minimization_packing → core Relation

File in src/protocols/minimization_packing	Includes file in src/core
BoltzmannRotamerMover.cc	scoring / Energies.hh
BoltzmannRotamerMover.cc	pack / packer_neighbors.hh
BoltzmannRotamerMover.cc	pack / task / PackerTask.hh
BoltzmannRotamerMover.cc	pose / Pose.hh
BoltzmannRotamerMover.cc	conformation / Residue.hh
BoltzmannRotamerMover.cc	pack / rotamer_set / RotamerSet.hh
BoltzmannRotamerMover.cc	pack / rotamer_set / RotamerSetFactory.hh
BoltzmannRotamerMover.cc	pack / rotamer_set / RotamerSets.hh
BoltzmannRotamerMover.cc	scoring / ScoreFunction.hh
BoltzmannRotamerMover.cc	pack / task / TaskFactory.hh
BoltzmannRotamerMover.hh	pack / task / PackerTask.fwd.hh
BoltzmannRotamerMover.hh	pose / Pose.fwd.hh
BoltzmannRotamerMover.hh	scoring / ScoreFunction.fwd.hh
BoltzmannRotamerMover.hh	pack / task / TaskFactory.fwd.hh
BoltzmannRotamerMover.hh	types.hh
DisulfideOptimizationMover.cc	chemical / AA.hh
DisulfideOptimizationMover.cc	kinematics / MoveMap.hh
DisulfideOptimizationMover.cc	pack / pack_rotamers.hh
DisulfideOptimizationMover.cc	pack / task / PackerTask.hh
DisulfideOptimizationMover.cc	pose / Pose.hh
DisulfideOptimizationMover.cc	select / residue_selector / ResidueSelector.hh
DisulfideOptimizationMover.cc	chemical / ResidueType.hh
DisulfideOptimizationMover.cc	scoring / ScoreFunction.hh
DisulfideOptimizationMover.cc	scoring / ScoreFunctionFactory.hh
DisulfideOptimizationMover.cc	pack / task / TaskFactory.hh
DisulfideOptimizationMover.cc	conformation / util.hh
DisulfideOptimizationMover.hh	pose / Pose.fwd.hh
DisulfideOptimizationMover.hh	select / residue_selector / ResidueSelector.fwd.hh
DisulfideOptimizationMover.hh	scoring / ScoreFunction.fwd.hh
GreenPacker.cc	chemical / AtomICoor.hh
GreenPacker.cc	scoring / Energies.hh
GreenPacker.cc	scoring / EnergyMap.hh
GreenPacker.cc	pack / interaction_graph / InteractionGraphFactory.hh
GreenPacker.cc	scoring / methods / LongRangeTwoBodyEnergy.hh
GreenPacker.cc	scoring / LREnergyContainer.hh
GreenPacker.cc	pack / pack_rotamers.hh
GreenPacker.cc	pack / packer_neighbors.hh
GreenPacker.cc	pack / task / PackerTask.hh
GreenPacker.cc	pose / Pose.hh
GreenPacker.cc	pack / interaction_graph / PrecomputedPairEnergiesInteractionGraph.hh
GreenPacker.cc	conformation / Residue.hh
GreenPacker.cc	chemical / ResidueType.hh
GreenPacker.cc	pack / rotamer_set / RotamerSet.hh
GreenPacker.cc	pack / rotamer_set / RotamerSets.hh
GreenPacker.cc	scoring / ScoreFunction.hh
GreenPacker.cc	pack / task / TaskFactory.hh
GreenPacker.hh	chemical / AA.hh
GreenPacker.hh	scoring / EnergyMap.fwd.hh
GreenPacker.hh	scoring / methods / LongRangeTwoBodyEnergy.fwd.hh
GreenPacker.hh	pack / task / PackerTask.fwd.hh
GreenPacker.hh	pose / Pose.fwd.hh
GreenPacker.hh	pack / interaction_graph / PrecomputedPairEnergiesInteractionGraph.fwd.hh
GreenPacker.hh	conformation / Residue.fwd.hh
GreenPacker.hh	chemical / ResidueType.fwd.hh
GreenPacker.hh	pack / rotamer_set / RotamerSets.fwd.hh
GreenPacker.hh	scoring / ScoreFunction.fwd.hh
GreenPacker.hh	scoring / ScoreType.hh
GreenPacker.hh	pack / task / TaskFactory.fwd.hh
GreenPacker.hh	types.hh
MinMover.cc	optimization / AtomTreeMinimizer.hh
MinMover.cc	optimization / CartesianMinimizer.hh
