pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase Class Reference

Inheritance diagram for pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase:

Public Member Functions
def	__init__ (self, pose)
def	__getitem__ (self, key)
def	__setitem__ (self, key, value)
def	__delitem__ (self, key)
def	clear (self)
Public Member Functions inherited from pyrosetta.bindings.scores.base.PoseCacheAccessorBase
def	apply (self, metric, key, value)
def	__len__ (self)
def	__iter__ (self)
def	__str__ (self)

Static Private Attributes
tuple	__slots__ = ("pose",)

Additional Inherited Members
Static Public Member Functions inherited from pyrosetta.bindings.scores.serialization.PoseScoreSerializer
def	maybe_encode (value)
def	maybe_decode (value)
Static Public Member Functions inherited from pyrosetta.bindings.scores.serialization.PoseScoreSerializerBase
def	to_pickle (value)
def	from_pickle (value)
def	to_base64 (value)
def	from_base64 (value)
def	to_base64_pickle (value)
def	from_base64_pickle (value)
def	bool_from_str (value)
Public Attributes inherited from pyrosetta.bindings.scores.base.PoseCacheAccessorBase
	pose
	custom_real_value_metric
	custom_string_value_metric

Detailed Description

Base methods for accessor wrapper for pose arbitrary extra string scores
and pose arbitrary extra float scores.

Constructor & Destructor Documentation

__init__()

def pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__init__	(		self,
			pose
	)

Reimplemented from pyrosetta.bindings.scores.base.PoseCacheAccessorBase.

Reimplemented in pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor, pyrosetta.bindings.scores.extra_scores.ExtraStringScoresDataAccessor, and pyrosetta.bindings.scores.extra_scores.ExtraFloatScoresDataAccessor.

Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__setstate__().

Member Function Documentation

__delitem__()

def pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__delitem__	(		self,
			key
	)

References pyrosetta.bindings.scores.base.PoseCacheAccessorBase._validate_del(), pyrosetta.tests.distributed.test_dask.format, PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, and test.T300_PyJobDistributor.TestPyJobDistributor.pose.

Referenced by pyrosetta.bindings.pose.PoseScoreAccessor.__setitem__().

__getitem__()

def pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__getitem__	(		self,
			key
	)

References pyrosetta.bindings.pose.PoseScoreAccessor.all(), pyrosetta.bindings.scores.core.PoseCacheAccessor.all(), pyrosetta.bindings.scores.energies.EnergiesAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraFloatScoresDataAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraStringScoresDataAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricCompositeStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricCompositeRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueProbabilitiesDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.all(), ui::task::Node.all, and pyrosetta.bindings.scores.serialization.PoseScoreSerializer.maybe_decode().

__setitem__()

def pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__setitem__	(		self,
			key,
			value
	)

Reimplemented in pyrosetta.bindings.scores.extra_scores.ExtraStringScoresDataAccessor, and pyrosetta.bindings.scores.extra_scores.ExtraFloatScoresDataAccessor.

References pyrosetta.bindings.scores.base.PoseCacheAccessorBase._validate_set(), pyrosetta.tests.distributed.test_dask.format, pyrosetta.bindings.scores.serialization.PoseScoreSerializer.maybe_encode(), PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, test.T300_PyJobDistributor.TestPyJobDistributor.pose, and pyrosetta.bindings.warnings.setPoseExtraScore().

clear()

def pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.clear

(

self

)

Reimplemented in pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor.

References pyrosetta.bindings.pose.PoseScoreAccessor.all(), pyrosetta.bindings.scores.core.PoseCacheAccessor.all(), pyrosetta.bindings.scores.energies.EnergiesAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraFloatScoresDataAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraStringScoresDataAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricCompositeStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricCompositeRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueProbabilitiesDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.all(), ui::task::Node.all, PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, and test.T300_PyJobDistributor.TestPyJobDistributor.pose.

Referenced by pyrosetta.bindings.pose.ResidueLabelAccessor.discard().

Member Data Documentation

__slots__

tuple pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__slots__ = ("pose",)

staticprivate

Referenced by pyrosetta.distributed.cluster.io.IO._get_instance_and_metadata().

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The documentation for this class was generated from the following file:

• src/python/PyRosetta/src/pyrosetta/bindings/scores/extra_scores.py