- t -

TableEnergy : core::scoring
TableProbability : core::scoring
TabooSamplingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
TabooSamplingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
TagCOP : protocols::filters , protocols::splice
TagCOPs : protocols::rosetta_scripts
TagDefinitionCOP : protocols::stepwise::screener
TagDefinitionOP : protocols::stepwise::screener
TagList : protocols::multistage_rosetta_scripts
TagListCOP : protocols::multistage_rosetta_scripts
TagListOP : protocols::multistage_rosetta_scripts
TagManagerCOP : protocols::multistage_rosetta_scripts
TagManagerOP : protocols::multistage_rosetta_scripts
TagMap : protocols::multistage_rosetta_scripts
TagMapCOP : protocols::multistage_rosetta_scripts
TagMapOP : protocols::multistage_rosetta_scripts
TagScoreMap : core::import_pose::atom_tree_diffs
TagScorePair : core::import_pose::atom_tree_diffs
TailSegmentMoverCOP : protocols::splice
TailSegmentMoverOP : protocols::splice
TargetRotamerCoordsCOP : protocols::match::downstream
TargetRotamerCoordsOP : protocols::match::downstream
TaskAwareCstsCOP : protocols::protein_interface_design::movers
TaskAwareCstsOP : protocols::protein_interface_design::movers
TaskAwareMinMoverCOP : protocols::minimization_packing
TaskAwareMinMoverOP : protocols::minimization_packing
TaskAwareSASAFilterCOP : protocols::simple_filters
TaskAwareSASAFilterOP : protocols::simple_filters
TaskAwareScoreTypeFilterCOP : protocols::simple_filters
TaskAwareScoreTypeFilterOP : protocols::simple_filters
TaskAwareSymMinMoverCOP : protocols::minimization_packing::symmetry
TaskAwareSymMinMoverOP : protocols::minimization_packing::symmetry
TaskFactoryCOP : core::pack::task
TaskFactoryOP : core::pack::task
TaskOperationCOP : core::pack::task::operation
TaskOperationCreatorCOP : core::pack::task::operation
TaskOperationCreatorOP : core::pack::task::operation
TaskOperationFactoryCOP : core::pack::task::operation
TaskOperationFactoryOP : core::pack::task::operation
TaskOperationFeaturesCOP : protocols::features
TaskOperationFeaturesOP : protocols::features
TaskOperationOP : core::pack::task::operation
TaskSelectorCOP : protocols::residue_selectors
TaskSelectorOP : protocols::residue_selectors
TautomerizeAnomerMoverCOP : protocols::carbohydrates
TautomerizeAnomerMoverOP : protocols::carbohydrates
TBMB_HelperCOP : protocols::cyclic_peptide::crosslinker
TBMB_HelperOP : protocols::cyclic_peptide::crosslinker
TCRloopRefineAP : protocols::tcr
TCRloopRefineCAP : protocols::tcr
TCRloopRefineCOP : protocols::tcr
TCRloopRefineOP : protocols::tcr
TCRmodelAP : protocols::tcr
TCRmodelCAP : protocols::tcr
TCRmodelCOP : protocols::tcr
TCRmodelOP : protocols::tcr
TCRseqInfoAP : protocols::tcr
TCRseqInfoCAP : protocols::tcr
TCRseqInfoCOP : protocols::tcr
TCRseqInfoOP : protocols::tcr
TemlateAssemblyCOP : protocols::hybridization
TemlateAssemblyOP : protocols::hybridization
TemperatureControllerCOP : protocols::canonical_sampling
TemperatureControllerOP : protocols::canonical_sampling
TemperedDockingOP : protocols::docking
TemperingBaseAP : protocols::canonical_sampling
TemperingBaseCAP : protocols::canonical_sampling
TemperingBaseCOP : protocols::canonical_sampling
TemperingBaseOP : protocols::canonical_sampling
TemplateCOP : protocols::abinitio
TemplateFragmentClaimerAP : protocols::topology_broker
TemplateFragmentClaimerCAP : protocols::topology_broker
