodicBoxMover.cc	pack / task / TaskFactory.hh
PeriodicBoxMover.cc	optimization / types.hh
PeriodicBoxMover.cc	pose / util.hh
PeriodicBoxMover.cc	pose / symmetry / util.hh
PeriodicBoxMover.hh	chemical / ChemicalManager.hh
PeriodicBoxMover.hh	conformation / Conformation.hh
PeriodicBoxMover.hh	pack / task / PackerTask.fwd.hh
PeriodicBoxMover.hh	pose / Pose.fwd.hh
PeriodicBoxMover.hh	conformation / Residue.hh
PeriodicBoxMover.hh	conformation / ResidueFactory.hh
PeriodicBoxMover.hh	chemical / ResidueTypeSet.hh
PeriodicBoxMover.hh	scoring / ScoreFunction.hh
PeriodicBoxMover.hh	io / silent / SilentStruct.hh
PeriodicBoxMover.hh	conformation / symmetry / SymmetryInfo.hh
PeriodicBoxMover.hh	pack / task / TaskFactory.fwd.hh
PeriodicBoxMover.hh	types.hh
bin_transitions / PerturbByBins.cc	chemical / AA.hh
bin_transitions / PerturbByBins.cc	scoring / bin_transitions / BinTransitionCalculator.hh
bin_transitions / PerturbByBins.cc	scoring / bin_transitions / BinTransitionData.hh
bin_transitions / PerturbByBins.cc	conformation / Conformation.hh
bin_transitions / PerturbByBins.cc	pose / Pose.hh
bin_transitions / PerturbByBins.cc	conformation / Residue.hh
bin_transitions / PerturbByBins.cc	id / TorsionID.hh
bin_transitions / PerturbByBins.cc	id / types.hh
bin_transitions / PerturbByBins.cc	types.hh
bin_transitions / PerturbByBins.hh	scoring / bin_transitions / BinTransitionCalculator.fwd.hh
bin_transitions / PerturbByBins.hh	scoring / bin_transitions / BinTransitionData.fwd.hh
bin_transitions / PerturbByBins.hh	pose / Pose.fwd.hh
bin_transitions / PerturbByBins.hh	types.hh
sidechain_moves / PerturbChiSidechainMover.cc	conformation / Conformation.hh
sidechain_moves / PerturbChiSidechainMover.cc	id / DOF_ID_Range.hh
sidechain_moves / PerturbChiSidechainMover.cc	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / PerturbChiSidechainMover.cc	pack / task / PackerTask.hh
sidechain_moves / PerturbChiSidechainMover.cc	pose / Pose.hh
sidechain_moves / PerturbChiSidechainMover.cc	conformation / Residue.hh
sidechain_moves / PerturbChiSidechainMover.cc	conformation / ResidueFactory.hh
sidechain_moves / PerturbChiSidechainMover.cc	chemical / ResidueType.hh
sidechain_moves / PerturbChiSidechainMover.cc	pack / dunbrack / RotamerLibraryScratchSpace.hh
sidechain_moves / PerturbChiSidechainMover.cc	scoring / ScoringManager.hh
sidechain_moves / PerturbChiSidechainMover.cc	pack / dunbrack / SingleResidueDunbrackLibrary.hh
sidechain_moves / PerturbChiSidechainMover.cc	pack / task / TaskFactory.hh
sidechain_moves / PerturbChiSidechainMover.cc	pack / task / operation / TaskOperations.hh
sidechain_moves / PerturbChiSidechainMover.cc	id / TorsionID.hh
sidechain_moves / PerturbChiSidechainMover.cc	types.hh
sidechain_moves / PerturbChiSidechainMover.hh	id / DOF_ID_Range.fwd.hh
sidechain_moves / PerturbChiSidechainMover.hh	pack / dunbrack / DunbrackRotamer.fwd.hh
sidechain_moves / PerturbChiSidechainMover.hh	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / PerturbChiSidechainMover.hh	pack / task / PackerTask.fwd.hh
sidechain_moves / PerturbChiSidechainMover.hh	pose / Pose.fwd.hh
sidechain_moves / PerturbChiSidechainMover.hh	chemical / ResidueType.fwd.hh
sidechain_moves / PerturbChiSidechainMover.hh	pack / dunbrack / RotamerLibrary.fwd.hh
