- i -

• IdealBondLengthSets : core::chemical::ChemicalManager
• IdentityEvent : core::conformation::Conformation
• IDMoverSetMap : protocols::abinitio::abscript::AbscriptMover
• ImportTagName : protocols::rosetta_scripts::RosettaScriptsParser
• Index : protocols::mean_field::jagged_array< T, A >
• index_mask_pair : protocols::match::Bool3DGrid
• index_type : protocols::mean_field::jagged_array< T, A >
• IndexArray : protocols::indexed_structure_store::search::StructureData
• IndexList : core::fragment::CacheWrapper< T, XCacheUnit >
• IndexVector : protocols::evaluation::PCA
• InnerCycleList : protocols::loops::loop_mover::refine::LoopRefineInnerCycleContainer
• InnerHBondMap : protocols::sparta::PDB
• InnerIterator : core::fragment::MinimalFragSetIterator_ , core::fragment::OrderedFragSetIterator_
• InPlaceIntListOP : core::pack::interaction_graph::DoubleLazyInteractionGraph
• InteractionGraphBaseCOP : protocols::pack_daemon::PackDaemon
• InteractionGraphBaseOP : protocols::pack_daemon::PackDaemon
• InternalMatrix : core::chemical::VDDistanceMatrix
• InternalVector : core::chemical::VDDistanceMatrix
• Interval : protocols::fldsgn::BluePrintBDR , protocols::forge::components::BDR , protocols::forge::components::VarLengthBuild , protocols::forge::remodel::RemodelMover
• Interval2Interval : protocols::forge::build::BuildManager
• Interval2MoveMap : protocols::forge::build::BuildManager
• Interval2Positions : protocols::forge::build::BuildManager
• intint : protocols::sic_dock::scores::MotifHashRigidScore
• IntraClusterIterator : protocols::toolbox::ClusterBase
• invrots_node_ptrs_pair : protocols::toolbox::match_enzdes_util::InvrotTreeNode
• iterator : core::conformation::Conformation , core::kinematics::FoldTree , core::optimization::MinimizerMap , core::pack::interaction_graph::MultiplexedAnnealableGraph , core::pose::Pose , core::scoring::constraints::ResidueConstraints , core::scoring::dssp::StrandPairingSet , core::scoring::EMapVector , protocols::abinitio::abscript::ResidueChunkSelection , protocols::constraint_generator::ConstraintsMap , protocols::filters::CompoundFilter , protocols::hotspot_hashing::HotspotStubSet , protocols::jumping::JumpSelector , protocols::jumping::JumpSetup , protocols::jumping::ResiduePairJumpSetup , protocols::loops::Loops , protocols::mean_field::jagged_array< T, A >
• Iterator : protocols::mean_field::jagged_array< T, A >
• iterator : protocols::noesy_assign::CrossPeak , protocols::noesy_assign::CrossPeakList , protocols::protein_interface_design::movers::PlacementAuctionMover , protocols::rosetta_scripts::ParsedProtocol , protocols::splice::ResidueBBDofs , protocols::wum::SilentStructStore , protocols::wum::WorkUnitManager , protocols::wum::WorkUnitQueue
• iterator_category : core::io::silent::SilentFileData::const_iterator , core::io::silent::SilentFileData::iterator , core::kinematics::RT , core::kinematics::tree::Atom , protocols::toolbox::OP_const_iterator< const_iterator, SomeOP >