TemplateFragmentClaimerCOP : protocols::topology_broker
TemplateFragmentClaimerOP : protocols::topology_broker
TemplateHistoryCOP : protocols::hybridization
TemplateHistoryOP : protocols::hybridization
TemplateJumpClaimerAP : protocols::topology_broker
TemplateJumpClaimerCAP : protocols::topology_broker
TemplateJumpClaimerCOP : protocols::topology_broker
TemplateJumpClaimerOP : protocols::topology_broker
TemplateJumpSetupCOP : protocols::abinitio
TemplateJumpSetupOP : protocols::abinitio
TemplateOP : protocols::abinitio
TemplatesAP : protocols::abinitio
TemplatesCAP : protocols::abinitio
TemplatesCOP : protocols::abinitio
TemplatesOP : protocols::abinitio
TenANeighborGraphCOP : core::scoring
TenANeighborGraphOP : core::scoring
TermInfo : protocols::sic_dock
TerminiConstraintGeneratorCOP : protocols::constraint_generator
TerminiConstraintGeneratorOP : protocols::constraint_generator
TerminusMotifScorerCOP : protocols::sewing::scoring
TerminusMotifScorerCreatorCOP : protocols::sewing::scoring
TerminusMotifScorerCreatorOP : protocols::sewing::scoring
TerminusMotifScorerOP : protocols::sewing::scoring
TestCompositeRealMetricCOP : core::simple_metrics
TestCompositeRealMetricOP : core::simple_metrics
TestCompositeStringMetricCOP : core::simple_metrics
TestCompositeStringMetricOP : core::simple_metrics
TestPerResidueRealMetricCOP : core::simple_metrics
TestPerResidueRealMetricOP : core::simple_metrics
TestPerResidueStringMetricCOP : core::simple_metrics
TestPerResidueStringMetricOP : core::simple_metrics
TestRealMetricCOP : core::simple_metrics
TestRealMetricOP : core::simple_metrics
TestStringMetricCOP : core::simple_metrics
TestStringMetricOP : core::simple_metrics
TetherLigandCOP : protocols::ligand_docking
TetherLigandCOPs : protocols::ligand_docking
TetherLigandOP : protocols::ligand_docking
TetherLigandOPs : protocols::ligand_docking
TetrahedralMetal_HelperCOP : protocols::cyclic_peptide::crosslinker
TetrahedralMetal_HelperOP : protocols::cyclic_peptide::crosslinker
ThermalMinimizerCOP : protocols::recces::scratch
ThermalMinimizerOP : protocols::recces::scratch
ThermalSamplingMoverCOP : protocols::recces::scratch
ThermalSamplingMoverOP : protocols::recces::scratch
ThermodynamicMoverCOP : protocols::canonical_sampling
ThermodynamicMoverOP : protocols::canonical_sampling
ThermodynamicObserverCOP : protocols::canonical_sampling
ThermodynamicObserverOP : protocols::canonical_sampling
ThreadingJobCOP : protocols::comparative_modeling
ThreadingJobInputterCOP : protocols::comparative_modeling
ThreadingJobInputterOP : protocols::comparative_modeling
ThreadingJobOP : protocols::comparative_modeling
ThreadSequenceOperationCOP : protocols::task_operations
ThreadSequenceOperationOP : protocols::task_operations
three_atom_set : core::chemical , core::scoring::mm
TiltMoverCOP : protocols::membrane
TiltMoverOP : protocols::membrane
TimeEvaluatorCOP : protocols::evaluation
TimeEvaluatorOP : protocols::evaluation
TimingProfileMetricCOP : core::simple_metrics::metrics
TimingProfileMetricOP : core::simple_metrics::metrics
TMA_HelperCOP : protocols::cyclic_peptide::crosslinker
TMA_HelperOP : protocols::cyclic_peptide::crosslinker
TMHTopologySamplerClaimerAP : protocols::topology_broker
TMHTopologySamplerClaimerCAP : protocols::topology_broker
TMHTopologySamplerClaimerCOP : protocols::topology_broker
TMHTopologySamplerClaimerOP : protocols::topology_broker
