basic::options::OptionKeys::chemically_conjugated_docking Namespace Reference

Variables
BooleanOptionKey const	chemically_conjugated_docking
FileOptionKey const	UBQpdb
FileOptionKey const	E2pdb
IntegerOptionKey const	E2_residue
RealOptionKey const	SASAfilter
RealOptionKey const	scorefilter
BooleanOptionKey const	publication
IntegerOptionKey const	n_tail_res
BooleanOptionKey const	two_ubiquitins
FileVectorOptionKey const	extra_bodies
IntegerOptionKey const	UBQ2_lys
FileOptionKey const	UBQ2_pdb
BooleanOptionKey const	dont_minimize_omega
BooleanOptionKey const	pdz
FileOptionKey const	GTPasepdb
IntegerOptionKey const	GTPase_residue

Variable Documentation

chemically_conjugated_docking

BooleanOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::chemically_conjugated_docking

extern

dont_minimize_omega

BooleanOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::dont_minimize_omega

extern

Referenced by UBQ_E2Mover::init_on_new_input().

E2_residue

IntegerOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::E2_residue

extern

Referenced by UBQ_E2Mover::init_on_new_input().

E2pdb

FileOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::E2pdb

extern

Referenced by UBQ_E2Mover::init_on_new_input().

extra_bodies

FileVectorOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::extra_bodies

extern

Referenced by apps::public1::scenarios::chemically_conjugated_docking::add_extra_bodies(), UBQ_E2Mover::analyze_and_filter(), UBQ_GTPase_disulfide_Mover::analyze_and_filter(), UBQ_E2Mover::init_on_new_input(), UBQ_GTPase_disulfide_Mover::init_on_new_input(), and main().

GTPase_residue

IntegerOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::GTPase_residue

extern

Referenced by UBQ_GTPase_disulfide_Mover::init_on_new_input(), and main().

GTPasepdb

FileOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::GTPasepdb

extern

Referenced by UBQ_GTPase_disulfide_Mover::init_on_new_input().

n_tail_res

IntegerOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::n_tail_res

extern

Referenced by UBQ_E2Mover::init_on_new_input(), UBQ_GTPase_disulfide_Mover::init_on_new_input(), and main().

pdz

BooleanOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::pdz

extern

Referenced by UBQ_GTPase_disulfide_Mover::analyze_and_filter().

publication

BooleanOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::publication

extern

Referenced by UBQ_E2Mover::analyze_and_filter(), UBQ_GTPase_disulfide_Mover::analyze_and_filter(), and UBQ_E2Mover::init_on_new_input().

SASAfilter

RealOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::SASAfilter

extern

Referenced by UBQ_E2Mover::analyze_and_filter(), UBQ_GTPase_disulfide_Mover::analyze_and_filter(), and main().

scorefilter

RealOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::scorefilter

extern

Referenced by UBQ_E2Mover::analyze_and_filter(), UBQ_GTPase_disulfide_Mover::analyze_and_filter(), and main().

two_ubiquitins

BooleanOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::two_ubiquitins

extern

Referenced by UBQ_E2Mover::UBQ_E2Mover().

UBQ2_lys

IntegerOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::UBQ2_lys

extern

Referenced by UBQ_E2Mover::init_on_new_input().

UBQ2_pdb

FileOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::UBQ2_pdb

extern

Referenced by UBQ_E2Mover::init_on_new_input().

UBQpdb

FileOptionKey const basic::options::OptionKeys::chemically_conjugated_docking::UBQpdb

extern

Referenced by UBQ_E2Mover::init_on_new_input(), UBQ_GTPase_disulfide_Mover::init_on_new_input(), and main().