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2021.16
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src
protocols
matdes
matdes → core Relation
File in src/protocols/matdes
Includes file in src/core
BuildingBlockInterfaceOperation.cc
pose
/
chains_util.hh
BuildingBlockInterfaceOperation.cc
scoring
/
Energies.hh
BuildingBlockInterfaceOperation.cc
scoring
/
EnergyMap.hh
BuildingBlockInterfaceOperation.cc
import_pose
/
import_pose.hh
BuildingBlockInterfaceOperation.cc
pack
/
task
/
PackerTask.hh
BuildingBlockInterfaceOperation.cc
pose
/
PDBInfo.hh
BuildingBlockInterfaceOperation.cc
pose
/
Pose.hh
BuildingBlockInterfaceOperation.cc
conformation
/
Residue.hh
BuildingBlockInterfaceOperation.cc
chemical
/
ResidueConnection.hh
BuildingBlockInterfaceOperation.cc
scoring
/
ScoreFunction.hh
BuildingBlockInterfaceOperation.cc
scoring
/
ScoreFunctionFactory.hh
BuildingBlockInterfaceOperation.cc
conformation
/
symmetry
/
SymmetricConformation.hh
BuildingBlockInterfaceOperation.cc
conformation
/
symmetry
/
SymmetryInfo.hh
BuildingBlockInterfaceOperation.cc
pack
/
task
/
operation
/
task_op_schemas.hh
BuildingBlockInterfaceOperation.cc
pose
/
symmetry
/
util.hh
BuildingBlockInterfaceOperation.hh
pose
/
Pose.fwd.hh
BuildingBlockInterfaceOperation.hh
pack
/
task
/
operation
/
TaskOperation.hh
BuildingBlockInterfaceOperation.hh
types.hh
BuildingBlockInterfaceOperationCreator.hh
pack
/
task
/
operation
/
TaskOperationCreator.hh
ClashCheckFilter.cc
id
/
AtomID_Map.hh
ClashCheckFilter.cc
chemical
/
ChemicalManager.hh
ClashCheckFilter.cc
conformation
/
Conformation.hh
ClashCheckFilter.cc
kinematics
/
FoldTree.hh
ClashCheckFilter.cc
pack
/
task
/
PackerTask.hh
ClashCheckFilter.cc
pose
/
PDBInfo.hh
ClashCheckFilter.cc
pose
/
Pose.hh
ClashCheckFilter.cc
conformation
/
Residue.hh
ClashCheckFilter.cc
chemical
/
ResidueConnection.hh
ClashCheckFilter.cc
scoring
/
sasa.hh
ClashCheckFilter.cc
conformation
/
symmetry
/
SymmetryInfo.hh
ClashCheckFilter.cc
pack
/
task
/
TaskFactory.hh
ClashCheckFilter.cc
types.hh
ClashCheckFilter.cc
pose
/
symmetry
/
util.hh
ClashCheckFilter.cc
pose
/
util.hh
ClashCheckFilter.hh
pose
/
Pose.fwd.hh
ClashCheckFilter.hh
pack
/
task
/
TaskFactory.fwd.hh
ClashCheckFilter.hh
pack
/
task
/
operation
/
TaskOperation.fwd.hh
ExtractSubposeMover.cc
scoring
/
Energies.hh
ExtractSubposeMover.cc
scoring
/
EnergyMap.hh
ExtractSubposeMover.cc
pack
/
task
/
PackerTask.hh
ExtractSubposeMover.cc
pose
/
Pose.hh
ExtractSubposeMover.cc
conformation
/
Residue.hh
ExtractSubposeMover.cc
chemical
/
ResidueConnection.hh
ExtractSubposeMover.cc
io
/
silent
/
ScoreFileSilentStruct.hh
ExtractSubposeMover.cc
scoring
/
ScoreFunction.hh
ExtractSubposeMover.cc