sidechain_moves / PerturbChiSidechainMover.hh	pack / task / TaskFactory.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	conformation / Conformation.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	id / DOF_ID_Range.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / task / PackerTask.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pose / Pose.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	conformation / Residue.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	conformation / ResidueFactory.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	chemical / ResidueType.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / dunbrack / RotamerLibraryScratchSpace.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	scoring / ScoringManager.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / dunbrack / SingleResidueDunbrackLibrary.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / rotamers / SingleResidueRotamerLibraryFactory.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / task / TaskFactory.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	pack / task / operation / TaskOperations.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	id / TorsionID.hh
sidechain_moves / PerturbRotamerSidechainMover.cc	types.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	id / DOF_ID_Range.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	pack / dunbrack / DunbrackRotamer.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	pack / task / PackerTask.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	pose / Pose.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	chemical / ResidueType.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	pack / dunbrack / RotamerLibrary.fwd.hh
sidechain_moves / PerturbRotamerSidechainMover.hh	pack / task / TaskFactory.fwd.hh
PoseFromPoseResourceMover.cc	pose / Pose.hh
PoseFromPoseResourceMover.cc	import_pose / PoseResource.hh
PoseFromPoseResourceMover.hh	pose / Pose.fwd.hh
ProlineFixMover.cc	optimization / AtomTreeMinimizer.hh
ProlineFixMover.cc	optimization / MinimizerOptions.hh
ProlineFixMover.cc	kinematics / MoveMap.hh
ProlineFixMover.cc	pack / pack_rotamers.hh
ProlineFixMover.cc	pack / task / PackerTask.hh
ProlineFixMover.cc	scoring / ScoreFunction.fwd.hh
ProlineFixMover.cc	scoring / ScoreFunction.hh
ProlineFixMover.cc	scoring / ScoreFunctionFactory.hh
ProlineFixMover.cc	pack / task / TaskFactory.hh
ProlineFixMover.hh	pose / Pose.fwd.hh
PSSM2BfactorMover.cc	conformation / Conformation.hh
PSSM2BfactorMover.cc	scoring / constraints / ConstraintSet.hh
PSSM2BfactorMover.cc	pose / extra_pose_info_util.hh
PSSM2BfactorMover.cc	kinematics / FoldTree.hh
PSSM2BfactorMover.cc	pose / PDBInfo.hh
PSSM2BfactorMover.cc	pose / Pose.hh
PSSM2BfactorMover.cc	conformation / Residue.hh
PSSM2BfactorMover.cc	id / SequenceMapping.hh
PSSM2BfactorMover.cc	sequence / SequenceProfile.hh
PSSM2BfactorMover.cc	scoring / constraints / SequenceProfileConstraint.hh
PSSM2BfactorMover.cc	pose / util.hh
PSSM2BfactorMover.hh	pose / Pose.fwd.hh
RandomOmegaFlipMover.cc	conformation / Conformation.hh
RandomOmegaFlipMover.cc	kinematics / MoveMap.hh
RandomOmegaFlipMover.cc	select / movemap / MoveMapFactory.hh
RandomOmegaFlipMover.cc	pose / Pose.hh
RandomOmegaFlipMover.cc	conformation / Residue.hh
RandomOmegaFlipMover.hh	kinematics / MoveMap.fwd.hh
RandomOmegaFlipMover.hh	select / movemap / MoveMapFactory.fwd.hh
RandomOmegaFlipMover.hh	pose / Pose.fwd.hh
RandomOmegaFlipMover.hh	id / TorsionID.fwd.hh
RandomTorsionMover.cc	conformation / Conformation.hh
RandomTorsionMover.cc	kinematics / MoveMap.hh
RandomTorsionMover.cc	select / movemap / MoveMapFactory.hh
RandomTorsionMover.cc	pose / Pose.hh
RandomTorsionMover.cc	conformation / Residue.hh
