A | B | C | D | E | F | G | H | I | J | K | L | M | N | O | P | Q | R | S | T | U | V | W | X | Y | Z | _

A: A (aaa); A; A (test.T850_SubClassing); A (n1); A (n1::n2); A1; A2; A3; A3BHbsCreatorMover; A3BHbsCreatorMover (create_a3b_hbs); A3BHbsDockDesignMinimizeMover; A3BPeptideBuilder; A4; AA; AAAA (aaaa); abbinding; AbInitio_MPI; AbsFunc; AbsoluteValueExpression (numeric::expression_parser); Access; accumulator (detail); AddExpression (numeric::expression_parser); AddFrameworkProfilesOperation (protocols::antibody::task_operations); AgglomerativeHierarchicalClusterer (numeric); AlignChunkMover (apps::pilot); AllCrmsd; AnchorFinderMover; AndExpression (numeric::expression_parser); Animal; Anonymous; ansi_color_escape (detail); AntibodyDesignMoverGenerator (protocols::antibody::design); AntibodyInfoRMLoader (protocols::surface_docking); AntibodyInfoRMLoaderCreator (protocols::antibody); AntibodyInfoRMOptions (protocols::antibody); AntibodyInfoRMOptionsCreator (protocols::antibody); any_type (rosetta_binders::has_insertion_operator_implementation); any_type (utility::type_traits::has_insertion_operator_implementation); AnyOption (utility::options); AnyOptionKey (utility::options); AnyVectorOption (utility::options); AnyVectorOptionKey (utility::options); APDBCMover; Application (protocols::abinitio); ApplicationContext (protocols::abinitio); ApplyFilterMover; AppSettings; AppWindow (job_manager); Arch; ArchI32; ArchI52; ArchI53; ArchO32; ArchO42; ArchO43; ArchP4_42; ArchP4g_42d; ArchP4m_42d; ArchP6_32; ArchP6m_32d; ArchT32; ArchT33; arg_converter (detail); arg_data (detail); arg_data< T, Char, NUM_ARGS, 0 > (detail); arg_formatter (detail); arg_formatter_base (detail); arg_join; arg_mapper (detail); arg_ref (detail); Argument (ui::network); ArithmeticASTAndClause (numeric::expression_parser); ArithmeticASTExpression (numeric::expression_parser); ArithmeticASTFactor (numeric::expression_parser); ArithmeticASTFunction (numeric::expression_parser); ArithmeticASTNode (numeric::expression_parser); ArithmeticASTOrClause (numeric::expression_parser); ArithmeticASTRestAndClause (numeric::expression_parser); ArithmeticASTRestExpression (numeric::expression_parser); ArithmeticASTRestOrClause (numeric::expression_parser); ArithmeticASTRestTerm (numeric::expression_parser); ArithmeticASTTerm (numeric::expression_parser); ArithmeticASTValue (numeric::expression_parser); ArithmeticScanner (numeric::expression_parser); Array (variadic_template); Array0 (utility::graph); Array< T, N > (variadic_template); ArrayPool (utility::graph); ArrayPoolElement (utility::graph); Arrays; AssignClusterToolMover; ASTConsumer; ASTFrontendAction; ASTPrinter (numeric::expression_parser); ASTVisitor (numeric::expression_parser); Atom; Atom (sidechain_cst_3); AtomNumFilter; AuthorNames (basic::citation_manager); auto_id (detail); AutoKey (utility::keys); AverageLinkClusterer (numeric); AxisRotationSampler (numeric)

B: B (bbb); B; B (ui::network); B (bbbb); B2 (bbbb); B3AADihedralGrabber; Bowman::BackEnd (ui::network); BacksideHbondFinderMover; BadFileFormatException (ui::util); BadInput (utility::excn); Ball (numeric::geometry::hashing); Base; Base (rosetta.utility.py); Base (utility::py); BaseA; BaseArchiveManager (protocols::jd2::archive); BaseB; BaseC; BaseD; BaseJumpSetup; BaseRosettaScriptsTask (pyrosetta.distributed.tasks.rosetta_scripts); basic_compiled_format (detail); basic_cstring_view; basic_data (detail); basic_format_arg; basic_format_args; basic_format_context; basic_format_parse_context; basic_format_specs; basic_memory_buffer; basic_mpi_ostream (utility::io::mpi_stream); basic_mpi_ostreambase (utility::io::mpi_stream); basic_mpi_streambuf (utility::io::mpi_stream); basic_otstream (basic); basic_printf_context; basic_printf_parse_context; basic_string_view; basic_otstream::basic_tstringbuf (basic); basic_unzip_streambuf (zlib_stream); basic_zip_istream (zlib_stream); basic_zip_istreambase (zlib_stream); basic_zip_ostream (zlib_stream); basic_zip_ostreambase (zlib_stream); basic_zip_streambuf (zlib_stream); BasicDataCache (basic::datacache); BasicTest (pyrosetta.tests.distributed.cluster.skip_command_line_test); BB; BBBB (aaaa::bbbb); BBBB_not_binded (aaaa::bbbb); BBG_Cyclic_Mover; BBGaussianMover; BBMover; BBTorsionSRFD (core::fragment); begin (utility::keys::lookup); Benchmark; BicubicSpline (numeric::interpolation::spline); big_decimal_fp (detail); bigint (detail); bin_index_hasher (numeric::geometry::hashing); BinaryExpression (numeric::expression_parser); Binder (binder); BinderASTConsumer; BinderFrontendAction; BinderVisitor; Bite (ObjexxFCL::format); bits (detail); BitSet (utility); BitVector (utility); BodyPosition (numeric); Bola; Bond; BondedRNA_Mover; BooleanArgument (ui::network); BooleanExpressionCreator (numeric::expression_parser); BooleanExpressionScanner (numeric::expression_parser); BooleanOption (utility::options); BooleanOptionKey (utility::options); BooleanVectorOption (utility::options); BooleanVectorOptionKey (utility::options); Bound (utility); boundaries (detail); BoundingBox (numeric::geometry); Bowman (ui::network); BowmanModel (ui::network); BowmanThread (ui::network); BowmanView (ui::network); BreadthMover; BruteFunGroupTK; BruteRotSel; buffer (detail); buffer_appender (detail); buffer_traits (detail); buffered_file; BufferedSignalHub (utility::signals); BuildFullModel; BUNS_Output; BuriedUnsatPolarsFinder; byte (ObjexxFCL); bytes