scoring
/
ScoreFunctionFactory.hh
ExtractSubposeMover.cc
io
/
silent
/
SilentFileData.hh
ExtractSubposeMover.cc
conformation
/
symmetry
/
SymmetryInfo.hh
ExtractSubposeMover.cc
io
/
util.hh
ExtractSubposeMover.cc
pose
/
symmetry
/
util.hh
ExtractSubposeMover.hh
pose
/
Pose.fwd.hh
ExtractSubposeMover.hh
scoring
/
ScoreFunction.hh
ExtractSubposeMover.hh
pack
/
task
/
TaskFactory.hh
ExtractSubposeMover.hh
pack
/
task
/
operation
/
TaskOperation.hh
ExtractSubposeMover.hh
types.hh
GetRBDOFValues.cc
conformation
/
Conformation.hh
GetRBDOFValues.cc
kinematics
/
Jump.hh
GetRBDOFValues.cc
pack
/
task
/
PackerTask.hh
GetRBDOFValues.cc
pose
/
Pose.hh
GetRBDOFValues.cc
chemical
/
ResidueConnection.hh
GetRBDOFValues.cc
pack
/
task
/
TaskFactory.hh
GetRBDOFValues.cc
types.hh
GetRBDOFValues.cc
pose
/
symmetry
/
util.hh
GetRBDOFValues.hh
pose
/
Pose.fwd.hh
GetRBDOFValues.hh
pack
/
task
/
TaskFactory.fwd.hh
GetRBDOFValues.hh
pack
/
task
/
operation
/
TaskOperation.fwd.hh
InterfacePackingFilter.cc
id
/
AtomID_Map.hh
InterfacePackingFilter.cc
scoring
/
packing
/
compute_holes_score.hh
InterfacePackingFilter.cc
kinematics
/
FoldTree.hh
InterfacePackingFilter.cc
scoring
/
packing
/
HolesParams.hh
InterfacePackingFilter.cc
pose
/
PDBInfo.hh
InterfacePackingFilter.cc
pose
/
Pose.hh
InterfacePackingFilter.cc
conformation
/
Residue.hh
InterfacePackingFilter.cc
chemical
/
ResidueConnection.hh
InterfacePackingFilter.cc
conformation
/
symmetry
/
SymmetryInfo.hh
InterfacePackingFilter.cc
io
/
util.hh
InterfacePackingFilter.cc
pose
/
symmetry
/
util.hh
InterfacePackingFilter.cc
conformation
/
symmetry
/
util.hh
InterfacePackingFilter.hh
pose
/
Pose.fwd.hh
MatDesGreedyOptMutationMover.cc
pose
/
datacache
/
CacheableDataType.hh
MatDesGreedyOptMutationMover.cc
conformation
/
Conformation.hh
MatDesGreedyOptMutationMover.cc
import_pose
/
import_pose.hh
MatDesGreedyOptMutationMover.cc
pack
/
pack_rotamers.hh
MatDesGreedyOptMutationMover.cc
pack
/
task
/
PackerTask.hh
MatDesGreedyOptMutationMover.cc
pose
/
PDBInfo.hh
MatDesGreedyOptMutationMover.cc
pose
/
Pose.hh
MatDesGreedyOptMutationMover.cc
conformation
/
Residue.hh
MatDesGreedyOptMutationMover.cc
chemical
/
ResidueType.fwd.hh
MatDesGreedyOptMutationMover.cc
chemical
/
ResidueType.hh
MatDesGreedyOptMutationMover.cc
scoring
/
ScoreFunction.hh
MatDesGreedyOptMutationMover.cc
pack
/
task
/
TaskFactory.hh
MatDesGreedyOptMutationMover.cc
pose
/
symmetry
/
util.hh
MatDesGreedyOptMutationMover.hh
pack
/
task
/
PackerTask.fwd.hh
MatDesGreedyOptMutationMover.hh
pose
/
Pose.hh
MatDesGreedyOptMutationMover.hh
scoring
/
ScoreFunction.fwd.hh
MatDesGreedyOptMutationMover.hh
pack
/
task
/
TaskFactory.fwd.hh
MatDesGreedyOptMutationMover.hh