MinMover.cc	select / jump_selector / JumpIndexSelector.hh
MinMover.cc	optimization / MinimizerOptions.hh
MinMover.cc	kinematics / MoveMap.hh
MinMover.cc	select / movemap / MoveMapFactory.hh
MinMover.cc	pack / task / PackerTask.hh
MinMover.cc	pose / Pose.hh
MinMover.cc	conformation / Residue.hh
MinMover.cc	scoring / ScoreFunction.hh
MinMover.cc	scoring / ScoreFunctionFactory.hh
MinMover.cc	optimization / symmetry / SymAtomTreeMinimizer.hh
MinMover.cc	pack / task / TaskFactory.hh
MinMover.cc	pack / task / operation / TaskOperation.hh
MinMover.cc	id / TorsionID.hh
MinMover.cc	id / types.hh
MinMover.cc	select / movemap / util.hh
MinMover.cc	pose / symmetry / util.hh
MinMover.hh	optimization / MinimizerOptions.fwd.hh
MinMover.hh	kinematics / MoveMap.fwd.hh
MinMover.hh	select / movemap / MoveMapFactory.fwd.hh
MinMover.hh	pose / Pose.fwd.hh
MinMover.hh	scoring / ScoreFunction.fwd.hh
MinMover.hh	pack / task / TaskFactory.hh
MinMover.hh	id / types.hh
MinMover.hh	types.hh
MinPackMover.cc	pack / min_pack.hh
MinPackMover.cc	pack / task / PackerTask.hh
MinPackMover.cc	pose / Pose.hh
MinPackMover.cc	chemical / ResidueType.hh
MinPackMover.cc	scoring / ScoreFunction.hh
MinPackMover.cc	scoring / ScoreFunctionFactory.hh
MinPackMover.cc	pack / task / TaskFactory.hh
MinPackMover.hh	pack / task / PackerTask.fwd.hh
MinPackMover.hh	pose / Pose.fwd.hh
MinPackMover.hh	scoring / ScoreFunction.fwd.hh
MinPackMover.hh	pack / task / TaskFactory.fwd.hh
PackRotamersMover.cc	pack / interaction_graph / AnnealableGraphBase.hh
PackRotamersMover.cc	pack / make_symmetric_task.hh
PackRotamersMover.cc	pack / pack_rotamers.hh
PackRotamersMover.cc	pack / task / PackerTask.hh
PackRotamersMover.cc	pose / PDBInfo.hh
PackRotamersMover.cc	pose / Pose.hh
PackRotamersMover.cc	conformation / Residue.hh
PackRotamersMover.cc	chemical / ResidueType.hh
PackRotamersMover.cc	pack / rotamer_set / RotamerSets.hh
PackRotamersMover.cc	pack / rotamer_set / RotamerSetsFactory.hh
PackRotamersMover.cc	scoring / ScoreFunction.hh
PackRotamersMover.cc	scoring / ScoreFunctionFactory.hh
PackRotamersMover.cc	conformation / symmetry / SymmetricConformation.hh
PackRotamersMover.cc	conformation / symmetry / SymmetryInfo.hh
PackRotamersMover.cc	pack / task / TaskFactory.hh
PackRotamersMover.cc	pose / symmetry / util.hh
PackRotamersMover.hh	pack / interaction_graph / AnnealableGraphBase.fwd.hh
PackRotamersMover.hh	pack / annealer / AnnealerObserver.fwd.hh
PackRotamersMover.hh	pack / task / PackerTask.fwd.hh
PackRotamersMover.hh	pose / Pose.fwd.hh
PackRotamersMover.hh	pack / rotamer_set / RotamerSets.fwd.hh
PackRotamersMover.hh	scoring / ScoreFunction.fwd.hh
PackRotamersMover.hh	pack / task / TaskFactory.fwd.hh
PackRotamersMover.hh	pack / task / operation / TaskOperation.fwd.hh
PackRotamersMover.hh	types.hh
PackRotamersMoverLazy.cc	pack / task / PackerTask.hh
PackRotamersMoverLazy.cc	pose / Pose.hh
PackRotamersMoverLazy.cc	scoring / ScoreFunction.hh
PackRotamersMoverLazy.cc	pack / task / operation / TaskOperation.fwd.hh
PackRotamersMoverLazy.hh	pack / task / PackerTask.fwd.hh
PackRotamersMoverLazy.hh	pose / Pose.fwd.hh
PackRotamersMoverLazy.hh	scoring / ScoreFunction.fwd.hh
PackRotamersMoverLazy.hh	pack / task / TaskFactory.fwd.hh
PackRotamersMoverLazy.hh	types.hh