C: C (bbbb::cccc); Cache; cache_accessor (detail::dragonbox); cache_accessor< double > (detail::dragonbox); cache_accessor< float > (detail::dragonbox); CacheableData (basic::datacache); CacheableResRotPairFloatMap (basic::datacache); CacheableString (basic::datacache); CacheableStringFloatMap (basic::datacache); CacheableStringIntegerMap (basic::datacache); CacheableStringMap (basic::datacache); CacheableUint64MathMatrixFloatMap (basic::datacache); CalcCdrRms; CalcIrms; CalcsTestMover; calculation_data_for_one_block_pair; Calculator (numeric); CalculatorParser (numeric); CapriData; CapriTotalEnergy; CapriTwoBodyEnergy; CArray (ObjexxFCL); CArrayP (ObjexxFCL); CartPerturber; CartRefineWrapperMover; CaToAllAtom; CAtrace; CCCC (aaaa::cccc); CCParam; CD2B_Method (test.T870_SubClassing_EnergyMethods2); CenRelaxMover; CenRotCanonicalMover; CenRotDockingMover; CenRotRBRelaxMover; CenRotRelaxMover; CenRotSidechainMover; ChallengeMover; char_converter (detail); arg_formatter_base::char_spec_handler (detail); char_specs_checker (detail); char_t_impl (detail); char_t_impl< S, enable_if_t< is_string< S >::value > > (detail); CheeseFunction; CheshireCell; ChiMover; chrono_format_checker (detail); chrono_formatter (detail); Chunk (ObjexxFCL); ChunkExponent (ObjexxFCL); ChunkVector (ObjexxFCL); CI1B_Method (test.T870_SubClassing_EnergyMethods2); CI2B_Method (test.T870_SubClassing_EnergyMethods2); CI2BScoreMethod (test.Workshop9_my_shapes); Citation (basic::citation_manager); CitationCollection (basic::citation_manager); CitationCollectionBase (basic::citation_manager); CitationCollectionList (basic::citation_manager); CitationManager (basic::citation_manager); CL; ClashCheck; ClassBinder (binder); ClassicAbinitio; ClassKeyMap (utility::keys); ClassKeyVector (utility::keys); classproperty (pyrosetta.distributed.utility.log); ClassVisitor; ClearPoseHeader; ClobberWarning (pyrosetta.bindings.scores.base); ClosabilityScore; CloseContactWithResidue; ClosureMover; CloudArchiveManagerWrapper; Cluster; ClusterCycDisulf; ClusteringTreeNode (numeric); ClusterOptions (numeric); ClusterPhilStyle; CnlRes; CollectCoordinates; CollectNeighbors; color_type (detail); color_type::color_union (detail); ColorByLipidType; ColPointers (numeric); ColsPointer (numeric); Column (basic::database::schema_generator); ColVectors (numeric); Combine_Tags_Info; CommandLauncher (job_manager); CommandManager (job_manager); CommandRunner (job_manager); CommandWindow (job_manager); compare_interp_range (numeric::interpolation::spline); compare_VallIndex_gt; compare_VallIndex_lt; CompareKDPoints (numeric::kdtree); ComparingTracer (basic); compile_parse_context (detail); compile_string; compiled_format (detail); compiled_format_base (detail); compiled_format_base< S, enable_if_t< is_compile_string< S >::value > > (detail); compiled_string (detail); CompleteLinkClusterer (numeric); complex_interface_optimize; Component (enumerate_junctions); ComponentDoc (pyrosetta.distributed.docs); CompoundInterpolator (numeric::interpolation::spline); compute_Irmsd; ComputeProfileMover; ComputeSAXSSpectrum; ComputeTotalDistCst (protocols::abinitio); concatenate_poses (apps::pilot::frankdt); ConcertedTorsionMover; conditional_helper (detail); Config (binder); Config_map (utility::json_spirit); Config_vector (utility::json_spirit); ConfigDialog (ui::config); ConsensusFragmentMover; xyzStripeHash::const_iterator (numeric::geometry::hashing); ConstDataMap (basic::datacache); ConstOverload; Constraint (basic::database::schema_generator); Constraint (core::scoring::constraints); ConstraintConfig; ConstraintMinimizer; ConstraintStatsMover; ConstraintToolMover; ConstructorBindingInfo (binder); Consts; Context (binder); ContextIndependentOneBodyEnergy (core::scoring::methods); ContextIndependentTwoBodyEnergy (scoring::methods); ContextualZipFile (ez_setup); Converter; converter (detail); Converter1Param; CoordinateArray_RMSD_FlatLookup (numeric::coordinate_fitting); COP_to_Python_converter (utility::py); CorrelationTime (job_manager); CountContact; Counter (numeric::geometry::hashing); counting_buffer (detail); counting_iterator (detail); CoupledFunc; CovalentPeptidomimeticCreator; CovalentPeptidomimeticDockDesign; CrystCluster; CrystDesign; CrystFFTDock; CrystHbondsReporter; CrystRelax; CSI_Sequence (utility); CST; Cstring (ObjexxFCL); arg_formatter_base::cstring_spec_handler (detail); cstring_type_checker (detail); CubicPolynomial (numeric); CubicSpline (numeric::interpolation::spline); custom_formatter (detail); custom_value (detail); CustomAbinitio (protocols::abinitio); CustomFragmentMover (apps::pilot); CustomMover; CustomStarTreeMover (apps::pilot); CycBBMover

D: data (detail); Data1; DatabaseMode (utility::sql_database); DatabaseResourceLocator (basic::resource_manager::locator); DatabaseResourceLocatorCreator (basic::resource_manager::locator); DatabaseSessionManager (utility::sql_database); DatabaseWindow (job_manager); DataCache (basic::datacache); DataCache_CacheableData (basic::datacache); DataClass (myspace); DataMap (basic::datacache); DataMapObj (basic::datacache); DataStruct (myspace); DatumStruct (myspace); DbBigInt (basic::database::schema_generator); DbDataType (basic::database::schema_generator); DbDouble (basic::database::schema_generator); DbInteger (basic::database::schema_generator); DbMoverMessageListener (basic::mpi); DbReal (basic::database::schema_generator); DbText (basic::database::schema_generator); DbTextKey (basic::database::schema_generator); DbUUID (basic::database::schema_generator); DCST; decimal_fp (detail::dragonbox); decision_function; deep_copy_vector1 (utility); DeepCopyOP (utility::pointer); default_arg_formatter (detail); DefaultProtocolNameFilter (pyrosetta.distributed.cluster.logging_filters); DefaultSocketAddressFilter (pyrosetta.distributed.cluster.logging_filters); DefaultTaskIdFilter (pyrosetta.distributed.cluster.logging_filters); Json_grammer::definition (utility::json_spirit); Delete; DeleteJob (job_manager); DeleteSegments; DenseBoolMap (utility); DereferenceIterator (utility); Derived; DerivedA; DerivedB; DerivedC; DerivedD; Design (enumerate_junctions); DesignBenchmark; Designer; DesignGlycansProtocol; DesignOpts; DetectSymmetry; DHR (enumerate_junctions); DiagnosticData (basic::datacache); DietNode (numeric); Digraph (utility::graph); Dimension (ObjexxFCL); DimensionExpression (ObjexxFCL); DimensionExpressionCon (ObjexxFCL); DimensionExpressionCube (ObjexxFCL); DimensionExpressionDiv (ObjexxFCL); DimensionExpressionMax (ObjexxFCL); DimensionExpressionMin (ObjexxFCL); DimensionExpressionMul (ObjexxFCL); DimensionExpressionPow (ObjexxFCL); DimensionExpressionRef (ObjexxFCL); DimensionExpressionSquare (ObjexxFCL); DimensionExpressionSub (ObjexxFCL); DimensionExpressionSum (ObjexxFCL); DirectedEdge (utility::graph); DirectedEdgeList (utility::graph); DirectedEdgeListConstIterator (utility::graph); DirectedEdgeListElement (utility::graph); DirectedEdgeListIterator (utility::graph); DirectedNode (utility::graph); DiscreteIntervalEncodingTree (numeric); DisjointSets (utility::graph); DistanceMatrix; DistancePrediction; DistributionSampler (numeric::random); DisulfEpos; DisulfEposDatabase; DisulfideBondEnergy; DivideExpression (numeric::expression_parser); divtest_table_entry (detail); Dock; DockFragmentsMover; DockGlycansProtocol; DockingBenchmark; DockingCase (arls_impl); DockingFile (arls_impl); Dog; Domain; DomainAssemblerNDocker; DomainDescription; DomainFinder; DougsDockDesignMinimizeMagicMover; DS_Node (utility::graph); DsfHit; dsRNA_grow; DuboisChiMover; DummyMover; dynamic_arg_list (detail); dynamic_format_arg_store; dynamic_format_specs (detail); dynamic_formatter; dynamic_specs_handler (detail); DynamicIndexRange (ObjexxFCL); DynamicProfileThis (basic)