types.hh
MatDesPointMutationCalculator.cc
pose
/
datacache
/
CacheableDataType.hh
MatDesPointMutationCalculator.cc
conformation
/
Conformation.hh
MatDesPointMutationCalculator.cc
pack
/
make_symmetric_task.hh
MatDesPointMutationCalculator.cc
pack
/
task
/
operation
/
OperateOnCertainResidues.hh
MatDesPointMutationCalculator.cc
pack
/
pack_rotamers.hh
MatDesPointMutationCalculator.cc
pack
/
task
/
PackerTask.hh
MatDesPointMutationCalculator.cc
pose
/
PDBInfo.hh
MatDesPointMutationCalculator.cc
pose
/
Pose.hh
MatDesPointMutationCalculator.cc
conformation
/
Residue.hh
MatDesPointMutationCalculator.cc
chemical
/
ResidueType.fwd.hh
MatDesPointMutationCalculator.cc
chemical
/
ResidueType.hh
MatDesPointMutationCalculator.cc
pack
/
task
/
operation
/
ResLvlTaskOperations.hh
MatDesPointMutationCalculator.cc
scoring
/
ScoreFunction.hh
MatDesPointMutationCalculator.cc
conformation
/
symmetry
/
SymmetryInfo.hh
MatDesPointMutationCalculator.cc
pack
/
task
/
TaskFactory.hh
MatDesPointMutationCalculator.cc
pack
/
task
/
operation
/
TaskOperations.hh
MatDesPointMutationCalculator.cc
pose
/
util.hh
MatDesPointMutationCalculator.cc
pose
/
symmetry
/
util.hh
MatDesPointMutationCalculator.hh
chemical
/
AA.hh
MatDesPointMutationCalculator.hh
pack
/
task
/
PackerTask.fwd.hh
MatDesPointMutationCalculator.hh
pose
/
Pose.fwd.hh
MatDesPointMutationCalculator.hh
scoring
/
ScoreFunction.fwd.hh
MatDesPointMutationCalculator.hh
pack
/
task
/
TaskFactory.fwd.hh
MatDesPointMutationCalculator.hh
types.hh
MotifHitsRotamersOperation.cc
pack
/
task
/
PackerTask.hh
MotifHitsRotamersOperation.cc
pose
/
Pose.hh
MotifHitsRotamersOperation.cc
conformation
/
Residue.hh
MotifHitsRotamersOperation.cc
pack
/
rotamer_set
/
RotamerSet.hh
MotifHitsRotamersOperation.cc
conformation
/
symmetry
/
SymmetryInfo.hh
MotifHitsRotamersOperation.cc
pose
/
symmetry
/
util.hh
MotifHitsRotamersOperation.hh
scoring
/
motif
/
motif_hash_stuff.hh
MotifHitsRotamersOperation.hh
conformation
/
Residue.fwd.hh
MotifHitsRotamersOperation.hh
pack
/
rotamer_set
/
RotamerSet.fwd.hh
MotifHitsRotamersOperation.hh
pack
/
rotamer_set
/
RotamerSetOperation.hh
MotifHitsRotamersOperation.hh
scoring
/
ScoreFunction.fwd.hh
OligomericAverageDegreeFilter.cc
conformation
/
Conformation.hh
OligomericAverageDegreeFilter.cc
kinematics
/
FoldTree.hh
OligomericAverageDegreeFilter.cc
pack
/
task
/
PackerTask.hh
OligomericAverageDegreeFilter.cc
pose
/
PDBInfo.hh
OligomericAverageDegreeFilter.cc
pose
/
Pose.hh
OligomericAverageDegreeFilter.cc
conformation
/
Residue.hh
OligomericAverageDegreeFilter.cc
chemical
/
ResidueConnection.hh
OligomericAverageDegreeFilter.cc
conformation
/
symmetry
/
SymmetryInfo.hh
OligomericAverageDegreeFilter.cc