RandomTorsionMover.cc	select / residue_selector / util.hh
RandomTorsionMover.hh	kinematics / MoveMap.fwd.hh
RandomTorsionMover.hh	select / movemap / MoveMapFactory.fwd.hh
RandomTorsionMover.hh	pose / Pose.fwd.hh
RandomTorsionMover.hh	id / TorsionID.fwd.hh
rational_mc / RationalMonteCarlo.cc	pose / Pose.hh
rational_mc / RationalMonteCarlo.cc	scoring / ScoreFunction.hh
rational_mc / RationalMonteCarlo.hh	pose / Pose.fwd.hh
rational_mc / RationalMonteCarlo.hh	scoring / ScoreFunction.fwd.hh
rational_mc / RationalMonteCarlo.hh	types.hh
ReportEffectivePKA.cc	chemical / AA.hh
ReportEffectivePKA.cc	chemical / AtomType.hh
ReportEffectivePKA.cc	chemical / AtomTypeSet.hh
ReportEffectivePKA.cc	optimization / CartesianMinimizer.hh
ReportEffectivePKA.cc	conformation / Conformation.hh
ReportEffectivePKA.cc	scoring / Energies.hh
ReportEffectivePKA.cc	scoring / EnergyGraph.hh
ReportEffectivePKA.cc	optimization / MinimizerOptions.hh
ReportEffectivePKA.cc	kinematics / MoveMap.hh
ReportEffectivePKA.cc	pose / PDBInfo.hh
ReportEffectivePKA.cc	pose / Pose.hh
ReportEffectivePKA.cc	conformation / Residue.hh
ReportEffectivePKA.cc	conformation / ResidueFactory.hh
ReportEffectivePKA.cc	chemical / ResidueTypeSet.hh
ReportEffectivePKA.cc	scoring / ScoreFunction.hh
ReportEffectivePKA.cc	scoring / ScoreFunctionFactory.hh
ReportEffectivePKA.cc	conformation / symmetry / SymmetricConformation.hh
ReportEffectivePKA.cc	conformation / symmetry / SymmetryInfo.hh
ReportEffectivePKA.cc	pack / task / TaskFactory.hh
ReportEffectivePKA.cc	pack / task / operation / TaskOperation.hh
ReportEffectivePKA.cc	scoring / cryst / util.hh
ReportEffectivePKA.cc	pose / symmetry / util.hh
ReportEffectivePKA.cc	conformation / util.hh
ReportEffectivePKA.cc	pose / util.hh
ReportEffectivePKA.hh	id / AtomID.hh
ReportEffectivePKA.hh	id / AtomID_Map.hh
ReportEffectivePKA.hh	optimization / Minimizer.hh
ReportEffectivePKA.hh	optimization / Multifunc.hh
ReportEffectivePKA.hh	pack / task / PackerTask.hh
ReportEffectivePKA.hh	scoring / ScoreFunction.hh
ReportEffectivePKA.hh	pack / task / TaskFactory.hh
ReportXYZ.cc	pose / chains_util.hh
ReportXYZ.cc	conformation / Conformation.hh
ReportXYZ.cc	pose / extra_pose_info_util.hh
ReportXYZ.cc	pose / Pose.hh
ReportXYZ.cc	pose / util.hh
ReportXYZ.hh	pose / Pose.fwd.hh
RepulsiveOnlyMover.cc	chemical / AtomType.hh
RepulsiveOnlyMover.cc	pose / Pose.hh
RepulsiveOnlyMover.cc	conformation / Residue.hh
RepulsiveOnlyMover.cc	chemical / ResidueTypeSet.hh
RepulsiveOnlyMover.cc	pose / variant_util.hh
RepulsiveOnlyMover.cc	chemical / VariantType.hh
RepulsiveOnlyMover.hh	pose / Pose.fwd.hh
ResetFoldTree.cc	kinematics / FoldTree.hh
ResetFoldTree.cc	pose / Pose.hh
ResetFoldTree.cc	pose / util.hh
ResetFoldTree.hh	pose / Pose.fwd.hh
ResetFullModelInfoMover.cc	pose / full_model_info / FullModelInfo.hh
ResetFullModelInfoMover.cc	pose / Pose.hh
ResetFullModelInfoMover.cc	pose / full_model_info / util.hh
ResetFullModelInfoMover.hh	pose / Pose.fwd.hh
ResTypeFragmentMover.cc	fragment / FragData.hh
ResTypeFragmentMover.cc	fragment / FragSet.hh
ResTypeFragmentMover.cc	fragment / Frame.hh
ResTypeFragmentMover.cc	fragment / FrameList.hh
ResTypeFragmentMover.cc	kinematics / MoveMap.hh
ResTypeFragmentMover.cc	pose / Pose.hh
ResTypeFragmentMover.cc	conformation / Residue.hh
ResTypeFragmentMover.cc	conformation / ResidueFactory.hh
ResTypeFragmentMover.cc	chemical / ResidueTypeSet.hh
ResTypeFragmentMover.cc	types.hh
ResTypeFragmentMover.cc	pose / util.hh
ResTypeFragmentMover.hh	fragment / FragSet.fwd.hh
ResTypeFragmentMover.hh	fragment / Frame.fwd.hh
