pyrosetta.toolbox.py_jobdistributor.PyJobDistributor Class Reference

Public Member Functions
def	__init__ (self, pdb_name, nstruct, scorefxn, compress=False)
def	job_complete (self)
def	start_decoy (self)
def	output_decoy (self, pose)

Public Attributes
	pdb_name
	nstruct
	compress
	current_id
	current_name
	scorefxn
	native_pose
	additional_decoy_info
	json_format
	sequence
	current_in_progress_name

Constructor & Destructor Documentation

__init__()

def pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.__init__	(		self,
			pdb_name,
			nstruct,
			scorefxn,
			compress = False
	)

Referenced by pyrosetta.distributed.tasks.taskbase.TaskBase.__setstate__().

Member Function Documentation

job_complete()

def pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.job_complete

(

self

)

References ObjexxFCL.len(), SecondaryStructureChunk.sequence(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.sequence.

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

output_decoy()

def pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy	(		self,
			pose
	)

References pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.additional_decoy_info, ObjexxFCL::Cstring.compress(), ObjexxFCL::Fstring.compress(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.compress, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_id, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_in_progress_name, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_name, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.job_complete(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.json_format, ObjexxFCL.len(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.native_pose, pyrosetta.distributed.cluster.core.PyRosettaCluster.nstruct, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.nstruct, ui::task::Task::Job.nstruct, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), pyrosetta.toolbox.py_jobdistributor.output_scorefile(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.pdb_name, erraser_util.remove(), MinimizerBenchmark< sft, TScale >.scorefxn, ExtractATD.scorefxn(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.scorefxn, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.scorefxn, test.T010_LoadPDB.LoadPDBTest.scorefxn, SecondaryStructureChunk.sequence(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.sequence, and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy().

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

start_decoy()

def pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy

(

self

)

References ObjexxFCL::Cstring.compress(), ObjexxFCL::Fstring.compress(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.compress, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_id, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_name, pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.pdb_name, SecondaryStructureChunk.sequence(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.sequence, and str().

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

Member Data Documentation

additional_decoy_info

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.additional_decoy_info

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

compress

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.compress

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy().

current_id

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_id

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy().

current_in_progress_name

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_in_progress_name

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

current_name

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.current_name

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy().

json_format

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.json_format

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

native_pose

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.native_pose

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

nstruct

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.nstruct

Referenced by pyrosetta.distributed.cluster.core.PyRosettaCluster._run(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy().

pdb_name

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.pdb_name

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy().

scorefxn

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.scorefxn

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.test_pose_cache(), and test.T010_LoadPDB.LoadPDBTest.test_roundtrip_scored_pdb().

sequence

pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.sequence

Referenced by pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.job_complete(), pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.output_decoy(), and pyrosetta.toolbox.py_jobdistributor.PyJobDistributor.start_decoy().

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The documentation for this class was generated from the following file:

• src/python/PyRosetta/src/pyrosetta/toolbox/py_jobdistributor.py