TNA_SuitePotentialCOP : core::scoring::rna
TNA_SuitePotentialOP : core::scoring::rna
TopEntitySetCOP : protocols::pack_daemon
TopEntitySetOP : protocols::pack_daemon
TopNMotifScorerCOP : protocols::sewing::scoring
TopNMotifScorerCreatorCOP : protocols::sewing::scoring
TopNMotifScorerCreatorOP : protocols::sewing::scoring
TopNMotifScorerOP : protocols::sewing::scoring
TopologyBrokerAP : protocols::topology_broker
TopologyBrokerCAP : protocols::topology_broker
TopologyBrokerCOP : protocols::topology_broker
TopologyBrokerMoverCOP : protocols::protein_interface_design::movers
TopologyBrokerMoverOP : protocols::protein_interface_design::movers
TopologyBrokerOP : protocols::topology_broker
TopologyClaimerAP : protocols::topology_broker
TopologyClaimerCAP : protocols::topology_broker
TopologyClaimerCOP : protocols::topology_broker
TopologyClaimerOP : protocols::topology_broker
TopOutFuncCOP : core::scoring::func
TopOutFuncOP : core::scoring::func
torsion_bin_string : core::conformation
TorsionBinSimilarityCOP : protocols::frag_picker::scores
TorsionBinSimilarityOP : protocols::frag_picker::scores
TorsionClaimAP : protocols::environment::claims
TorsionClaimCAP : protocols::environment::claims
TorsionClaimCOP : protocols::environment::claims
TorsionClaimOP : protocols::environment::claims
TorsionCOP : protocols::protein_interface_design::filters
TorsionDOFMoverCOP : protocols::simple_moves
TorsionDOFMoverOP : protocols::simple_moves
TorsionFeatureCOP : protocols::comparative_modeling::features
TorsionFeatureOP : protocols::comparative_modeling::features
TorsionFourierComponentCOP : core::scoring::dna
TorsionFourierComponentOP : core::scoring::dna
TorsionFragmentLibraryCOP : protocols::frags
TorsionFragmentLibraryOP : protocols::frags
TorsionFragmentMoverOP : protocols::frags
TorsionFragmentOP : protocols::frags
TorsionOP : protocols::protein_interface_design::filters
torsionparam_vector : core::energy_methods
TorsionRangeVec : protocols::make_rot_lib
TorsionRangeVecVec : protocols::make_rot_lib
TorsionRestrictedKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
TorsionRestrictedKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
TorsionSamplingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
TorsionSamplingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
TorsionSetMoverCOP : protocols::simple_moves
TorsionSetMoverOP : protocols::simple_moves
TorsionSweepingKinematicPerturberCOP : protocols::loops::loop_closure::kinematic_closure
TorsionSweepingKinematicPerturberOP : protocols::loops::loop_closure::kinematic_closure
TotalEnergyMetricCOP : core::simple_metrics::metrics
TotalEnergyMetricOP : core::simple_metrics::metrics
TotalSasaFilterCOP : protocols::simple_filters
TotalSasaFilterOP : protocols::simple_filters
TotalScoreFeaturesCOP : protocols::features
TotalScoreFeaturesOP : protocols::features
traceIter : core::scoring::packstat
traces : core::scoring::packstat
TrajectoryLoggerCOP : protocols::loop_modeling::utilities
TrajectoryLoggerOP : protocols::loop_modeling::utilities
TrajectoryMapFeaturesCOP : protocols::features
TrajectoryMapFeaturesOP : protocols::features
TrajectoryRecorderOP : protocols::canonical_sampling
TrajectoryReportToDBCOP : protocols::features
TrajectoryReportToDBOP : protocols::features
TransformIntoMembraneMoverCOP : protocols::membrane
TransformIntoMembraneMoverOP : protocols::membrane