E: Edge (utility::graph); EdgeList (utility::graph); EdgeListConstIterator (utility::graph); EdgeListElement (utility::graph); EdgeListIterator (utility::graph); ElecDensMinPackMinMover; ElecDensMinPackMinReporter; XMLSchemaSimpleSubelementList::ElementSummary (utility::tag); EllipseParameters (numeric::linear_algebra); Emitter (basic); end (utility::keys::lookup); EnergiesAccessor (pyrosetta.bindings.scores.energies); EnergyAndFilename; EnergyMethod (pyrosetta); EnergyMethodCreator (core::scoring::methods); EnergyMethodCreator (rosetta.core.scoring.methods); EnumBinder (binder); Enumerate1 (utility); Enums; EnvToolMover; EqualsExpression (numeric::expression_parser); erraser_option (erraser_option); ErraserError (erraser_util); error_code; error_handler (detail); Error_position (utility::json_spirit); ErrorHandler; EulerAngles (numeric); Evaluator (myspace); Exception; Exception (utility::excn); EXCN_Stop_BFS (utility::graph); ExecutionResult (basic); ExemplarMover; ExposedStrandMover; Expression (numeric::expression_parser); ExpressionCreator (numeric::expression_parser); ExtractATD; ExtraFloatScoresDataAccessor (pyrosetta.bindings.scores.extra_scores); ExtraScoresAccessor (pyrosetta.bindings.scores.extra_scores); ExtraScoresAccessorBase (pyrosetta.bindings.scores.extra_scores); ExtraStringScoresDataAccessor (pyrosetta.bindings.scores.extra_scores)

F: Factory (utility::factory); fallback_formatter (detail); fallback_formatter< T, Char, enable_if_t< is_streamable< T, Char >::value > > (detail); fallback_uintptr (detail); FArray (ObjexxFCL); FArray1 (ObjexxFCL); FArray1A (ObjexxFCL); FArray1D (ObjexxFCL); FArray1P (ObjexxFCL); FArray2 (ObjexxFCL); FArray2A (ObjexxFCL); FArray2D (ObjexxFCL); FArray2P (ObjexxFCL); FArray3 (ObjexxFCL); FArray3A (ObjexxFCL); FArray3D (ObjexxFCL); FArray3P (ObjexxFCL); FArray4 (ObjexxFCL); FArray4A (ObjexxFCL); FArray4D (ObjexxFCL); FArray4P (ObjexxFCL); FArray5 (ObjexxFCL); FArray5A (ObjexxFCL); FArray5D (ObjexxFCL); FArray5P (ObjexxFCL); FArray6 (ObjexxFCL); FArray6A (ObjexxFCL); FArray6D (ObjexxFCL); FArray6P (ObjexxFCL); FArrayInitializer (ObjexxFCL); FArraySection (ObjexxFCL); FArrayTraits (ObjexxFCL); FArrayTraits< numeric::xyzVector< T > > (ObjexxFCL); FaSolReporter; FastRelaxPerformanceBenchmark; FastRemainderSelector (ObjexxFCL); FastRemainderSelector (numeric); FastRemainderSelector< T, true > (numeric); FastRemainderSelector< T, true > (ObjexxFCL); FastThreadingMover; Features; FeaturesReporter (protocols::features); fiberHit; File (ui::task); FileContentsMap (utility::io); FileID (ui::task); FileListResourceLocator (basic::resource_manager::locator); FileListResourceLocatorCreator (basic::resource_manager::locator); FileName (utility::file); FileNotFound (utility::excn); FileOption (utility::options); FileOptionKey (utility::options); FileStream (basic::resource_manager::locator); FileSystemResourceLocator (basic::resource_manager::locator); FileSystemResourceLocatorCreator (basic::resource_manager::locator); FileTableModel (ui::task); FileTableWatcher (ui::task); FileVectorOption (utility::options); FileVectorOptionKey (utility::options); fill_t (detail); Filter; FilterDocs (pyrosetta.distributed.docs); FindOptimalHydrophobicThk; FitMover; FixbbJobQueen; FixbbSimAnnealer (core::pack::annealer); fixed_buffer_traits (detail); fixed_handler (detail); fixedsizearray0 (utility); fixedsizearray1 (utility); FixedSizeLexicographicalIterator (utility); S::FL_not_binded; FlatLookup (numeric::coordinate_fitting); xyzStripeHashWithMeta::float4 (numeric::geometry::hashing); float4 (basic::gpu); float_info (detail::dragonbox); float_info< double > (detail::dragonbox); float_info< float > (detail::dragonbox); float_specs (detail); FloatArgument (ui::network); Floating_point; FloatScMonteCarlo; FloatScRandomChi; FloatScRotMover; FloppyTailMover; Foldptn; FoldTreeOutputter; ForeignKey (basic::database::schema_generator); ForgetMover; format_arg_store; format_args; format_decimal_result (detail); formatter< TupleT, Char, enable_if_t< fmt::is_tuple_like< TupleT >::value > >::format_each; format_error; format_handler (detail); format_int; format_part (detail); format_part_array (detail); format_string_checker (detail); format_string_compiler (detail); format_to_n_result; formatbuf (detail); formattable; formatter; formatter< arg_join< It, Sentinel, Char >, Char >; formatter< bytes >; formatter< Char[N], Char >; formatter< detail::bigint >; formatter< std::chrono::duration< Rep, Period >, Char >; formatter< std::chrono::time_point< std::chrono::system_clock >, Char >; formatter< std::tm, Char >; formatter< T, Char, enable_if_t< detail::type_constant< T, Char >::value !=detail::type::custom_type > >; formatter< T, Char, enable_if_t< fmt::is_range< T, Char >::value &&(has_formatter< detail::value_type< T >, format_context >::value||detail::has_fallback_formatter< detail::value_type< T >, format_context >::value) > >; formatter< tuple_arg_join< Char, T... >, Char >; formatter< TupleT, Char, enable_if_t< fmt::is_tuple_like< TupleT >::value > >; formatter< void *, Char >; formatting_base; formatting_range; formatting_tuple; fp (detail); FragCaptureMover (protocols::moves); FragID; FragInfo; FragmentAssemblyMover; FragmentBasedDesign; FragMonteCarlo; Fstring (ObjexxFCL); Fsubstring (ObjexxFCL); FullModelJobQueen; FunctionBinder (binder); FunctionID (ui::network); BowmanModel::FunctionIdentifier (ui::network); FunctionSetupDialog (ui::network); FunctionToken (numeric::expression_parser); Functor (ui::task); FunctorASyncSequence (ui::task); FunctorNetworkCall (ui::task); FunctorSequence (ui::task); FunctorTest; FunGroupTK

H: H5PyFragmentStoreProvider (pyrosetta.protocols.h5_fragment_store_provider); H5StructureStoreProvider (pyrosetta.protocols.h5_structure_store_provider); hackLAMMover; basic_format_arg::handle; Handler; HandlerMixin (pyrosetta.distributed.cluster.logging_handlers); has (utility::keys::lookup); has_equal_operator_s (rosetta_binders); has_equal_operator_s< std::map< A, B > > (rosetta_binders); has_equal_operator_s< std::pair< A, B > > (rosetta_binders); has_equal_operator_s< std::set< A > > (rosetta_binders); has_equal_operator_s< std::vector< A > > (rosetta_binders); has_equal_operator_s< T > (rosetta_binders); has_equal_operator_s< utility::vector0< A > > (rosetta_binders); has_equal_operator_s< utility::vector1< A > > (rosetta_binders); has_insertion_operator_s (rosetta_binders); has_insertion_operator_s (utility::type_traits); hbgeom_to_measure; hbond_energy_strat; hbond_geom_strat; hbond_strat; HBondConformation (apps::pilot::momeara); HBondedPairIterator; HbondInfo (local); HBondReporter; HbondZinc; HbondZincBackbone; HbsCreatorMover; HbsDesignMover; HDdesignMover; HDmakerMover; Cache::head_t; heap (utility); HeapContainer; HeartBeat (pyrosetta.tests.distributed.test_gil); HECTAllMover; HECTMover; HECTUBQMover; HelicalBundleDialogueWidget (ui::ui_protocols::helical_bundle); HelicalBundlePoseDrawOpenGLWidget (ui::ui_protocols::helical_bundle); HelicalPdbGeneratorMover; HelixHit; HelixMover (apps::pilot); HelixOptionWidget (ui::ui_protocols::helical_bundle); HemaggTrimer; HemeBindingMover; HemeReplace; HideVertexVisitor (utility::graph); HierarchicalDataMap (basic::datacache); Histogram (numeric::interpolation); HistogramAP (numeric::interpolation); HistogramCAP (numeric::interpolation); HistogramCOP (numeric::interpolation); HistogramOP (numeric::interpolation); history_queue_struct (utility); Hit; HIT; HitCmp; HolesTrainingDataMover; HomogeneousTransform (numeric); HomogeneousTransform_Double (numeric); HotspotPlacementMover; HPatchByChainNPDCalculator; HPatchByChainNPDCalculatorCreator; HPatchNPDCalculator; HPatchNPDCalculatorCreator; HubDenovo; HyperRectangle (numeric::kdtree)

