loop_closure → core Relation

File in src/protocols/loops/loop_closure	Includes file in src/core
ccd / ccd_closure.cc	pose / Pose.hh
ccd / ccd_closure.cc	conformation / Residue.hh
ccd / ccd_closure.cc	chemical / ResidueConnection.hh
ccd / ccd_closure.cc	kinematics / Stub.hh
ccd / ccd_closure.cc	types.hh
ccd / ccd_closure.hh	pose / Pose.fwd.hh
ccd / ccd_closure.hh	types.hh
ccd / CCDLoopClosureMover.cc	kinematics / MoveMap.hh
ccd / CCDLoopClosureMover.cc	pose / Pose.hh
ccd / CCDLoopClosureMover.cc	conformation / Residue.hh
ccd / CCDLoopClosureMover.cc	chemical / util.hh
ccd / CCDLoopClosureMover.cc	chemical / VariantType.hh
ccd / CCDLoopClosureMover.hh	kinematics / MoveMap.fwd.hh
ccd / CCDLoopClosureMover.hh	conformation / Residue.fwd.hh
ccd / CCDLoopClosureMover.hh	id / TorsionID.fwd.hh
ccd / CCDLoopClosureMover.hh	types.hh
jacobi / JacobiLoopClosureMover.cc	kinematics / AtomTree.hh
jacobi / JacobiLoopClosureMover.cc	kinematics / FoldTree.hh
jacobi / JacobiLoopClosureMover.cc	kinematics / jacobian / JacobianStructure.hh
jacobi / JacobiLoopClosureMover.cc	kinematics / jacobian / ModuleType1.hh
jacobi / JacobiLoopClosureMover.cc	kinematics / MoveMap.hh
jacobi / JacobiLoopClosureMover.cc	pose / Pose.hh
jacobi / JacobiLoopClosureMover.cc	conformation / Residue.hh
jacobi / JacobiLoopClosureMover.cc	chemical / ResidueConnection.hh
jacobi / JacobiLoopClosureMover.cc	kinematics / jacobian / SeriesJacobians.hh
jacobi / JacobiLoopClosureMover.hh	chemical / AtomICoor.hh
jacobi / JacobiLoopClosureMover.hh	id / AtomID.hh
jacobi / JacobiLoopClosureMover.hh	kinematics / MoveMap.fwd.hh
jacobi / JacobiLoopClosureMover.hh	kinematics / RT.fwd.hh
jacobi / JacobiLoopClosureMover.hh	kinematics / jacobian / SeriesJacobians.fwd.hh
kinematic_closure / KinematicMover.cc	chemical / AtomType.hh
kinematic_closure / KinematicMover.cc	conformation / Conformation.hh
kinematic_closure / KinematicMover.cc	id / DOF_ID.hh
kinematic_closure / KinematicMover.cc	pose / Pose.hh
kinematic_closure / KinematicMover.cc	conformation / ppo_torsion_bin.hh
kinematic_closure / KinematicMover.cc	scoring / Ramachandran.hh
kinematic_closure / KinematicMover.cc	conformation / Residue.hh
kinematic_closure / KinematicMover.cc	conformation / ResidueFactory.hh
kinematic_closure / KinematicMover.cc	scoring / ScoreFunction.hh
kinematic_closure / KinematicMover.cc	scoring / ScoringManager.hh
kinematic_closure / KinematicMover.cc	id / TorsionID.hh
kinematic_closure / KinematicMover.cc	conformation / util.hh
kinematic_closure / KinematicMover.hh	chemical / AA.hh
kinematic_closure / KinematicMover.hh	conformation / ppo_torsion_bin.fwd.hh
kinematic_closure / KinematicMover.hh	conformation / Residue.fwd.hh
kinematic_closure / KinematicMover.hh	scoring / ScoreFunction.fwd.hh
kinematic_closure / KinematicPerturber.cc	chemical / AA.hh
kinematic_closure / KinematicPerturber.cc	kinematics / AtomTree.hh
kinematic_closure / KinematicPerturber.cc	kinematics / MoveMap.hh
kinematic_closure / KinematicPerturber.cc	pose / Pose.hh
kinematic_closure / KinematicPerturber.cc	conformation / ppo_torsion_bin.hh
kinematic_closure / KinematicPerturber.cc	scoring / Ramachandran.hh
kinematic_closure / KinematicPerturber.cc	scoring / Ramachandran2B.hh
kinematic_closure / KinematicPerturber.cc	conformation / Residue.hh
kinematic_closure / KinematicPerturber.cc	scoring / ScoringManager.hh
kinematic_closure / KinematicPerturber.hh	chemical / AA.hh
kinematic_closure / KinematicPerturber.hh	kinematics / MoveMap.fwd.hh
kinematic_closure / KinematicPerturber.hh	pose / Pose.fwd.hh
kinematic_closure / KinematicPerturber.hh	conformation / ppo_torsion_bin.hh
kinematic_closure / KinematicPerturber.hh	scoring / Ramachandran.fwd.hh
kinematic_closure / KinematicPerturber.hh	scoring / Ramachandran2B.fwd.hh
kinematic_closure / KinematicPerturber.hh	types.hh
kinematic_closure / KinematicWrapper.cc	kinematics / MoveMap.hh
kinematic_closure / KinematicWrapper.cc	types.hh
kinematic_closure / KinematicWrapper.hh	kinematics / MoveMap.fwd.hh
kinematic_closure / KinematicWrapper.hh	pose / Pose.fwd.hh
kinematic_closure / KinematicWrapper.hh	types.hh
ccd / LoopClosure.cc	fragment / BBTorsionSRFD.hh
ccd / LoopClosure.cc	fragment / FragData.hh
ccd / LoopClosure.cc	fragment / FragSet.hh