TransientCutpointHandlerCOP : protocols::stepwise::monte_carlo::mover
TransientCutpointHandlerOP : protocols::stepwise::monte_carlo::mover
TranslateCOP : protocols::ligand_docking
TranslateCOPs : protocols::ligand_docking
TranslateOP : protocols::ligand_docking
TranslateOPs : protocols::ligand_docking
TranslationFreePeptideMoverCOP : protocols::backbone_moves::local_backbone_mover::free_peptide_movers
TranslationFreePeptideMoverOP : protocols::backbone_moves::local_backbone_mover::free_peptide_movers
TranslationMoverCOP : protocols::membrane
TranslationMoverOP : protocols::membrane
TranslationRotationMoverCOP : protocols::membrane
TranslationRotationMoverOP : protocols::membrane
TreeBuilderCOP : protocols::nonlocal
TreeBuilderOP : protocols::nonlocal
TrialCounterCOP : protocols::moves
TrialCounterOP : protocols::moves
TrialMoverCOP : protocols::moves
TrialMoverOP : protocols::moves
TriazolamerMoverCOP : protocols::simple_moves::triazolamer
TriazolamerMoverOP : protocols::simple_moves::triazolamer
TriazolamerRandomSmallMoverCOP : protocols::simple_moves::triazolamer
TriazolamerRandomSmallMoverOP : protocols::simple_moves::triazolamer
TrieCollectionCOP : core::scoring::trie
TrieCollectionOP : core::scoring::trie
TrieCountPairBaseCOP : core::scoring::trie
TrieCountPairBaseOP : core::scoring::trie
TrieCountPairGenericCOP : core::scoring::etable::etrie
TrieCountPairGenericOP : core::scoring::etable::etrie
TrieVsTrieCachedDataContainerBaseCOP : core::scoring::trie
TrieVsTrieCachedDataContainerBaseOP : core::scoring::trie
Trig : core
Trigger : protocols::medal
Triggers : protocols::simple_moves::rational_mc
TrigonalPlanarMetal_HelperCOP : protocols::cyclic_peptide::crosslinker
TrigonalPlanarMetal_HelperOP : protocols::cyclic_peptide::crosslinker
TrigonalPyramidalMetal_HelperCOP : protocols::cyclic_peptide::crosslinker
TrigonalPyramidalMetal_HelperOP : protocols::cyclic_peptide::crosslinker
TrisBpyScoreCOP : protocols::sic_dock::scores
TrisBpyScoreOP : protocols::sic_dock::scores
TriVec : core::scoring::epr_deer
TriVecC : core::scoring::epr_deer
trRosettaConstraintGeneratorCOP : protocols::trRosetta_protocols::constraint_generators
trRosettaConstraintGeneratorOP : protocols::trRosetta_protocols::constraint_generators
trRosettaOutputs_v1COP : protocols::trRosetta
trRosettaOutputs_v1OP : protocols::trRosetta
trRosettaOutputsBaseCOP : protocols::trRosetta
trRosettaOutputsBaseOP : protocols::trRosetta
trRosettaProtocol_v1COP : protocols::trRosetta
trRosettaProtocol_v1OP : protocols::trRosetta
trRosettaProtocolBaseCOP : protocols::trRosetta
trRosettaProtocolBaseOP : protocols::trRosetta
trRosettaProtocolMoverCOP : protocols::trRosetta_protocols::movers
trRosettaProtocolMoverOP : protocols::trRosetta_protocols::movers
TrueFilterCOP : protocols::filters
TrueFilterOP : protocols::filters
TrueResidueSelectorCOP : core::select::residue_selector
TrueResidueSelectorOP : core::select::residue_selector
TryDisulfPermutationsCOP : protocols::cyclic_peptide
TryDisulfPermutationsCOPs : protocols::cyclic_peptide
TryDisulfPermutationsOP : protocols::cyclic_peptide
TryDisulfPermutationsOPs : protocols::cyclic_peptide
TwelveANeighborGraphCOP : core::scoring
TwelveANeighborGraphOP : core::scoring
two_atom_set : core::chemical , core::scoring::mm
TwoBodyEnergyCOP : core::scoring::methods
TwoBodyEnergyOP : core::scoring::methods
TypesMap : protocols::dna