ResTypeFragmentMover.hh	fragment / FrameList.fwd.hh
ResTypeFragmentMover.hh	pose / Pose.fwd.hh
ResTypeFragmentMover.hh	types.hh
ReturnSidechainMover.cc	chemical / AtomType.hh
ReturnSidechainMover.cc	scoring / Energies.hh
ReturnSidechainMover.cc	pose / Pose.hh
ReturnSidechainMover.cc	chemical / ResidueProperties.hh
ReturnSidechainMover.cc	chemical / ResidueType.hh
ReturnSidechainMover.cc	conformation / symmetry / SymmetricConformation.hh
ReturnSidechainMover.cc	conformation / symmetry / SymmetryInfo.hh
ReturnSidechainMover.cc	types.hh
ReturnSidechainMover.cc	pose / symmetry / util.hh
ReturnSidechainMover.cc	chemical / util.hh
ReturnSidechainMover.cc	pose / variant_util.hh
ReturnSidechainMover.hh	pose / Pose.hh
ReturnSidechainMover.hh	types.hh
RingConformationMover.cc	kinematics / MoveMap.hh
RingConformationMover.cc	select / movemap / MoveMapFactory.hh
RingConformationMover.cc	pose / Pose.hh
RingConformationMover.cc	conformation / Residue.hh
RingConformationMover.cc	chemical / rings / RingConformer.hh
RingConformationMover.cc	chemical / rings / RingConformerSet.hh
RingConformationMover.cc	types.hh
RingConformationMover.hh	kinematics / MoveMap.fwd.hh
RingConformationMover.hh	select / movemap / MoveMapFactory.fwd.hh
RingConformationMover.hh	types.hh
SaveSequenceToCommentsMover.cc	pose / extra_pose_info_util.hh
SaveSequenceToCommentsMover.cc	pose / Pose.hh
SaveSequenceToCommentsMover.cc	pose / util.hh
ScoreMover.cc	pose / datacache / CacheableDataType.hh
ScoreMover.cc	scoring / Energies.hh
ScoreMover.cc	pose / extra_pose_info_util.hh
ScoreMover.cc	pose / Pose.hh
ScoreMover.cc	scoring / rms_util.hh
ScoreMover.cc	scoring / ScoreFunction.hh
ScoreMover.cc	scoring / ScoreFunctionFactory.hh
ScoreMover.cc	io / raw_data / ScoreMap.hh
ScoreMover.cc	types.hh
ScoreMover.cc	pose / util.hh
ScoreMover.hh	scoring / ScoreFunction.fwd.hh
ScoreMover.hh	types.hh
SequenceProfileMover.cc	pose / Pose.hh
SequenceProfileMover.cc	scoring / ScoreFunction.hh
SequenceProfileMover.cc	scoring / ScoreFunctionFactory.hh
SequenceProfileMover.cc	scoring / ScoreType.hh
SequenceProfileMover.cc	sequence / SequenceProfile.hh
SequenceProfileMover.cc	scoring / constraints / SequenceProfileConstraint.hh
SequenceProfileMover.cc	types.hh
SequenceProfileMover.hh	pose / Pose.fwd.hh
SequenceProfileMover.hh	types.hh
sidechain_moves / SetChiMover.cc	chemical / AA.hh
sidechain_moves / SetChiMover.cc	pose / Pose.hh
sidechain_moves / SetChiMover.cc	conformation / Residue.hh
sidechain_moves / SetChiMover.cc	pose / ResidueIndexDescription.hh
sidechain_moves / SetChiMover.cc	pose / selection.hh
sidechain_moves / SetChiMover.cc	types.hh
sidechain_moves / SetChiMover.hh	pose / Pose.fwd.hh
sidechain_moves / SetChiMover.hh	pose / ResidueIndexDescription.fwd.hh
sidechain_moves / SetChiMover.hh	types.hh
SetTorsion.cc	chemical / AA.hh
SetTorsion.cc	id / AtomID.hh
SetTorsion.cc	conformation / Conformation.hh
SetTorsion.cc	kinematics / FoldTree.hh
SetTorsion.cc	kinematics / Jump.hh
SetTorsion.cc	id / NamedAtomID.hh
SetTorsion.cc	pose / Pose.hh
SetTorsion.cc	scoring / Ramachandran.hh
SetTorsion.cc	conformation / Residue.hh
SetTorsion.cc	scoring / ScoringManager.hh
SetTorsion.cc	pose / selection.hh
SetTorsion.cc	types.hh
SetTorsion.hh	id / NamedAtomID.hh
SetTorsion.hh	pose / Pose.fwd.hh
SetTorsion.hh	types.hh
SetupMetalsMover.cc	id / AtomID.hh
SetupMetalsMover.cc	util / metalloproteins_util.hh
SetupMetalsMover.cc	pose / Pose.hh
SetupMetalsMover.cc	conformation / Residue.hh
