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src
protocols
denovo_design
components
components → core Relation
File in src/protocols/denovo_design/components
Includes file in src/core
ExtendedPoseBuilder.cc
chemical
/
ChemicalManager.hh
ExtendedPoseBuilder.cc
conformation
/
Conformation.hh
ExtendedPoseBuilder.cc
kinematics
/
FoldTree.hh
ExtendedPoseBuilder.cc
pose
/
Pose.hh
ExtendedPoseBuilder.cc
conformation
/
Residue.hh
ExtendedPoseBuilder.cc
conformation
/
ResidueFactory.hh
ExtendedPoseBuilder.cc
chemical
/
ResidueTypeSet.hh
ExtendedPoseBuilder.cc
pose
/
variant_util.hh
ExtendedPoseBuilder.hh
pose
/
Pose.fwd.hh
FoldGraph.cc
kinematics
/
FoldTree.hh
FoldGraph.cc
pose
/
Pose.hh
FoldGraph.cc
conformation
/
Residue.hh
FoldGraph.hh
kinematics
/
FoldTree.fwd.hh
FoldGraph.hh
pose
/
Pose.fwd.hh
FoldGraph.hh
types.hh
IdealAbegoGenerator.hh
types.hh
Picker.cc
sequence
/
ABEGOManager.hh
Picker.cc
conformation
/
Conformation.hh
Picker.cc
fragment
/
ConstantLengthFragSet.hh
Picker.hh
fragment
/
Frame.fwd.hh
Picker.hh
fragment
/
FrameList.hh
PoseFolder.hh
pose
/
Pose.fwd.hh
PoseFolder.hh
select
/
residue_selector
/
ResidueSelector.fwd.hh
RandomTorsionPoseFolder.cc
pose
/
Pose.hh
RandomTorsionPoseFolder.cc
pose
/
util.hh
RemodelLoopMoverPoseFolder.cc
conformation
/
Conformation.hh
RemodelLoopMoverPoseFolder.cc
fragment
/
ConstantLengthFragSet.hh
RemodelLoopMoverPoseFolder.cc
kinematics
/
FoldTree.hh
RemodelLoopMoverPoseFolder.cc
pose
/
Pose.hh
RemodelLoopMoverPoseFolder.cc
scoring
/
ScoreFunction.hh
RemodelLoopMoverPoseFolder.cc
scoring
/
ScoreFunctionFactory.hh
RemodelLoopMoverPoseFolder.cc
pose
/
symmetry
/
util.hh
RemodelLoopMoverPoseFolder.hh
kinematics
/
MoveMap.fwd.hh
RemodelLoopMoverPoseFolder.hh
scoring
/
ScoreFunction.fwd.hh
Segment.cc
pose
/
Pose.hh
Segment.cc
pose
/
variant_util.hh
Segment.hh
pose
/
Pose.fwd.hh
Segment.hh
conformation
/
Residue.fwd.hh
SegmentPairing.cc
select
/
residue_selector
/
ResidueVector.hh
SegmentPairing.fwd.hh
types.hh
SheetDB.cc
chemical
/
ChemicalManager.hh
SheetDB.cc
kinematics
/
FoldTree.hh
SheetDB.cc
pose
/
PDBInfo.hh
SheetDB.cc
pose
/
Pose.hh
SheetDB.cc
conformation
/
ResidueFactory.hh
SheetDB.cc
chemical
/
ResidueTypeSet.hh
SheetDB.cc
scoring
/
ScoreFunction.hh
SheetDB.cc
io
/
silent
/
SilentFileData.hh
SheetDB.cc
io
/
silent
/
SilentFileOptions.hh
SheetDB.cc
util
/
SwitchResidueTypeSet.hh
SheetDB.cc
pose
/
variant_util.hh
SheetDB.hh
pose
/
Pose.fwd.hh
StructureData.cc
sequence
/
ABEGOManager.hh
StructureData.cc
pose
/
datacache
/
CacheableDataType.hh
StructureData.cc
pose
/
datacache
/
CacheableObserver.fwd.hh
StructureData.cc
pose
/
datacache
/
CacheableObserverType.hh
StructureData.cc
conformation
/
Conformation.hh
StructureData.cc
scoring
/
dssp
/
Dssp.hh
StructureData.cc
kinematics
/
FoldTree.hh
StructureData.cc
pose
/
datacache
/
ObserverCache.hh
StructureData.cc
pose
/
PDBInfo.hh
StructureData.cc
pose
/
Pose.hh
StructureData.cc
io
/
Remarks.hh
StructureData.cc
pose
/
symmetry
/
util.hh
StructureData.cc
chemical
/
VariantType.hh
StructureData.fwd.hh
types.hh
StructureData.hh
kinematics
/
FoldTree.fwd.hh
StructureData.hh
pose
/
Pose.fwd.hh
StructureData.hh
io
/
Remarks.fwd.hh
StructureData.hh
types.hh
StructureDataFactory.cc
sequence
/
ABEGOManager.hh
StructureDataFactory.cc
pose
/
datacache
/
CacheableDataType.hh
StructureDataFactory.cc
pose
/
datacache
/
CacheableObserverType.hh
StructureDataFactory.cc
conformation
/
Conformation.hh
StructureDataFactory.cc
scoring
/
dssp
/
Dssp.hh
StructureDataFactory.cc
pose
/
datacache
/
ObserverCache.hh
StructureDataFactory.cc
pose
/
PDBInfo.hh
StructureDataFactory.cc
pose
/
Pose.hh
StructureDataFactory.cc
io
/
Remarks.hh
StructureDataFactory.cc
select
/
residue_selector
/
ResidueVector.hh
StructureDataFactory.hh
pose
/
Pose.fwd.hh
StructureDataFactory.hh
io
/
Remarks.fwd.hh
StructureDataFactory.hh
select
/
residue_selector
/
ResidueSelector.fwd.hh
StructureDataObserver.cc
pose
/
datacache
/
CacheableObserverType.hh
StructureDataObserver.cc
conformation
/
Conformation.hh
StructureDataObserver.cc
conformation
/
signals
/
LengthEvent.hh
StructureDataObserver.cc
pose
/
datacache
/
ObserverCache.hh
StructureDataObserver.cc
pose
/
Pose.hh
StructureDataObserver.hh
pose
/
datacache
/
CacheableObserver.hh
StructureDataObserver.hh
conformation
/
signals
/
LengthEvent.hh
StructureDataWithPose.cc
conformation
/
Conformation.hh
StructureDataWithPose.cc
kinematics
/
Edge.hh
StructureDataWithPose.cc
scoring
/
Energies.hh
StructureDataWithPose.cc
kinematics
/
FoldTree.hh
StructureDataWithPose.cc
pack
/
task
/
operation
/
OptCysHG.hh
StructureDataWithPose.cc
pack
/
pack_rotamers.hh
StructureDataWithPose.cc
util
/
SwitchResidueTypeSet.hh
StructureDataWithPose.cc
pack
/
task
/
TaskFactory.hh
StructureDataWithPose.cc
pose
/
util.hh
VectorSelector.hh
types.hh
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