Rosetta
Classes | Namespaces | Functions | Variables
__init__.py File Reference

Classes

class  pyrosetta.PyRosettaException
 Exception handling. More...
 
class  pyrosetta.PythonPyExitCallback
 
class  pyrosetta.EnergyMethod
 

Namespaces

 pyrosetta
 

Functions

def pyrosetta._rosetta_database_from_env ()
 
def pyrosetta._is_interactive ()
 
def pyrosetta.init (options='-ex1 -ex2aro', extra_options='', set_logging_handler=None, notebook=None, silent=False)
 
def pyrosetta._version_string ()
 
def pyrosetta.version ()
 
def pyrosetta._vector_extend_func (vec, othervec)
 Vector compatibility: Adding 'extend' to all utility.vector* functions. More...
 
def pyrosetta.Vector1 (list_in)
 
def pyrosetta.Set (list_in)
 
def pyrosetta.generate_nonstandard_residue_set (pose, params_list)
 New methods. More...
 
def pyrosetta.standard_task_factory ()
 
def pyrosetta.standard_packer_task (pose)
 
def pyrosetta.defineEnergyMethodCreator (class_, scoreType)
 

Variables

 pyrosetta.vector1_string
 
 pyrosetta.list_std_shared_ptr_core_pack_task_operation_TaskOperation_std_allocator_std_shared_ptr_core_pack_task_operation_TaskOperation_t
 
 pyrosetta.vector_std_vector_double_std_allocator_double_t
 
 pyrosetta.set_std_string_std_less_std_string_std_allocator_std_string_t
 
 pyrosetta.logger = logging.getLogger("pyrosetta.rosetta")
 
 pyrosetta.extend
 
list pyrosetta._mem_EnergyMethods_ = []
 Decorator generation for custom PyRosetta energy methods. More...
 
list pyrosetta._mem_EnergyCreators_ = []
 
 pyrosetta.CD = namedtuple("CD", "base first last methods")
 
list pyrosetta._ScoreTypesRegistryByType_
 
dictionary pyrosetta.ScoreTypesRegistry = {}