PertMinMover.cc	id / AtomID.hh
PertMinMover.cc	optimization / CartesianMinimizer.hh
PertMinMover.cc	optimization / MinimizerOptions.hh
PertMinMover.cc	kinematics / MoveMap.hh
PertMinMover.cc	select / movemap / MoveMapFactory.hh
PertMinMover.cc	pose / Pose.hh
PertMinMover.cc	conformation / Residue.hh
PertMinMover.cc	select / residue_selector / ResidueSelector.hh
PertMinMover.cc	scoring / ScoreFunction.hh
PertMinMover.cc	scoring / ScoreFunctionFactory.hh
PertMinMover.hh	select / movemap / MoveMapFactory.fwd.hh
PertMinMover.hh	pose / Pose.fwd.hh
PertMinMover.hh	select / residue_selector / ResidueSelector.fwd.hh
PertMinMover.hh	scoring / ScoreFunction.fwd.hh
RepackSidechainsMover.cc	id / AtomID_Mask.fwd.hh
RepackSidechainsMover.cc	pack / pack_missing_sidechains.hh
RepackSidechainsMover.cc	pack / pack_rotamers.hh
RepackSidechainsMover.cc	pack / task / PackerTask.hh
RepackSidechainsMover.cc	pose / Pose.hh
RepackSidechainsMover.cc	scoring / ScoreFunction.hh
RepackSidechainsMover.cc	pack / task / TaskFactory.hh
RepackSidechainsMover.cc	pose / util.hh
RepackSidechainsMover.cc	pose / util.tmpl.hh
RepackSidechainsMover.hh	pose / Pose.fwd.hh
RepackSidechainsMover.hh	scoring / ScoreFunction.hh
RepackSidechainsMover.hh	types.hh
RotamerizeMover.cc	pack / interaction_graph / AnnealableGraphBase.hh
RotamerizeMover.cc	pack / pack_rotamers.hh
RotamerizeMover.cc	pack / task / PackerTask.hh
RotamerizeMover.cc	pose / PDBInfo.hh
RotamerizeMover.cc	pose / Pose.hh
RotamerizeMover.cc	conformation / Residue.hh
RotamerizeMover.cc	chemical / ResidueType.hh
RotamerizeMover.cc	pack / rotamer_set / RotamerSet.hh
RotamerizeMover.cc	pack / rotamer_set / RotamerSets.hh
RotamerizeMover.cc	scoring / ScoreFunction.hh
RotamerizeMover.cc	scoring / ScoreFunctionFactory.hh
RotamerizeMover.cc	pack / task / TaskFactory.hh
RotamerizeMover.cc	pack / task / operation / TaskOperation.hh
RotamerizeMover.hh	pack / task / PackerTask.fwd.hh
RotamerizeMover.hh	pose / Pose.fwd.hh
RotamerizeMover.hh	pack / rotamer_set / RotamerSets.fwd.hh
RotamerizeMover.hh	pack / task / TaskFactory.fwd.hh
RotamerizeMover.hh	types.hh
RotamerTrialsMinMover.cc	scoring / Energies.hh
RotamerTrialsMinMover.cc	pack / task / PackerTask.hh
RotamerTrialsMinMover.cc	pose / Pose.hh
RotamerTrialsMinMover.cc	pack / rtmin.hh
RotamerTrialsMinMover.cc	scoring / ScoreFunction.hh
RotamerTrialsMinMover.cc	scoring / ScoreFunctionFactory.hh
RotamerTrialsMinMover.cc	pack / task / TaskFactory.hh
RotamerTrialsMinMover.hh	pack / task / PackerTask.fwd.hh
RotamerTrialsMinMover.hh	pose / Pose.fwd.hh
RotamerTrialsMinMover.hh	scoring / ScoreFunction.fwd.hh
RotamerTrialsMinMover.hh	pack / task / TaskFactory.fwd.hh
RotamerTrialsMinMover.hh	types.hh
RotamerTrialsMover.cc	scoring / Energies.hh
RotamerTrialsMover.cc	pack / make_symmetric_task.hh
RotamerTrialsMover.cc	pack / task / PackerTask.hh
RotamerTrialsMover.cc	pose / Pose.hh
RotamerTrialsMover.cc	pack / rotamer_trials.hh
RotamerTrialsMover.cc	scoring / ScoreFunction.hh
RotamerTrialsMover.cc	pack / task / TaskFactory.hh
RotamerTrialsMover.cc	pose / symmetry / util.hh
RotamerTrialsMover.hh	pack / task / PackerTask.fwd.hh
RotamerTrialsMover.hh	pose / Pose.fwd.hh
RotamerTrialsMover.hh	scoring / ScoreFunction.fwd.hh
RotamerTrialsMover.hh	pack / task / TaskFactory.fwd.hh