I: IAMover; icstream (utility::io); id_adapter (detail); IdentifyCDRClusters; in_place_list (utility); IncludeSet (binder); Index (basic::database::schema_generator); IndexPack (ui::network); IndexRange (ObjexxFCL); InitializerSentinel (ObjexxFCL::internal); InjectorMover; Inline_File_Provider (utility); Inline_File_Provider_Hook (utility); InlineDocs (pyrosetta.distributed.docs); outer::inner; outer::inner2; outer::inner3; Base::InnerBase; InnerJob (protocols::jd2); Base::InnerTemplate; input_mutation; InputData (myspace); InputError (pyrosetta.distributed.cluster.exceptions); InputFileError (pyrosetta.distributed.cluster.exceptions); InsertGenerator (basic::database::insert_statement_generator); InstantiateModulesBenchmark; int128_t (detail); int_checker (detail); int_checker< true > (detail); int_type_checker (detail); int_writer (detail); integer_sequence (detail); IntegerArgument (ui::network); IntegerOption (utility::options); IntegerOptionKey (utility::options); IntegerVectorOption (utility::options); IntegerVectorOptionKey (utility::options); Integral; InteractionDistMinimizer; InteractionGraphPerformanceBenchmark; InterfaceDDGBindInnerJob; InterfaceDDGBindJobInputter; InterfaceDDGMover; InterfaceDDGMutationTask; InterfaceFeaturesTests; InterfaceHit; InterfaceHitComparitor; InterfaceHitDatabase; InterfaceStrandFinderMover; interp_range (numeric::interpolation::spline); InterpolatedPotential (numeric::interpolation); Interpolator (numeric::interpolation::spline); IntervalSet (numeric); IntervalSet_Double (numeric); InverseRotlibDumpMover; IO (pyrosetta.distributed.cluster.io); IOError (utility::excn); IOTraits (numeric); IOTraits< double > (numeric); IOTraits< float > (numeric); IOTraits< int > (numeric); IOTraits< long double > (numeric); IOTraits< long int > (numeric); IOTraits< short int > (numeric); IOTraits< unsigned int > (numeric); IOTraits< unsigned long int > (numeric); IOTraits< unsigned short int > (numeric); irstream (utility::io); is_back_insert_iterator (detail); is_back_insert_iterator< std::back_insert_iterator< Container > > (detail); is_char; is_char< char >; is_char< char16_t >; is_char< char32_t >; is_char< detail::char8_type >; is_char< wchar_t >; is_compile_string; is_compiled_string (detail); is_contiguous; is_contiguous< basic_memory_buffer< T, SIZE, Allocator > >; is_contiguous< std::basic_string< Char > >; is_contiguous_back_insert_iterator (detail); is_contiguous_back_insert_iterator< buffer_appender< Char > > (detail); is_contiguous_back_insert_iterator< std::back_insert_iterator< Container > > (detail); is_integral (detail); is_integral< int128_t > (detail); is_integral< uint128_t > (detail); is_like_std_string (detail); is_like_std_string< fmt::basic_string_view< Char > > (detail); is_named_arg (detail); is_named_arg< named_arg< Char, T > > (detail); is_output_iterator (detail); is_output_iterator< It, T, void_t< typename std::iterator_traits< It >::iterator_category, decltype(*std::declval< It >()=std::declval< T >())> > (detail); is_range; is_range_ (detail); is_range_< T, conditional_t< false, conditional_helper< decltype(std::declval< T >().begin()), decltype(std::declval< T >().end())>, void > > (detail); is_reference_wrapper (detail); is_reference_wrapper< std::reference_wrapper< T > > (detail); is_streamable (detail); is_string (detail); is_string_constructible (utility::type_traits); is_string_constructible< char * > (utility::type_traits); is_string_constructible< char const * > (utility::type_traits); is_string_constructible< char const(&)[]> (utility::type_traits); is_string_constructible< char const(&)[n]> (utility::type_traits); is_string_constructible< char(&)[]> (utility::type_traits); is_string_constructible< char(&)[n]> (utility::type_traits); is_string_constructible< std::string & > (utility::type_traits); is_string_constructible< std::string > (utility::type_traits); is_string_constructible< std::string const & > (utility::type_traits); is_string_constructible< std::string const > (utility::type_traits); is_tuple_like; is_tuple_like_ (detail); is_zero_int (detail); IsctFast; IsLinkUnitInvalid (utility::signals); ITEExpression (numeric::expression_parser); xyzStripeHash::iter_base (numeric::geometry::hashing); xyzStripeHashWithMeta::iter_base (numeric::geometry::hashing); iterator_buffer (detail); iterator_buffer< std::back_insert_iterator< Container >, enable_if_t< is_contiguous< Container >::value, typename Container::value_type > > (detail); iterator_buffer< T *, T > (detail); izstream (utility::io)

K: KDNode (numeric::kdtree); KDPoint (numeric::kdtree); KDPoint_MinDist (numeric::kdtree); KDPointList (numeric::kdtree); KDTree (numeric::kdtree); KeepSameFile (options); Kernel; Key (utility::keys); key (utility::keys::lookup); Key2Tuple (utility::keys); Key2Vector (utility::keys); Key3Tuple (utility::keys); Key3Vector (utility::keys); Key4Tuple (utility::keys); Key4Vector (utility::keys); KeyCount (utility::keys); KeyError (utility::excn); KeyFArray1D (ObjexxFCL); KeyFArray2D (ObjexxFCL); KeyFArray3D (ObjexxFCL); KeyFArray4D (ObjexxFCL); KeyFArray5D (ObjexxFCL); KeyFArray6D (ObjexxFCL); KeyLess (utility::keys); KeyLookup (utility::keys); KeyMapTraits (utility::keys); KeySetTraits (utility::keys); KeyVector (utility::keys); KeyVectorTraits (utility::keys); KHSandbox; khSandbox; khSandbox2; KicSandbox (apps::pilot); KinFunGroupTK; KinRotSel; kiss_dct_state (numeric::fourier); kiss_fft_state (numeric::fourier); kiss_fftnd_state (numeric::fourier); kiss_fftndr_state (numeric::fourier); kiss_fftr_state (numeric::fourier); kiss_fftsplit_state (numeric::fourier); KRSQuery

