basic::options::OptionKeys::mh::harvest Namespace Reference

Variables
BooleanOptionKey const	harvest
RealOptionKey const	hash_cart_resl
RealOptionKey const	hash_angle_resl
RealOptionKey const	smoothing_factor
BooleanOptionKey const	idealize
BooleanOptionKey const	dump
RealOptionKey const	min_bin_val
BooleanOptionKey const	sep_aa
BooleanOptionKey const	sep_aa1
BooleanOptionKey const	sep_aa2
BooleanOptionKey const	sep_ss
BooleanOptionKey const	sep_dssp
RealVectorOptionKey const	sep_lj
RealVectorOptionKey const	sep_hb
RealVectorOptionKey const	sep_nbrs
RealVectorOptionKey const	sep_bfac
RealVectorOptionKey const	sep_dist
BooleanOptionKey const	weight_by_energy
RealOptionKey const	max_rmsd
IntegerOptionKey const	max_res
BooleanOptionKey const	agg_with_max
RealOptionKey const	multiplier

Variable Documentation

agg_with_max

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::agg_with_max

extern

Referenced by harvest_scores(), and sicdock_thread_num().

dump

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::dump

extern

Referenced by harvest_motifs_one(), harvest_scores(), and sicdock_thread_num().

harvest

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::harvest

extern

hash_angle_resl

RealOptionKey const basic::options::OptionKeys::mh::harvest::hash_angle_resl

extern

Referenced by harvest_scores(), print_scores(), and sicdock_thread_num().

hash_cart_resl

RealOptionKey const basic::options::OptionKeys::mh::harvest::hash_cart_resl

extern

Referenced by harvest_scores(), print_scores(), and sicdock_thread_num().

idealize

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::idealize

extern

Referenced by main(), and sicdock_thread_num().

max_res

IntegerOptionKey const basic::options::OptionKeys::mh::harvest::max_res

extern

Referenced by calculate_helical_parameters_helper(), constraint_set_slice(), harvest_motifs(), main(), rebuild_centroid_test(), register_options(), and sicdock_thread_num().

max_rmsd

RealOptionKey const basic::options::OptionKeys::mh::harvest::max_rmsd

extern

Referenced by sicdock_thread_num().

min_bin_val

RealOptionKey const basic::options::OptionKeys::mh::harvest::min_bin_val

extern

Referenced by harvest_scores(), and sicdock_thread_num().

multiplier

RealOptionKey const basic::options::OptionKeys::mh::harvest::multiplier

extern

Referenced by harvest_scores(), sicdock_thread_num(), and torsion2id().

sep_aa

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::sep_aa

extern

sep_aa1

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::sep_aa1

extern

sep_aa2

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::sep_aa2

extern

sep_bfac

RealVectorOptionKey const basic::options::OptionKeys::mh::harvest::sep_bfac

extern

sep_dist

RealVectorOptionKey const basic::options::OptionKeys::mh::harvest::sep_dist

extern

sep_dssp

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::sep_dssp

extern

sep_hb

RealVectorOptionKey const basic::options::OptionKeys::mh::harvest::sep_hb

extern

sep_lj

RealVectorOptionKey const basic::options::OptionKeys::mh::harvest::sep_lj

extern

sep_nbrs

RealVectorOptionKey const basic::options::OptionKeys::mh::harvest::sep_nbrs

extern

sep_ss

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::sep_ss

extern

Referenced by main().

smoothing_factor

RealOptionKey const basic::options::OptionKeys::mh::harvest::smoothing_factor

extern

Referenced by harvest_scores(), and sicdock_thread_num().

weight_by_energy

BooleanOptionKey const basic::options::OptionKeys::mh::harvest::weight_by_energy

extern

Referenced by harvest_scores(), and sicdock_thread_num().