RotamerTrialsMover.hh	types.hh
SaneMinMover.cc	optimization / AtomTreeMinimizer.hh
SaneMinMover.cc	optimization / CartesianMinimizer.hh
SaneMinMover.cc	optimization / MinimizerOptions.hh
SaneMinMover.cc	kinematics / MoveMap.hh
SaneMinMover.cc	pose / Pose.fwd.hh
SaneMinMover.cc	scoring / ScoreFunction.hh
SaneMinMover.cc	scoring / ScoreFunctionFactory.hh
SaneMinMover.hh	optimization / MinimizerOptions.fwd.hh
SaneMinMover.hh	kinematics / MoveMap.fwd.hh
SaneMinMover.hh	pose / Pose.fwd.hh
SaneMinMover.hh	scoring / ScoreFunction.fwd.hh
SaneMinMover.hh	types.hh
SetReturningPackRotamersMover.cc	pack / task / PackerTask.hh
SetReturningPackRotamersMover.cc	pose / Pose.hh
SetReturningPackRotamersMover.cc	scoring / ScoreFunction.hh
SetReturningPackRotamersMover.cc	scoring / ScoreFunctionFactory.hh
SetReturningPackRotamersMover.cc	pack / task / TaskFactory.hh
SetReturningPackRotamersMover.hh	pack / task / PackerTask.fwd.hh
SetReturningPackRotamersMover.hh	pose / Pose.fwd.hh
SetReturningPackRotamersMover.hh	scoring / ScoreFunction.fwd.hh
SetReturningPackRotamersMover.hh	types.hh
symmetry / SymRotamerTrialsMover.cc	scoring / Energies.hh
symmetry / SymRotamerTrialsMover.cc	pack / task / PackerTask.hh
symmetry / SymRotamerTrialsMover.cc	pose / PDBInfo.hh
symmetry / SymRotamerTrialsMover.cc	pose / Pose.hh
symmetry / SymRotamerTrialsMover.cc	pack / rotamer_trials.hh
symmetry / SymRotamerTrialsMover.cc	scoring / ScoreFunction.hh
symmetry / SymRotamerTrialsMover.cc	conformation / symmetry / SymmetricConformation.hh
symmetry / SymRotamerTrialsMover.cc	conformation / symmetry / SymmetryInfo.fwd.hh
symmetry / SymRotamerTrialsMover.cc	conformation / symmetry / SymmetryInfo.hh
symmetry / SymRotamerTrialsMover.cc	pack / task / TaskFactory.hh
symmetry / SymRotamerTrialsMover.cc	pose / symmetry / util.hh
symmetry / SymRotamerTrialsMover.hh	conformation / symmetry / SymmetricConformation.fwd.hh
symmetry / SymRotamerTrialsMover.hh	conformation / symmetry / SymmetryInfo.fwd.hh
TaskAwareMinMover.cc	kinematics / MoveMap.hh
TaskAwareMinMover.cc	pack / task / PackerTask.hh
TaskAwareMinMover.cc	pose / Pose.hh
TaskAwareMinMover.cc	scoring / ScoreFunction.hh
TaskAwareMinMover.cc	pack / task / TaskFactory.hh
TaskAwareMinMover.cc	types.hh
TaskAwareMinMover.hh	kinematics / MoveMap.fwd.hh
TaskAwareMinMover.hh	pack / task / PackerTask.fwd.hh
TaskAwareMinMover.hh	pose / Pose.fwd.hh
TaskAwareMinMover.hh	pack / task / TaskFactory.fwd.hh
symmetry / TaskAwareSymMinMover.cc	kinematics / MoveMap.hh
symmetry / TaskAwareSymMinMover.cc	pack / task / PackerTask.hh
symmetry / TaskAwareSymMinMover.cc	pose / Pose.hh
symmetry / TaskAwareSymMinMover.cc	chemical / ResidueConnection.hh
symmetry / TaskAwareSymMinMover.cc	scoring / ScoreFunction.hh
symmetry / TaskAwareSymMinMover.cc	conformation / symmetry / SymmetryInfo.hh
symmetry / TaskAwareSymMinMover.cc	pack / task / TaskFactory.hh
symmetry / TaskAwareSymMinMover.cc	pose / symmetry / util.hh
symmetry / TaskAwareSymMinMover.cc	pose / util.hh
symmetry / TaskAwareSymMinMover.hh	pose / Pose.fwd.hh
symmetry / TaskAwareSymMinMover.hh	scoring / ScoreFunction.fwd.hh
symmetry / TaskAwareSymMinMover.hh	pack / task / TaskFactory.hh
symmetry / TaskAwareSymMinMover.hh	types.hh