L: latticeHit; LDConverterMover; LengthScoreMethod (test.Workshop9_my_shapes); File::LessFileSP (ui::task); LexicographicalIterator (utility); LibraryJumpSetup (protocols::jumping); LigandBaseProtocol (protocols::ligand_docking); LigandDockBenchmark; LigandDockingHbondsReporter; LigandRepackMinimizeProtocol; LigChiMover; xyzTransform::Line (numeric); LinearFunction (numeric::interpolation::spline); Link; Link (utility::signals); LinkUnit (utility::signals); list_element (utility); ListFilter; LiteralExpression (numeric::expression_parser); LiteralToken (numeric::expression_parser); lm_control_struct (numeric::nls); lm_status_struct (numeric::nls); LMAX; LoadMembraneMover; LoadPDBTest (test.T010_LoadPDB); local_minimum; locale_ref (detail); LocalRmsd; LoggerMixin (pyrosetta.distributed.utility.log); LoggingContext (pyrosetta.distributed.utility.log); LoggingSupport (pyrosetta.distributed.cluster.logging_support); LoggingTest (pyrosetta.tests.distributed.cluster.test_logging); LogRecordRequestHandler (pyrosetta.distributed.cluster.logging_listeners); LoopHash_Analyze; LoopHashRelax_Sampler; LowMemEdge (utility::graph); LowMemEdgeListConstIter (utility::graph); LowMemEdgeListIter (utility::graph); LowMemGraph (utility::graph); LowMemGraphBase (utility::graph); LowMemNode (utility::graph); LT_Expression (numeric::expression_parser); LTE_Expression (numeric::expression_parser)

M: MainWindow; make_integer_sequence (detail); make_integer_sequence< T, 0, Ns... > (detail); make_unsigned_or_bool (detail); make_unsigned_or_bool< bool > (detail); make_unsigned_or_unchanged (detail); make_unsigned_or_unchanged< T, true > (detail); MakeCanonicalHelix; MakeSegmentFile (apps::pilot::frankdt); MakeSegmentFileMPI; Mammal; map_binder (binder); MaskedBytes (pyrosetta.distributed.cluster.logging_listeners); MAT; MatchAligner; MatchAlignInfo; MatchArgs; MatchBase; MatchLig; MatchSet; MathMatrix (numeric); MathNTensor (numeric); MathNTensorBase (numeric); MathTensor (numeric); MathVector (numeric); Matrix; Matrix (PyMOL-Rosetta-relay-client); Matrix (PyMOL-RosettaServer); Matrix (pyrosetta.PyMOLRosettaServer); MaxExpression (numeric::expression_parser); MembraneDockingxMover; MembraneMinMover; MembraneRelaxMover; MembraneSampleMover; MembraneSfxnMover; MembraneTransformMover; MembraneViewMover; MemTracer (basic); MemTracerImpl (basic); MessageListener (basic::mpi); MessageListenerFactory (basic::mpi); xyzStripeHashWithMeta::meta_iterator (numeric::geometry::hashing); MetalSiteFinderMover; MetaMaxExpression (numeric::expression_parser); MetaMinExpression (numeric::expression_parser); Methods; MetricValue (basic); MetricValueBase (basic); MikeLinkerMover; MinCenrotMover; MinExpression (numeric::expression_parser); MinimalClashHash (numeric::geometry::hashing); Minimize; MinimizerBenchmark; MinPackMin; MinPackMinMover; MinTestMover; MinToolMover; MirrorSymmTest; Mode; ModSelector (numeric); ModSelector (ObjexxFCL); ModSelector< T, true > (numeric); ModSelector< T, true > (ObjexxFCL); ModuloSelector (numeric); ModuloSelector (ObjexxFCL); ModuloSelector< T, true > (numeric); ModuloSelector< T, true > (ObjexxFCL); monostate; Motif (apps::pilot::frankdt); MotifDock; MotifScanMover; Move (schema); Mover (protocols::moves); MoverApplyingMover (protocols::moves); MoverDocs (pyrosetta.distributed.docs); MoveStatsWindow (job_manager); MoveThenFixH; MoveThenFixHMin; MPDomainAssembly; MPFindInterfaceTestMover; MPFoldingMover; MPframeworkTest1Mover; MPframeworkTestMover; MPI_LoopHash_Launcher; MPI_Refinement_Launcher; MPInterfaceStatistics; MPScoreFunctionFingerprintMover; MsgpackHmacSocketHandler (pyrosetta.distributed.cluster.logging_handlers); mt19937_RG (numeric::random); mtransferase; Multi_pass_iters (utility::json_spirit); MultiDimensionalHistogram (numeric); Multifunc (core::optimization); MultioutputRosettaScriptsTask (pyrosetta.distributed.tasks.rosetta_scripts); MultipleClientsTest (pyrosetta.tests.distributed.cluster.test_smoke); MultiplyExpression (numeric::expression_parser); MultiSocketHandler (pyrosetta.distributed.cluster.logging_handlers); MultistateAggregateFunction (devel::pack_daemon); MultiTemplateAlignChunkMover (apps::pilot); MutableCache (utility::thread); MutantModeler (mutant_modeler); Mutate1Randomizer; My_New_Mover (test.T850_SubClassing); MyApp; MyAtom; MyCI1B; MyCI1B_Creator; MyCI1B_Method (test.T860_SubClassing_EnergyMethods); MyCircle (test.Workshop9_my_shapes); MyFeaturesReporter; myMC; MyMover; MyNewCI1B (test.T850_SubClassing); MyNewCI1B_Creator (test.T850_SubClassing); MyProtocol; MyPyTracer (test.T007_TracerIO); MyRotMover; MyRT; MyScoreMover; MyShape (test.Workshop9_my_shapes); MySlideMover; MySquare (test.Workshop9_my_shapes); MyTransMover

N: n_key (utility::keys::lookup); named_arg (detail); named_arg_info (detail); named_arg_value (detail); NaryExpression (numeric::expression_parser); NativeEnsemble; NBuriedUnsatsCalcultor; NBuriedUnsatsCalcultorCreator; NCMinimize; NearestSelector (numeric); NearestSelector (ObjexxFCL); NearestSelector< R, T, true > (ObjexxFCL); NearestSelector< R, T, true > (numeric); dynamic_format_arg_store::need_copy; NegSpaceElement (utility::graph); NetworkCall (ui::task); NoClient (utility::keys); dynamic_arg_list::node (detail); Node (ui::task); TreeNodeModel::Node (ui::util); Node (utility::graph); node_data; NodeTest; NonceHistogram; NotExpression (numeric::expression_parser); NPDPropCalculator (protocols::pack_daemon); NPDPropCalculatorCreator (protocols::pack_daemon); NT (self-test); null (detail); Null (utility::json_spirit); null_bfs_prune_visitor (utility::graph); dynamic_formatter::null_handler; NullFilter; NullKinematicPerturber; NullPointerError (utility::excn); NullResourceLocator (basic::resource_manager::locator); NullResourceLocatorCreator (basic::resource_manager::locator); NullStream (basic::resource_manager::locator); numeric_specs_checker (detail); NumericTraits (numeric); NumericTraits< double > (numeric); NumericTraits< float > (numeric); NumericTraits< long double > (numeric); NumpyCache (schema)

