Rosetta
Variables
basic::options::OptionKeys::cm::hybridize Namespace Reference

Variables

BooleanOptionKey const hybridize
 
IntegerVectorOptionKey const starting_template
 
BooleanOptionKey const realign_domains
 
BooleanOptionKey const realign_domains_stage2
 
IntegerOptionKey const add_non_init_chunks
 
RealOptionKey const stage1_increase_cycles
 
RealOptionKey const stage2_increase_cycles
 
RealOptionKey const stage2min_increase_cycles
 
RealOptionKey const stage1_probability
 
BooleanOptionKey const skip_stage2
 
BooleanOptionKey const no_global_frame
 
BooleanOptionKey const linmin_only
 
IntegerOptionKey const relax
 
RealOptionKey const frag_weight_aligned
 
IntegerOptionKey const max_registry_shift
 
RealOptionKey const frag_1mer_insertion_weight
 
RealOptionKey const small_frag_insertion_weight
 
RealOptionKey const big_frag_insertion_weight
 
BooleanOptionKey const auto_frag_insertion_weight
 
IntegerOptionKey const stage1_1_cycles
 
IntegerOptionKey const stage1_2_cycles
 
IntegerOptionKey const stage1_3_cycles
 
IntegerOptionKey const stage1_4_cycles
 
RealOptionKey const stage2_temperature
 
StringOptionKey const stage1_4_cenrot_score
 
BooleanOptionKey const include_loop_ss_chunks
 

Variable Documentation

◆ add_non_init_chunks

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::add_non_init_chunks
extern

◆ auto_frag_insertion_weight

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::auto_frag_insertion_weight
extern

◆ big_frag_insertion_weight

RealOptionKey const basic::options::OptionKeys::cm::hybridize::big_frag_insertion_weight
extern

◆ frag_1mer_insertion_weight

RealOptionKey const basic::options::OptionKeys::cm::hybridize::frag_1mer_insertion_weight
extern

◆ frag_weight_aligned

RealOptionKey const basic::options::OptionKeys::cm::hybridize::frag_weight_aligned
extern

◆ hybridize

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::hybridize
extern

◆ include_loop_ss_chunks

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::include_loop_ss_chunks
extern

◆ linmin_only

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::linmin_only
extern

◆ max_registry_shift

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::max_registry_shift
extern

◆ no_global_frame

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::no_global_frame
extern

◆ realign_domains

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::realign_domains
extern

◆ realign_domains_stage2

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::realign_domains_stage2
extern

◆ relax

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::relax
extern

◆ skip_stage2

BooleanOptionKey const basic::options::OptionKeys::cm::hybridize::skip_stage2
extern

◆ small_frag_insertion_weight

RealOptionKey const basic::options::OptionKeys::cm::hybridize::small_frag_insertion_weight
extern

◆ stage1_1_cycles

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_1_cycles
extern

◆ stage1_2_cycles

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_2_cycles
extern

◆ stage1_3_cycles

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_3_cycles
extern

◆ stage1_4_cenrot_score

StringOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_4_cenrot_score
extern

◆ stage1_4_cycles

IntegerOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_4_cycles
extern

◆ stage1_increase_cycles

RealOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_increase_cycles
extern

◆ stage1_probability

RealOptionKey const basic::options::OptionKeys::cm::hybridize::stage1_probability
extern

◆ stage2_increase_cycles

RealOptionKey const basic::options::OptionKeys::cm::hybridize::stage2_increase_cycles
extern

◆ stage2_temperature

RealOptionKey const basic::options::OptionKeys::cm::hybridize::stage2_temperature
extern

◆ stage2min_increase_cycles

RealOptionKey const basic::options::OptionKeys::cm::hybridize::stage2min_increase_cycles
extern

◆ starting_template

IntegerVectorOptionKey const basic::options::OptionKeys::cm::hybridize::starting_template
extern