SetupMetalsMover.cc	select / residue_selector / ResidueSelector.hh
SetupMetalsMover.cc	select / residue_selector / ResidueSelectorFactory.hh
SetupMetalsMover.cc	pose / selection.hh
SetupMetalsMover.cc	select / residue_selector / util.hh
SetupMetalsMover.hh	pose / Pose.fwd.hh
SetupMetalsMover.hh	select / residue_selector / ResidueSelector.fwd.hh
SetupMetalsMover.hh	types.hh
ShakeStructureMover.cc	chemical / AA.hh
ShakeStructureMover.cc	id / AtomID.hh
ShakeStructureMover.cc	scoring / constraints / AtomPairConstraint.hh
ShakeStructureMover.cc	optimization / AtomTreeMinimizer.hh
ShakeStructureMover.cc	scoring / constraints / Constraints.hh
ShakeStructureMover.cc	scoring / constraints / ConstraintSet.fwd.hh
ShakeStructureMover.cc	scoring / constraints / ConstraintSet.hh
ShakeStructureMover.cc	id / DOF_ID.hh
ShakeStructureMover.cc	scoring / func / Func.hh
ShakeStructureMover.cc	scoring / func / HarmonicFunc.hh
ShakeStructureMover.cc	kinematics / Jump.hh
ShakeStructureMover.cc	optimization / MinimizerOptions.hh
ShakeStructureMover.cc	kinematics / MoveMap.hh
ShakeStructureMover.cc	pose / Pose.fwd.hh
ShakeStructureMover.cc	pose / Pose.hh
ShakeStructureMover.cc	conformation / Residue.hh
ShakeStructureMover.cc	chemical / ResidueTypeSet.fwd.hh
ShakeStructureMover.cc	scoring / rms_util.hh
ShakeStructureMover.cc	scoring / ScoreFunction.hh
ShakeStructureMover.cc	scoring / ScoreFunctionFactory.hh
ShakeStructureMover.cc	types.hh
ShakeStructureMover.cc	pose / util.hh
ShakeStructureMover.hh	pose / Pose.fwd.hh
ShakeStructureMover.hh	scoring / ScoreFunction.fwd.hh
ShakeStructureMover.hh	types.hh
ShortBackrubMover.cc	kinematics / FoldTree.hh
ShortBackrubMover.cc	pose / Pose.hh
ShortBackrubMover.cc	conformation / Residue.hh
ShortBackrubMover.hh	pose / Pose.fwd.hh
ShortBackrubMover.hh	types.hh
sidechain_moves / SidechainMCMover.cc	pack / task / PackerTask.hh
sidechain_moves / SidechainMCMover.cc	pose / Pose.hh
sidechain_moves / SidechainMCMover.cc	conformation / Residue.hh
sidechain_moves / SidechainMCMover.cc	chemical / ResidueType.hh
sidechain_moves / SidechainMCMover.cc	scoring / ScoreFunction.hh
sidechain_moves / SidechainMCMover.cc	pack / interaction_graph / SimpleInteractionGraph.hh
sidechain_moves / SidechainMCMover.cc	pack / task / TaskFactory.hh
sidechain_moves / SidechainMCMover.cc	pack / task / operation / TaskOperation.hh
sidechain_moves / SidechainMCMover.cc	pack / task / operation / TaskOperations.hh
sidechain_moves / SidechainMCMover.cc	types.hh
sidechain_moves / SidechainMCMover.hh	pack / task / PackerTask.fwd.hh
sidechain_moves / SidechainMCMover.hh	pose / Pose.fwd.hh
sidechain_moves / SidechainMCMover.hh	chemical / ResidueType.fwd.hh
sidechain_moves / SidechainMCMover.hh	pack / dunbrack / RotamerLibrary.fwd.hh
sidechain_moves / SidechainMCMover.hh	pack / dunbrack / RotamerLibraryScratchSpace.fwd.hh
sidechain_moves / SidechainMCMover.hh	scoring / ScoreFunction.hh
sidechain_moves / SidechainMCMover.hh	pack / interaction_graph / SimpleInteractionGraph.fwd.hh
sidechain_moves / SidechainMover.cc	conformation / Conformation.hh
sidechain_moves / SidechainMover.cc	id / DOF_ID_Range.hh
sidechain_moves / SidechainMover.cc	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / SidechainMover.cc	pack / task / PackerTask.hh
sidechain_moves / SidechainMover.cc	pose / Pose.hh
sidechain_moves / SidechainMover.cc	conformation / Residue.hh
sidechain_moves / SidechainMover.cc	conformation / ResidueFactory.hh
sidechain_moves / SidechainMover.cc	chemical / ResidueType.hh