P: p (numeric::kinematic_closure); PackedPose (pyrosetta.distributed.packed_pose.core); Packing_energies; PackingAngle; Pair_impl (utility::json_spirit); PairComparator; PairDistance; PairScore; formatter< std::chrono::duration< Rep, Period >, Char >::parse_range; ParseIterations (kic_runner); part_counter (detail); PathArgument (ui::network); PathFinder; PathName (utility::file); PathologicalKinematicPerturber; PathOption (utility::options); PathOptionKey (utility::options); PathVectorOption (utility::options); PathVectorOptionKey (utility::options); PausableSignalHub (utility::signals); PBPotentialMover; PcaEvaluator (protocols::abinitio); PDB_IOBenchmark; pdbline; pep_coord_cst; PepMinMover; PeptiodMovieMover; PeptoidDesignMover; PeptoidDihedralGrabber; PeptoidRotamerRecoverer; PerformanceBenchmark; Permute (basic::sampling::orientations); Perturbers1; Perturbers2; PerturbStruct; PhDocking; PhiNByXDegreesMover (test.Workshop9_my_shapes); PhProtocol; PickBAB; PickSSE; xyzTransform::Plane (numeric); PlanePoints (PyMOL-Rosetta-relay-client); PlanePoints (PyMOL-RosettaServer); PlanePoints (pyrosetta.PyMOLRosettaServer); Plog (pyrosetta.distributed.utility.log); PNode (ui::task); POD1; POD2; POD3; POD4; POD5; POD6; Point (numeric::interpolation::spline); PointerKeyLess (utility::keys); Pointers_and_References; pointGroupHit; PolycubicSpline (numeric::interpolation::spline); PolycubicSpline< 1 > (numeric::interpolation::spline); PolycubicSpline< 2 > (numeric::interpolation::spline); PolycubicSplineBase (numeric::interpolation::spline); Polynomial_1d (numeric); Pose (core::pose); PoseAndData; PoseCacheAccessor (pyrosetta.bindings.scores.core); PoseCacheAccessorBase (pyrosetta.bindings.scores.base); PoseEditor (ui::widgets); PoseEvaluator; PosePyObserver; PoseResidueAccessor (pyrosetta.bindings.pose); PoseResidueLabelAccessor (pyrosetta.bindings.pose); PoseResidueLabelMaskAccessor (pyrosetta.bindings.pose); PoseScoreAccessor (pyrosetta.bindings.pose); PoseScoreSerializer (pyrosetta.bindings.scores.serialization); PoseScoreSerializerBase (pyrosetta.bindings.scores.serialization); PoseWrap; PositionSpecificRandomizer (protocols::genetic_algorithm); PR_PyMOLServer (PyMOL-Rosetta-relay-client); PR_PyMOLServer (PyMOL-RosettaServer); PR_PyMOLServer (pyrosetta.PyMOLRosettaServer); PR_UDPServer (PyMOL-Rosetta-relay-client); PR_UDPServer (PyMOL-RosettaServer); PR_UDPServer (pyrosetta.network.rosetta_udp_to_tcp_bridge); PR_UDPServer (pyrosetta.PyMOLRosettaServer); precision_adapter (detail); precision_checker (detail); predicate_cmp_filename (utility); PreformattedDescFormatter (arls_impl); PrimaryKey (basic::database::schema_generator); printf_arg_formatter; printf_formatter; printf_precision_handler (detail); printf_width_handler (detail); PrintFeatures; PrintPDDF; PrintSequenceMover; ProfileThis (basic); ProgressLogger (pyrosetta.distributed.utility.log); Project (ui::task); ProjectModel (ui::task); ProjectTasksModel (ui::task); ProjectView (ui::task); Protocol_MolecularDynamics; ProxySentinel (ObjexxFCL::internal); pseudoCA; pseudoCAbond; PseudoCAMultifunc; pseudoTrace; pseudoTraceRecords; Py_xyzTransform_double (numeric); PyCallBack_A2; PyCallBack_A3; PyCallBack_A4; PyCallBack_aaa_A_double_t; PyCallBack_Animal_1_t; PyCallBack_Base; PyCallBack_Delete; PyCallBack_Derived; PyCallBack_Dog_1_t; PyCallBack_Mammal_1_t; PyCallBack_n1_A; PyCallBack_n1_n2_A; PyCallBack_X; PyExitCallback (utility::py); PyJobDistributor (pyrosetta.toolbox.py_jobdistributor); PyOverloadTest (test.T850_SubClassing); PyRosettaCluster (pyrosetta.distributed.cluster.core); PyRosettaDistribution (setup); PyRosettaException (pyrosetta); PythonLoggingSink (pyrosetta.logging_support); PythonPyExitCallback (pyrosetta); PyTracer (basic); PyTracer (rosetta.basic); PyValue (test.T850_SubClassing)

R: RamaTestMover; RandomGenerator (numeric::random); RandomGeneratorSettings (basic::random); RangeError (utility::excn); RawType (utility); RawType< T & > (utility); RawType< T * > (utility); RDCScoreMover; RDCToolMover; RDF_Mover; RealOption (utility::options); RealOptionKey (utility::options); RealVectorOption (utility::options); RealVectorOptionKey (utility::options); recent_history_queue (utility); RECONMPIJobDistributor (protocols::jd2); RecursiveASTVisitor; Registrant (utility::factory); RelaxCDRsMover; RelaxJobQueen; RemainderSelector (numeric); RemainderSelector (ObjexxFCL); RemainderSelector< T, true > (numeric); RemainderSelector< T, true > (ObjexxFCL); RepackCenrotMover; RepackMinCenrotMover; RepFunc; format_part::replacement (detail); Report (basic); Reporter (basic); RerootEdgeSorter; RerootRestypeVisitor; RescoreCenrot; RescorePDDF; RescoreSAXS; ReservoirSampler (numeric::random); Residue (sidechain_cst_3); ResidueChainVectorOption (utility::options); ResidueChainVectorOptionKey (utility::options); ResidueLabelAccessor (pyrosetta.bindings.pose); ResourceLoader (basic::resource_manager); ResourceLoaderCreator (basic::resource_manager); ResourceLoaderFactory (basic::resource_manager); ResourceLoaderRegistrator (basic::resource_manager); ResourceLocator (basic::resource_manager); ResourceLocatorCreator (basic::resource_manager); ResourceLocatorFactory (basic::resource_manager); ResourceLocatorRegistrator (basic::resource_manager); ResourceManager (basic::resource_manager); ResourceManagerCreator (basic::resource_manager); ResourceManagerFactory (basic::resource_manager); ResourceManagerRegistrator (basic::resource_manager); ResourceOptions (basic::resource_manager); ResourceOptionsCreator (basic::resource_manager); ResourcesTest (pyrosetta.tests.distributed.cluster.test_smoke); ResourceStream (basic::resource_manager); ResRotPair (basic::datacache); ResRotPairHasher (basic::datacache); Results_Keeper; rgb; RingDetection (utility::graph); RingEdgeAnnotationVisitor (utility::graph); RingSizeVisitor (utility::graph); RMS_ScoringScheme; RMSByResStatistics; rmsd_calc (numeric::alignment); RmsData (numeric::model_quality); RmsfMover; RNA_ScoreMover; RocCurve (numeric); RocPoint (numeric); RosettaBackend; RosettaHolesMover; RosettaInstance (nacl_rosetta); RosettaJob; RosettaModule (nacl_rosetta); RosettaScriptsOptionError (utility::excn); RosettaTensorflowManager (basic::tensorflow_manager); RosettaTensorflowProtocolBase (basic::tensorflow_manager); RosettaTensorflowTensorContainer (basic::tensorflow_manager); RosettaThreadAllocation (basic::thread_manager); RosettaThreadAssignmentInfo (basic::thread_manager); RosettaThreadManager (basic::thread_manager); RosettaThreadManagerAdvancedAPIKey (basic::thread_manager); RosettaThreadManagerInitializationTracker (basic::thread_manager); RosettaURLFileHandler (nacl_rosetta); RotamerAssigningAnnealer; RotateSAXS; RotSel; FileTableModel::Row (ui::task); ProjectTasksModel::Row (ui::task); RowData (basic::database::insert_statement_generator); RowDataBase (basic::database::insert_statement_generator); RowPointers (numeric); RowsPointer (numeric); RowVectors (numeric); RTminOptMultifunc; run_score_hotspot; run_score_patchdock_hotspot; RuntimeTest (pyrosetta.tests.distributed.cluster.test_smoke); RuntimeTestLoggingFilter (pyrosetta.tests.distributed.cluster.test_smoke)