ccd / LoopClosure.cc	fragment / Frame.hh
ccd / LoopClosure.cc	kinematics / MoveMap.hh
ccd / LoopClosure.cc	pose / Pose.hh
ccd / LoopClosure.cc	scoring / ScoreFunction.hh
ccd / LoopClosure.hh	fragment / FragSet.fwd.hh
ccd / LoopClosure.hh	fragment / Frame.hh
ccd / LoopClosure.hh	kinematics / MoveMap.fwd.hh
ccd / LoopClosure.hh	pose / Pose.fwd.hh
ccd / LoopClosure.hh	scoring / ScoreFunction.fwd.hh
ccd / LoopClosure.hh	types.hh
ccd / RamaCheck.cc	pose / Pose.hh
ccd / RamaCheck.cc	scoring / Ramachandran.hh
ccd / RamaCheck.cc	scoring / Ramachandran2B.hh
ccd / RamaCheck.cc	conformation / Residue.hh
ccd / RamaCheck.cc	scoring / ScoringManager.hh
ccd / RamaCheck.cc	id / TorsionID.hh
ccd / RamaCheck.hh	pose / Pose.fwd.hh
ccd / RamaCheck.hh	scoring / Ramachandran.fwd.hh
ccd / RamaCheck.hh	scoring / Ramachandran2B.fwd.hh
ccd / RamaCheck.hh	id / TorsionID.fwd.hh
ccd / RamaCheck.hh	types.hh
ccd / ShortLoopClosure.cc	pose / annotated_sequence.hh
ccd / ShortLoopClosure.cc	chemical / ChemicalManager.hh
ccd / ShortLoopClosure.cc	kinematics / FoldTree.hh
ccd / ShortLoopClosure.cc	fragment / FragSet.hh
ccd / ShortLoopClosure.cc	fragment / Frame.hh
ccd / ShortLoopClosure.cc	fragment / FrameList.hh
ccd / ShortLoopClosure.cc	kinematics / MoveMap.hh
ccd / ShortLoopClosure.cc	pose / Pose.hh
ccd / ShortLoopClosure.cc	scoring / ScoreFunction.hh
ccd / ShortLoopClosure.cc	scoring / ScoreType.hh
ccd / SlidingWindowLoopClosure.cc	fragment / BBTorsionSRFD.hh
ccd / SlidingWindowLoopClosure.cc	scoring / Energies.hh
ccd / SlidingWindowLoopClosure.cc	pose / extra_pose_info_util.hh
ccd / SlidingWindowLoopClosure.cc	kinematics / FoldTree.hh
ccd / SlidingWindowLoopClosure.cc	fragment / FragCache.hh
ccd / SlidingWindowLoopClosure.cc	fragment / FragData.hh
ccd / SlidingWindowLoopClosure.cc	fragment / FragSet.hh
ccd / SlidingWindowLoopClosure.cc	fragment / Frame.hh
ccd / SlidingWindowLoopClosure.cc	fragment / FrameIterator.hh
ccd / SlidingWindowLoopClosure.cc	fragment / FrameIteratorWorker_.hh
ccd / SlidingWindowLoopClosure.cc	fragment / FrameList.hh
ccd / SlidingWindowLoopClosure.cc	kinematics / MoveMap.hh
ccd / SlidingWindowLoopClosure.cc	pose / Pose.hh
ccd / SlidingWindowLoopClosure.cc	scoring / rms_util.hh
ccd / SlidingWindowLoopClosure.cc	scoring / ScoreFunction.hh
ccd / SlidingWindowLoopClosure.cc	scoring / ScoreFunctionFactory.hh
ccd / SlidingWindowLoopClosure.cc	fragment / SecondaryStructure.hh
ccd / SlidingWindowLoopClosure.cc	io / silent / SilentFileData.hh
ccd / SlidingWindowLoopClosure.cc	io / silent / SilentFileOptions.hh
ccd / SlidingWindowLoopClosure.cc	io / silent / SilentStruct.hh
ccd / SlidingWindowLoopClosure.cc	io / silent / SilentStructFactory.hh
ccd / SlidingWindowLoopClosure.cc	pose / util.hh
ccd / SlidingWindowLoopClosure.hh	fragment / FragID.hh
ccd / SlidingWindowLoopClosure.hh	fragment / FragSet.fwd.hh
ccd / SlidingWindowLoopClosure.hh	kinematics / MoveMap.fwd.hh
ccd / SlidingWindowLoopClosure.hh	fragment / OrderedFragSet.hh
ccd / SlidingWindowLoopClosure.hh	pose / Pose.fwd.hh
ccd / SlidingWindowLoopClosure.hh	scoring / ScoreFunction.hh
ccd / SlidingWindowLoopClosure.hh	fragment / SecondaryStructure.hh
ccd / SlidingWindowLoopClosure.hh	types.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	fragment / BBTorsionSRFD.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	kinematics / FoldTree.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	fragment / FragData.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	fragment / FragSet.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	fragment / Frame.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	fragment / FrameList.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	kinematics / MoveMap.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	pose / Pose.hh
ccd / WidthFirstSlidingWindowLoopClosure.cc	scoring / ScoreFunction.hh
ccd / WidthFirstSlidingWindowLoopClosure.hh	fragment / FragSet.fwd.hh
ccd / WidthFirstSlidingWindowLoopClosure.hh	kinematics / MoveMap.fwd.hh
ccd / WidthFirstSlidingWindowLoopClosure.hh	fragment / OrderedFragSet.hh
ccd / WidthFirstSlidingWindowLoopClosure.hh	pose / Pose.fwd.hh
ccd / WidthFirstSlidingWindowLoopClosure.hh	scoring / ScoreFunction.fwd.hh
ccd / WidthFirstSlidingWindowLoopClosure.hh	types.hh