sidechain_moves / SidechainMover.cc	pack / dunbrack / RotamerLibraryScratchSpace.hh
sidechain_moves / SidechainMover.cc	pack / dunbrack / SingleResidueDunbrackLibrary.hh
sidechain_moves / SidechainMover.cc	pack / rotamers / SingleResidueRotamerLibraryFactory.hh
sidechain_moves / SidechainMover.cc	pack / task / TaskFactory.hh
sidechain_moves / SidechainMover.cc	pack / task / operation / TaskOperations.hh
sidechain_moves / SidechainMover.cc	id / TorsionID.hh
sidechain_moves / SidechainMover.cc	id / TorsionID_Range.hh
sidechain_moves / SidechainMover.cc	types.hh
sidechain_moves / SidechainMover.hh	id / DOF_ID_Range.fwd.hh
sidechain_moves / SidechainMover.hh	pack / dunbrack / DunbrackRotamer.fwd.hh
sidechain_moves / SidechainMover.hh	pack / task / PackerTask.fwd.hh
sidechain_moves / SidechainMover.hh	pose / Pose.fwd.hh
sidechain_moves / SidechainMover.hh	conformation / Residue.fwd.hh
sidechain_moves / SidechainMover.hh	chemical / ResidueType.fwd.hh
sidechain_moves / SidechainMover.hh	pack / dunbrack / RotamerLibrary.fwd.hh
sidechain_moves / SidechainMover.hh	pack / dunbrack / RotamerLibraryScratchSpace.fwd.hh
sidechain_moves / SidechainMover.hh	pack / task / TaskFactory.fwd.hh
sidechain_moves / SidechainMoverBase.cc	conformation / Conformation.hh
sidechain_moves / SidechainMoverBase.cc	id / DOF_ID_Range.hh
sidechain_moves / SidechainMoverBase.cc	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / SidechainMoverBase.cc	pack / task / PackerTask.hh
sidechain_moves / SidechainMoverBase.cc	pose / Pose.hh
sidechain_moves / SidechainMoverBase.cc	conformation / Residue.hh
sidechain_moves / SidechainMoverBase.cc	conformation / ResidueFactory.hh
sidechain_moves / SidechainMoverBase.cc	chemical / ResidueType.hh
sidechain_moves / SidechainMoverBase.cc	pack / dunbrack / RotamerLibraryScratchSpace.hh
sidechain_moves / SidechainMoverBase.cc	scoring / ScoringManager.hh
sidechain_moves / SidechainMoverBase.cc	pack / dunbrack / SingleResidueDunbrackLibrary.hh
sidechain_moves / SidechainMoverBase.cc	pack / task / TaskFactory.hh
sidechain_moves / SidechainMoverBase.cc	pack / task / operation / TaskOperations.hh
sidechain_moves / SidechainMoverBase.cc	id / TorsionID.hh
sidechain_moves / SidechainMoverBase.cc	types.hh
sidechain_moves / SidechainMoverBase.hh	id / DOF_ID_Range.fwd.hh
sidechain_moves / SidechainMoverBase.hh	pack / dunbrack / DunbrackRotamer.fwd.hh
sidechain_moves / SidechainMoverBase.hh	pack / dunbrack / DunbrackRotamer.hh
sidechain_moves / SidechainMoverBase.hh	pack / task / PackerTask.fwd.hh
sidechain_moves / SidechainMoverBase.hh	pose / Pose.fwd.hh
sidechain_moves / SidechainMoverBase.hh	conformation / Residue.fwd.hh
sidechain_moves / SidechainMoverBase.hh	chemical / ResidueType.fwd.hh
sidechain_moves / SidechainMoverBase.hh	pack / dunbrack / RotamerLibrary.fwd.hh
sidechain_moves / SidechainMoverBase.hh	pack / task / TaskFactory.fwd.hh
SimpleThreadingMover.cc	chemical / AA.hh
SimpleThreadingMover.cc	pose / Pose.hh
SimpleThreadingMover.cc	scoring / ScoreFunction.hh
SimpleThreadingMover.cc	scoring / ScoreFunctionFactory.hh
SimpleThreadingMover.cc	pose / selection.hh
SimpleThreadingMover.cc	pack / task / TaskFactory.hh
SimpleThreadingMover.cc	pack / task / operation / TaskOperation.hh
SimpleThreadingMover.cc	pack / task / operation / TaskOperations.hh
SimpleThreadingMover.cc	pose / symmetry / util.hh
SimpleThreadingMover.cc	select / util.hh
SimpleThreadingMover.hh	pose / Pose.hh
SimpleThreadingMover.hh	scoring / ScoreFunction.fwd.hh
bb_sampler / SmallBBSampler.cc	pose / util.hh