S: S; SameResidueTypeConstraint; SampleSecondaryStructureAlignmentMover (apps::pilot); SampleTiltProtocol; SamplingManager; Sasa; sasa_qdMover; SaveAllTest (pyrosetta.tests.distributed.cluster.test_smoke); SaveMovie (job_manager); ScalarOption (utility::options); ScalarOption_T_ (utility::options); ScalarOptionKey (utility::options); Scheduler (myspace); SchedulerManager (pyrosetta.distributed.cluster.utilities); Schema (basic::database::schema_generator); ScMinMover; ScoreAnalyticEtableBenchmark; ScoreBenchmark; ScoreBreakdown; ScoreEachBenchmark; ScoreFileView (ui::viewers); ScoreFragInfo; ScoreFragmentSetMover; ScoreFunctionFingerprintMover; ScoreMover; ScorePoseTask (pyrosetta.distributed.tasks.score); ScoresTest (pyrosetta.tests.distributed.cluster.test_smoke); ScoreVsRmsd (job_manager); ScoreVsTime (job_manager); ScoringScheme (core::sequence); ScTrials; SecondaryStruct (apps::pilot::frankdt); SecondaryStructureChunk; SecretInputDialog (PyMOL-Rosetta-relay-client); segment_file_generator (apps::pilot::frankdt); Semantic_actions (utility::json_spirit); SeqBBTorSRFD; Sequence (core::sequence); SequenceCoords; SequenceProfileDB; SerializablePose; Serialization (pyrosetta.distributed.cluster.serialization); SerializationTest (pyrosetta.tests.distributed.cluster.test_smoke); ServerInfo; session (utility::sql_database); setBackgroundColor (pyrosetta.distributed.viewer.modules); setDisulfides (pyrosetta.distributed.viewer.modules); setHydrogenBonds (pyrosetta.distributed.viewer.modules); setHydrogens (pyrosetta.distributed.viewer.modules); SetOfClusters; SetProtocolNameFilter (pyrosetta.distributed.cluster.logging_filters); SetSocketAddressFilter (pyrosetta.distributed.cluster.logging_filters); setStyle (pyrosetta.distributed.viewer.modules); setSurface (pyrosetta.distributed.viewer.modules); SetTaskIdFilter (pyrosetta.distributed.cluster.logging_filters); SetupHotspotMover; SetupMover; SetWrapper (ObjexxFCL); setZoom (pyrosetta.distributed.viewer.modules); setZoomTo (pyrosetta.distributed.viewer.modules); SharedThreadLocalData (utility::thread); ShearMoverBenchmark; Show (utility); ShowViolation (protocols::abinitio); SHT (numeric::fourier); SignalHub (utility::signals); SilentFileEnergyAccessor (pyrosetta.io.silent_file_map); SilentFileMap (pyrosetta.io.silent_file_map); SilentFilePoseAccessor (pyrosetta.io.silent_file_map); SilentProlineFixMover; SimpleBBMover; SimpleComparison; SimpleCstMover (protocols::moves); SimpleDGBindAggregateFunction; SimpleExpressionCreator (numeric::expression_parser); SimpleInterpolator (numeric::interpolation::spline); SimpleMetricCompositeRealDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricCompositeStringDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricDataAccessorBase (pyrosetta.bindings.scores.simple_metrics); SimpleMetricPerResidueProbabilitiesDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricPerResidueRealDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricPerResidueStringDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricRealDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimpleMetricStringDataAccessor (pyrosetta.bindings.scores.simple_metrics); SimplePoseDrawOpenGLWidget (ui::ui_core::pose_draw); SimpleRange1 (utility); SimpleToken (numeric::expression_parser); SimulateCryoMover; SimulateMPI (utility); SimulateMPIData (utility); SimulateMPIMessage (utility); SingleInterface; SingleLinkClusterer (numeric); SingleoutputRosettaScriptsTask (pyrosetta.distributed.tasks.rosetta_scripts); SingletonBase (utility); SixDCoordinateBinner (numeric::geometry::hashing); SixDOffsetTree (numeric::geometry::hashing); Skip (ObjexxFCL::format); SleepForATenthOfASecond; SlideTask; small_vector (boost::container); small_vectorL (utility); SmallKeyMap (utility::keys); SmallKeyVector (utility::keys); SmallMoverBenchmark; SmartSEWINGTester (apps::pilot::frankdt); SmokeTest (pyrosetta.tests.distributed.cluster.test_smoke); SmokeTestDistributed (pyrosetta.tests.distributed.test_smoke); SmokeTestMulti (pyrosetta.tests.distributed.cluster.test_smoke); SmoothFragRepackMover; SO3coeffs (numeric::fourier); SocketAddressFilter (pyrosetta.distributed.cluster.logging_filters); SocketHandler (logging.handlers); SocketListener (pyrosetta.distributed.cluster.logging_listeners); SocketLoggerPlugin (pyrosetta.distributed.cluster.worker_plugins); Solver::SolutionInfo; SolutionRescoreMover; Solver; Solver_NU; SomeThing; SomeThingGetter; Son; sort_minima_by_scores; SortFirst (utility); SortSecond (utility); Spacegroup; SpacegroupHit; SpartaSuperDeviationMover; formatter< std::chrono::duration< Rep, Period >, Char >::spec_handler; SpecificJumpSetup (protocols::jumping); specs_checker (detail); specs_handler (detail); specs_setter (detail); SphereNode; SphereSample; SphereSampler; sphericalVector (numeric); SplineGenerator (numeric::interpolation::spline); SplineParameters (numeric); DietNode::split_tuple (numeric); SquarerootExpression (numeric::expression_parser); SSM_energies; st2 (variadic_template); Stage1Sampler (protocols::abinitio); standard_RG (numeric::random); StandardJobQueen (protocols::jd3); Star (ObjexxFCL); StartUpError (PyMOL-Rosetta-relay-client); StartUpError (PyMOL-RosettaServer); StartUpError (pyrosetta.network.rosetta_udp_to_tcp_bridge); StartUpError (pyrosetta.PyMOLRosettaServer); StatefulMover; StaticIndexRange (ObjexxFCL); StatusWindow (job_manager); std_string_view (detail); StepWiseJobQueen; StepwiseTorsionMover; steric_fusion_scan (apps::pilot::frankdt); Stream_reader (utility::json_spirit); Stream_reader_thrower (utility::json_spirit); string_value (detail); StringArgument (ui::network); stringifier (detail); Stringifier (utility_exit_detail); StringOption (utility::options); StringOptionKey (utility::options); StringResourceStream (basic::resource_manager::locator); StringVectorOption (utility::options); StringVectorOptionKey (utility::options); Stringy (utility_exit_detail); StrongT (utility); StructureConfidence; StructureSearchManager (pyrosetta.protocols.structure_search); subset_mapping (utility); SubtractExpression (numeric::expression_parser); SuperDeviationMover; SVC_Q; SVD_Solver (basic::svd); svm_model; svm_node; Svm_node_rosetta (utility::libsvm); svm_parameter; svm_problem; Svm_rosetta (utility::libsvm); SVR_Q; SwapElementsMover1; SwapElementsMover2; SymFixbbMover; SymRBMover; system_error