pack
/
task
/
TaskFactory.hh
OligomericAverageDegreeFilter.cc
types.hh
OligomericAverageDegreeFilter.cc
pose
/
symmetry
/
util.hh
OligomericAverageDegreeFilter.hh
pose
/
Pose.fwd.hh
OligomericAverageDegreeFilter.hh
pack
/
task
/
TaskFactory.fwd.hh
OligomericAverageDegreeFilter.hh
pack
/
task
/
operation
/
TaskOperation.fwd.hh
SchemePlaceMotifsMover.cc
pose
/
datacache
/
CacheableDataType.hh
SchemePlaceMotifsMover.cc
scoring
/
motif
/
motif_hash_stuff.hh
SchemePlaceMotifsMover.cc
pack
/
task
/
PackerTask.hh
SchemePlaceMotifsMover.cc
scoring
/
ScoreFunction.hh
SchemePlaceMotifsMover.cc
scoring
/
ScoreFunctionFactory.hh
SchemePlaceMotifsMover.cc
pack
/
task
/
TaskFactory.hh
SchemePlaceMotifsMover.cc
pose
/
symmetry
/
util.hh
SchemePlaceMotifsMover.cc
pose
/
util.hh
SchemePlaceMotifsMover.hh
pack
/
task
/
PackerTask.fwd.hh
SchemePlaceMotifsMover.hh
pose
/
Pose.fwd.hh
SchemePlaceMotifsMover.hh
scoring
/
ScoreFunction.fwd.hh
SchemePlaceMotifsMover.hh
pack
/
task
/
TaskFactory.fwd.hh
SymDofMover.cc
id
/
AtomID_Map.hh
SymDofMover.cc
import_pose
/
import_pose.hh
SymDofMover.cc
kinematics
/
Jump.hh
SymDofMover.cc
pose
/
PDBInfo.hh
SymDofMover.cc
pose
/
Pose.hh
SymDofMover.cc
chemical
/
ResidueConnection.hh
SymDofMover.cc
scoring
/
ScoreFunction.hh
SymDofMover.cc
pose
/
subpose_manipulation_util.hh
SymDofMover.cc
conformation
/
symmetry
/
SymDof.hh
SymDofMover.cc
conformation
/
symmetry
/
SymmData.hh
SymDofMover.cc
conformation
/
symmetry
/
SymmetricConformation.hh
SymDofMover.cc
conformation
/
symmetry
/
SymmetryInfo.hh
SymDofMover.cc
conformation
/
symmetry
/
util.hh
SymDofMover.cc
pose
/
symmetry
/
util.hh
SymDofMover.cc
pose
/
util.hh
SymDofMover.cc
conformation
/
symmetry
/
VirtualCoordinate.hh
SymDofMover.hh
pack
/
task
/
PackerTask.fwd.hh
SymDofMover.hh
pose
/
Pose.fwd.hh
SymDofMover.hh
scoring
/
ScoreFunction.fwd.hh
SymDofMoverSampler.hh
types.hh
SymUnsatHbondFilter.cc
id
/
AtomID_Map.hh
SymUnsatHbondFilter.cc
pose
/
metrics
/
CalculatorFactory.hh
SymUnsatHbondFilter.cc
import_pose
/
import_pose.hh
SymUnsatHbondFilter.cc
pose
/
PDBInfo.hh
SymUnsatHbondFilter.cc
pose
/
Pose.hh
SymUnsatHbondFilter.cc
pose
/
metrics
/
PoseMetricCalculatorBase.hh
SymUnsatHbondFilter.cc
chemical
/
ResidueConnection.hh
SymUnsatHbondFilter.cc
scoring
/
ScoreFunction.hh
SymUnsatHbondFilter.cc
conformation
/
symmetry
/
SymDof.hh
SymUnsatHbondFilter.cc
conformation
/
symmetry
/
SymmetricConformation.hh
SymUnsatHbondFilter.cc
conformation
/
symmetry
/
SymmetryInfo.hh
SymUnsatHbondFilter.cc
conformation
/
symmetry
/
util.hh
SymUnsatHbondFilter.cc
pose
/
symmetry
/
util.hh
SymUnsatHbondFilter.hh
pose
/
Pose.hh
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