SmoothFragmentMover.cc	fragment / FragSet.hh
SmoothFragmentMover.cc	fragment / Frame.hh
SmoothFragmentMover.cc	fragment / FrameList.hh
SmoothFragmentMover.cc	kinematics / MoveMap.hh
SmoothFragmentMover.cc	types.hh
SmoothFragmentMover.hh	pose / Pose.fwd.hh
SmoothFragmentMover.hh	types.hh
StorePoseSnapshot.cc	pose / Pose.hh
StorePoseSnapshot.cc	types.hh
StorePoseSnapshot.hh	id / NamedAtomID.hh
StorePoseSnapshot.hh	pose / Pose.fwd.hh
StorePoseSnapshot.hh	types.hh
StructProfileMover.cc	scoring / constraints / ConstraintSet.hh
StructProfileMover.cc	scoring / dssp / Dssp.hh
StructProfileMover.cc	scoring / EnvPairPotential.hh
StructProfileMover.cc	pose / Pose.hh
StructProfileMover.cc	select / residue_selector / ResidueSelector.hh
StructProfileMover.cc	scoring / ScoreFunction.hh
StructProfileMover.cc	scoring / ScoreFunctionFactory.hh
StructProfileMover.cc	scoring / ScoringManager.hh
StructProfileMover.cc	sequence / Sequence.hh
StructProfileMover.cc	sequence / SequenceProfile.hh
StructProfileMover.cc	scoring / constraints / SequenceProfileConstraint.hh
StructProfileMover.cc	util / SwitchResidueTypeSet.hh
StructProfileMover.cc	conformation / symmetry / SymmetricConformation.hh
StructProfileMover.cc	conformation / symmetry / SymmetryInfo.fwd.hh
StructProfileMover.cc	conformation / symmetry / SymmetryInfo.hh
StructProfileMover.cc	types.hh
StructProfileMover.cc	select / residue_selector / util.hh
StructProfileMover.cc	pose / util.hh
StructProfileMover.cc	pose / symmetry / util.hh
StructProfileMover.hh	pose / Pose.fwd.hh
StructProfileMover.hh	select / residue_selector / ResidueSelector.fwd.hh
StructProfileMover.hh	types.hh
bb_sampler / SugarBBSampler.cc	chemical / carbohydrates / CarbohydrateInfo.hh
bb_sampler / SugarBBSampler.cc	scoring / carbohydrates / CHIEnergyFunction.hh
bb_sampler / SugarBBSampler.cc	conformation / carbohydrates / GlycanTreeSet.hh
bb_sampler / SugarBBSampler.cc	scoring / carbohydrates / OmegaPreferencesFunction.hh
bb_sampler / SugarBBSampler.cc	pose / PDBInfo.hh
bb_sampler / SugarBBSampler.cc	conformation / Residue.hh
bb_sampler / SugarBBSampler.cc	scoring / ScoringManager.hh
bb_sampler / SugarBBSampler.cc	types.hh
bb_sampler / SugarBBSampler.cc	pose / util.hh
bb_sampler / SugarBBSampler.cc	pose / carbohydrates / util.hh
bb_sampler / SugarBBSampler.cc	scoring / carbohydrates / util.hh
SuperimposeMover.cc	id / AtomID.hh
SuperimposeMover.cc	id / AtomID_Map.hh
SuperimposeMover.cc	pose / datacache / cacheable_observers.hh
SuperimposeMover.cc	import_pose / import_pose.hh
SuperimposeMover.cc	pose / PDBInfo.hh
SuperimposeMover.cc	pose / Pose.hh
SuperimposeMover.cc	conformation / Residue.hh
SuperimposeMover.cc	scoring / rms_util.hh
SuperimposeMover.cc	pose / selection.hh
SuperimposeMover.cc	id / types.hh
SuperimposeMover.cc	types.hh
SuperimposeMover.cc	pose / util.hh
SuperimposeMover.hh	pose / Pose.hh
SwitchChainOrderMover.cc	pose / chains_util.hh
SwitchChainOrderMover.cc	conformation / Conformation.hh
SwitchChainOrderMover.cc	pose / extra_pose_info_util.hh
SwitchChainOrderMover.cc	kinematics / FoldTree.hh
SwitchChainOrderMover.cc	pose / PDBInfo.hh
SwitchChainOrderMover.cc	pose / Pose.hh
SwitchChainOrderMover.cc	scoring / ScoreFunction.hh
SwitchChainOrderMover.cc	scoring / ScoreFunctionFactory.hh
SwitchChainOrderMover.cc	pose / subpose_manipulation_util.hh
SwitchChainOrderMover.cc	pose / util.hh
SwitchChainOrderMover.hh	pose / Pose.fwd.hh
SwitchChainOrderMover.hh	scoring / ScoreFunction.fwd.hh
SwitchResidueTypeSetMover.cc	chemical / ChemicalManager.hh