T: T; T (aaaa); Tag (utility::tag); Tags; TarFileHeader (utility::io); TarParser (utility::io); Task (ui::task); TaskBase (pyrosetta.distributed.cluster.base); TaskBase (pyrosetta.distributed.tasks.taskbase); TaskCancelDialog (ui::task); TaskSubmit (ui::task); TaskSyncer_NodeStrategy (ui::task); TaskSyncer_TaskStrategy (ui::task); TaskView (ui::task); TCDock; Temperature (schema); TemplateSpecialization; TempStruct (numeric::interpolation); TempStruct< T, 1 > (numeric::interpolation); Tensor; test_my_struct (testers); test_stream (detail); TestAlignment (pyrosetta.tests.numeric.test_alignment); TestBase (pyrosetta.tests.distributed.cluster.test_smoke); TestConcurrentScripts (pyrosetta.tests.distributed.test_concurrency); TestDaskArgs (pyrosetta.tests.distributed.test_dask_worker); TestDaskDistribution (pyrosetta.tests.distributed.test_dask); TestGIL (pyrosetta.tests.distributed.test_gil); TestJD2Mover; TestMMOP; TestPoseCacheAccessor (pyrosetta.tests.bindings.core.test_pose); TestPoseIO (pyrosetta.tests.bindings.core.test_pose); TestPoseResidueAccessor (pyrosetta.tests.bindings.core.test_pose); TestPoseResidueLabelAccessor (pyrosetta.tests.bindings.core.test_pose); TestPoseScoresAccessor (pyrosetta.tests.bindings.core.test_pose); TestPosesToSilent (pyrosetta.tests.bindings.core.test_pose); TestPyJobDistributor (test.T300_PyJobDistributor); TestQuickRelaxMover; TestReproducibility (pyrosetta.tests.distributed.cluster.test_reproducibility); TestReproducibilityMulti (pyrosetta.tests.distributed.cluster.test_reproducibility); TestResidueSelectors (test.T121_core); TestStructureSearch (pyrosetta.tests.protocols.indexed_structure_store.test_search); TestViewer (pyrosetta.tests.distributed.test_viewer); Tet4HMatchAligner; text_style; TFDataTypeDetector (basic::tensorflow_manager); TFDataTypeDetector< bool > (basic::tensorflow_manager); TFDataTypeDetector< double > (basic::tensorflow_manager); TFDataTypeDetector< float > (basic::tensorflow_manager); TFDataTypeDetector< int > (basic::tensorflow_manager); TFDataTypeDetector< long int > (basic::tensorflow_manager); TFDataTypeDetector< unsigned int > (basic::tensorflow_manager); TFDataTypeDetector< unsigned long int > (basic::tensorflow_manager); ThisApplication; ThreadingMover (protocols::comparative_modeling); Timer (basic::gpu); TNM; Token (numeric::expression_parser); TokenHub (utility::signals); TokenSet (numeric::expression_parser); TorsionList; TorsionVectorMover; TorsionVsTime (job_manager); Tracer (basic); TracerImpl (basic); TracerOptions (basic); Tracer::TracerProxy (basic); TracerImpl::TracerProxyImpl (basic); TracerToFile (basic); Trajectory (schema); transaction (utility::sql_database); TransactionMode (utility::sql_database); TreeNodeModel (ui::util); TriazoleCreator; TricubicSpline (numeric::interpolation::spline); Triple (basic::sampling::orientations); TrizaolamerDockDesignMinimizeMover; truncating_iterator (detail); truncating_iterator< OutputIt, std::false_type > (detail); truncating_iterator< OutputIt, std::true_type > (detail); truncating_iterator_base (detail); TryScoreFilter; tuple_arg_join; TwoChainInterface; TwoChainTenANeighbors; TwoDHistogram (numeric::histograms); type_constant (detail); type_identity; Type_to_type (utility::json_spirit::internal_); dynamic_arg_list::typed_node (detail); TypeError; TypeTraits (ObjexxFCL); TypeTraits< double > (ObjexxFCL); TypeTraits< float > (ObjexxFCL); TypeTraits< int > (ObjexxFCL); TypeTraits< long double > (ObjexxFCL); TypeTraits< long int > (ObjexxFCL); TypeTraits< short int > (ObjexxFCL); TypeTraits< unsigned int > (ObjexxFCL); TypeTraits< unsigned long int > (ObjexxFCL); TypeTraits< unsigned short int > (ObjexxFCL)

U: UBQ_E2Mover; UBQ_GTPase_disulfide_Mover; ubyte (ObjexxFCL); UEEdge (utility::graph); UEVertex (utility::graph); ui_lib_test (ui); uint128_t (detail); uint128_wrapper (detail); UnaryExpression (numeric::expression_parser); unformattable (detail); uniform_RG (numeric::random); UniformPerturber; UniformRotationSampler (numeric); UniqueConstraint (basic::database::schema_generator); unordered_object_pool (boost); UnpublishedModuleAuthor (basic::citation_manager); UnpublishedModuleInfo (basic::citation_manager); Updater (ui::task); UpperEdgeGraph (utility::graph); urs_Quat (numeric); UserCorrectableIssue (utility::excn); UserCredentials (ui::config); UserKey (utility::keys); UserWarning; xyzStripeHash::ushort2 (numeric::geometry::hashing); xyzStripeHashWithMeta::ushort2 (numeric::geometry::hashing); utf8_to_utf16 (detail); utility_vector_binder (rosetta_binders); UtilityExitException (utility)

V: VallIndex; VallReader; format_part::value (detail); value (detail); Value (rosetta.utility.py); Value (utility::py); arg_ref::value (detail); Value_impl (utility::json_spirit); counting_iterator::value_type (detail); VariableExpression (numeric::expression_parser); VariableToken (numeric::expression_parser); Value_impl::Variant_converter_visitor (utility::json_spirit); VariantKey (utility::keys); VariantOption (utility::options); VarLengthBuildKristin; VBWrapper (utility); VEC; VecContains; VecLen; VecMaxElement; VecMean; VecMinElement; vector0 (utility); vector0< bool, A > (utility); vector1 (utility); vector1< bool, A > (utility); vector_binder (binder); vectorL (utility); vectorL< L, bool, A > (utility); vectorL_IndexSelector (utility); vectorL_IndexSelector< false > (utility); vectorL_ZeroSelector (utility); vectorL_ZeroSelector< false > (utility); VectorOption (utility::options); VectorOption_T_ (utility::options); VectorOptionKey (utility::options); Version (utility); view (detail); Viewer (pyrosetta.distributed.viewer.core); ViewerInputError (pyrosetta.distributed.viewer.core); ViewerInputError (pyrosetta.distributed.viewer.modules); ViewMembraneProteinMover; VirtualBase (utility); VirtualBase; void_t_impl (detail); VoxelArray (numeric); VoxelGrid (numeric)

X: X; XFORM; XformHash32 (numeric); XformHash64 (numeric); Xforms (numeric); XMLErrorHandler (utility::tag); XMLParseBenchmark; XMLprinterMover; XMLSchemaAttribute (utility::tag); XMLSchemaComplexType (utility::tag); XMLSchemaComplexTypeGenerator (utility::tag); XMLSchemaComplexTypeGeneratorImpl (utility::tag); XMLSchemaDefinition (utility::tag); XMLSchemaElement (utility::tag); XMLSchemaModelGroup (utility::tag); XMLSchemaParticle (utility::tag); XMLSchemaRepeatableCTNode (utility::tag); XMLSchemaRestriction (utility::tag); XMLSchemaSimpleSubelementList (utility::tag); XMLSchemaTopLevelElement (utility::tag); XMLSchemaType (utility::tag); XMLValidationOutput (utility::tag); XMLValidator (utility::tag); XMLValidatorImpl (utility::tag); xtal_water_bunsat; XYZ; xyzStripeHashWithMeta::xyz_iterator (numeric::geometry::hashing); XYZCoord (pyrosetta.PyMOLRosettaServer); XYZCoord (PyMOL-RosettaServer); XYZCoord (PyMOL-Rosetta-relay-client); xyzMatrix (numeric); xyzStripeHashWithMeta::xyzmeta_iterator (numeric::geometry::hashing); xyzStripeHash (numeric::geometry::hashing); xyzStripeHashWithMeta (numeric::geometry::hashing); xyzStripeHashWithMeta; xyzStripeHashWithMeta_float (numeric::geometry::hashing); xyzTransform (numeric); xyzTriple (numeric); xyzVector (numeric)

Y: Y; YamlEmitter (basic)

Z: ZF_PatchupMover; zinc1_homodimer_design; zinc1_homodimer_setup; zinc2_homodimer_design; zinc2_homodimer_setup; zinc_helix_cap; ZincMatchFilter; ZincMinimize; ZincSiteEvaluator; ZincStatisticGenerator (zinc_stats)

_: S::_D; _S2