SwitchResidueTypeSetMover.cc	kinematics / Jump.hh
SwitchResidueTypeSetMover.cc	chemical / ResidueType.hh
SwitchResidueTypeSetMover.cc	util / SwitchResidueTypeSet.hh
SwitchResidueTypeSetMover.hh	pose / Pose.fwd.hh
SymmetricFragmentMover.cc	fragment / FragData.hh
SymmetricFragmentMover.cc	fragment / Frame.hh
SymmetricFragmentMover.hh	fragment / FragSet.hh
SymmetricFragmentMover.hh	fragment / Frame.fwd.hh
SymmetricFragmentMover.hh	kinematics / MoveMap.hh
SymmetricFragmentMover.hh	pose / Pose.fwd.hh
TailsScoreMover.cc	pose / extra_pose_info_util.hh
TailsScoreMover.cc	pose / Pose.hh
TailsScoreMover.cc	types.hh
TailsScoreMover.cc	pose / util.hh
TailsScoreMover.hh	scoring / ScoreFunction.hh
TailsScoreMover.hh	types.hh
TorsionDOFMover.cc	kinematics / AtomTree.hh
TorsionDOFMover.cc	conformation / Conformation.hh
TorsionDOFMover.cc	pose / Pose.hh
TorsionDOFMover.cc	scoring / ScoreFunction.hh
TorsionDOFMover.cc	scoring / ScoreType.hh
TorsionDOFMover.cc	types.hh
TorsionDOFMover.hh	id / AtomID.hh
TorsionDOFMover.hh	pose / Pose.fwd.hh
TorsionDOFMover.hh	scoring / ScoreFunction.fwd.hh
TorsionDOFMover.hh	types.hh
TorsionSetMover.cc	pose / Pose.hh
TorsionSetMover.hh	id / TorsionID.hh
Tumble.cc	select / residue_selector / ChainSelector.hh
Tumble.cc	kinematics / FoldTree.hh
Tumble.cc	pose / Pose.hh
Tumble.cc	conformation / Residue.hh
Tumble.cc	conformation / ResidueFactory.hh
Tumble.cc	pose / ResidueIndexDescription.hh
Tumble.cc	select / residue_selector / ResidueSpanSelector.hh
Tumble.cc	chemical / ResidueType.hh
Tumble.cc	chemical / ResidueTypeSet.hh
Tumble.cc	pose / selection.hh
Tumble.cc	pack / task / TaskFactory.hh
Tumble.cc	pack / task / operation / TaskOperation.hh
Tumble.cc	select / util.hh
Tumble.cc	pose / util.hh
Tumble.hh	pose / Pose.fwd.hh
Tumble.hh	select / residue_selector / ResidueSelector.fwd.hh
Tumble.hh	scoring / ScoreFunction.hh
Tumble.hh	pack / task / TaskFactory.hh
Tumble.hh	pack / task / operation / TaskOperation.fwd.hh
Tumble.hh	types.hh
UniformPositionMover.cc	conformation / Conformation.hh
UniformPositionMover.cc	kinematics / Jump.hh
UniformPositionMover.cc	pose / Pose.hh
UniformPositionMover.cc	kinematics / Stub.hh
UniformPositionMover.cc	types.hh
UniformPositionMover.hh	pose / Pose.fwd.hh
UniformPositionMover.hh	types.hh
VirtualRootMover.cc	chemical / AA.hh
VirtualRootMover.cc	conformation / Conformation.hh
VirtualRootMover.cc	pose / extra_pose_info_util.hh
VirtualRootMover.cc	kinematics / FoldTree.hh
VirtualRootMover.cc	pose / Pose.hh
VirtualRootMover.cc	conformation / Residue.hh
VirtualRootMover.cc	types.hh
VirtualRootMover.cc	pose / util.hh
VirtualRootMover.hh	types.hh
WobbleMover.cc	kinematics / FoldTree.hh
WobbleMover.cc	fragment / FragSet.hh
WobbleMover.cc	kinematics / MoveMap.hh
WobbleMover.cc	pose / Pose.hh
WobbleMover.hh	fragment / FragSet.fwd.hh
WobbleMover.hh	fragment / Frame.fwd.hh
WobbleMover.hh	pose / Pose.fwd.hh
WobbleMover.hh	types.hh
WriteFiltersToPose.cc	pose / extra_pose_info_util.hh
WriteFiltersToPose.cc	pose / util.hh
WriteFiltersToPose.hh	pose / Pose.fwd.hh
WriteFiltersToPose.hh	scoring / ScoreFunction.hh
WriteFiltersToPose.hh	types.hh
WriteSSEMover.cc	conformation / Conformation.hh
WriteSSEMover.cc	scoring / dssp / Dssp.hh
WriteSSEMover.cc	pose / extra_pose_info_util.hh
WriteSSEMover.cc	pose / Pose.hh
WriteSSEMover.cc	io / external / PsiPredInterface.hh
WriteSSEMover.hh	scoring / dssp / Dssp.hh
WriteSSEMover.hh	pose / Pose.fwd.hh
WriteSSEMover.hh	io / external / PsiPredInterface.fwd.hh
WriteSSEMover.hh	types.hh