basic::options::OptionKeys::evaluation Namespace Reference

Variables
BooleanOptionKey const	evaluation
FileVectorOptionKey const	rmsd_target
StringVectorOptionKey const	rmsd_column
FileVectorOptionKey const	rmsd_select
FileVectorOptionKey const	align_rmsd_target
FileVectorOptionKey const	structural_similarity
BooleanOptionKey const	contact_map
StringVectorOptionKey const	jscore_evaluator
StringVectorOptionKey const	align_rmsd_column
FileVectorOptionKey const	align_rmsd_fns
StringOptionKey const	align_rmsd_format
StringOptionKey const	rms_type
StringOptionKey const	predicted_burial_fn
FileOptionKey const	pool
FileVectorOptionKey const	rmsd
FileVectorOptionKey const	chirmsd
BooleanOptionKey const	gdtmm
BooleanOptionKey const	gdttm
BooleanOptionKey const	score_with_rmsd
FileVectorOptionKey const	constraints
FileVectorOptionKey const	constraints_column
FileVectorOptionKey const	combined_constraints
FileVectorOptionKey const	combined_constraints_column
IntegerOptionKey const	combine_statistics
StringVectorOptionKey const	chemical_shifts
StringOptionKey const	sparta_dir
StringVectorOptionKey const	cam_shifts
StringVectorOptionKey const	pales
FileVectorOptionKey const	extra_score
FileVectorOptionKey const	extra_score_patch
StringVectorOptionKey const	extra_score_column
FileVectorOptionKey const	extra_score_select
FileVectorOptionKey const	rdc_target
BooleanOptionKey const	symmetric_rmsd
StringVectorOptionKey const	rdc_column
StringVectorOptionKey const	rdc
StringOptionKey const	built_in_rdc
BooleanOptionKey const	jump_nr
IntegerVectorOptionKey const	score_exclude_res
IntegerOptionKey const	score_sscore_short_helix
IntegerOptionKey const	score_sscore_maxloop
IntegerOptionKey const	window_size
StringOptionKey const	I_sc
BooleanOptionKey const	Irms
BooleanOptionKey const	Ca_Irms
BooleanOptionKey const	Fnat
BooleanOptionKey const	Lrmsd
BooleanOptionKey const	Fnonnat
BooleanOptionKey const	DockMetrics

Variable Documentation

align_rmsd_column

StringVectorOptionKey const basic::options::OptionKeys::evaluation::align_rmsd_column

extern

align_rmsd_fns

FileVectorOptionKey const basic::options::OptionKeys::evaluation::align_rmsd_fns

extern

align_rmsd_format

StringOptionKey const basic::options::OptionKeys::evaluation::align_rmsd_format

extern

align_rmsd_target

FileVectorOptionKey const basic::options::OptionKeys::evaluation::align_rmsd_target

extern

built_in_rdc

StringOptionKey const basic::options::OptionKeys::evaluation::built_in_rdc

extern

Ca_Irms

BooleanOptionKey const basic::options::OptionKeys::evaluation::Ca_Irms

extern

cam_shifts

StringVectorOptionKey const basic::options::OptionKeys::evaluation::cam_shifts

extern

chemical_shifts

StringVectorOptionKey const basic::options::OptionKeys::evaluation::chemical_shifts

extern

chirmsd

FileVectorOptionKey const basic::options::OptionKeys::evaluation::chirmsd

extern

combine_statistics

IntegerOptionKey const basic::options::OptionKeys::evaluation::combine_statistics

extern

combined_constraints

FileVectorOptionKey const basic::options::OptionKeys::evaluation::combined_constraints

extern

combined_constraints_column

FileVectorOptionKey const basic::options::OptionKeys::evaluation::combined_constraints_column

extern

constraints

FileVectorOptionKey const basic::options::OptionKeys::evaluation::constraints

extern

constraints_column

FileVectorOptionKey const basic::options::OptionKeys::evaluation::constraints_column

extern

contact_map

BooleanOptionKey const basic::options::OptionKeys::evaluation::contact_map

extern

Referenced by calc_contacts().

DockMetrics

BooleanOptionKey const basic::options::OptionKeys::evaluation::DockMetrics

extern

evaluation

BooleanOptionKey const basic::options::OptionKeys::evaluation::evaluation

extern

extra_score

FileVectorOptionKey const basic::options::OptionKeys::evaluation::extra_score

extern

extra_score_column

StringVectorOptionKey const basic::options::OptionKeys::evaluation::extra_score_column

extern

extra_score_patch

FileVectorOptionKey const basic::options::OptionKeys::evaluation::extra_score_patch

extern

extra_score_select

FileVectorOptionKey const basic::options::OptionKeys::evaluation::extra_score_select

extern

Fnat

BooleanOptionKey const basic::options::OptionKeys::evaluation::Fnat

extern

Fnonnat

BooleanOptionKey const basic::options::OptionKeys::evaluation::Fnonnat

extern

gdtmm

BooleanOptionKey const basic::options::OptionKeys::evaluation::gdtmm

extern

gdttm

BooleanOptionKey const basic::options::OptionKeys::evaluation::gdttm

extern

Referenced by RescoreCenrot::apply().

I_sc

StringOptionKey const basic::options::OptionKeys::evaluation::I_sc

extern

Irms

BooleanOptionKey const basic::options::OptionKeys::evaluation::Irms

extern

jscore_evaluator

StringVectorOptionKey const basic::options::OptionKeys::evaluation::jscore_evaluator

extern

jump_nr

BooleanOptionKey const basic::options::OptionKeys::evaluation::jump_nr

extern

Lrmsd

BooleanOptionKey const basic::options::OptionKeys::evaluation::Lrmsd

extern

pales

StringVectorOptionKey const basic::options::OptionKeys::evaluation::pales

extern

pool

FileOptionKey const basic::options::OptionKeys::evaluation::pool

extern

predicted_burial_fn

StringOptionKey const basic::options::OptionKeys::evaluation::predicted_burial_fn

extern

rdc

StringVectorOptionKey const basic::options::OptionKeys::evaluation::rdc

extern

Referenced by RDCToolMover::apply(), main(), MyScoreMover::MyScoreMover(), and score_clustered_frags().

rdc_column

StringVectorOptionKey const basic::options::OptionKeys::evaluation::rdc_column

extern

rdc_target

FileVectorOptionKey const basic::options::OptionKeys::evaluation::rdc_target

extern

rms_type

StringOptionKey const basic::options::OptionKeys::evaluation::rms_type

extern

rmsd

FileVectorOptionKey const basic::options::OptionKeys::evaluation::rmsd

extern

rmsd_column

StringVectorOptionKey const basic::options::OptionKeys::evaluation::rmsd_column

extern

rmsd_select

FileVectorOptionKey const basic::options::OptionKeys::evaluation::rmsd_select

extern

rmsd_target

FileVectorOptionKey const basic::options::OptionKeys::evaluation::rmsd_target

extern

score_exclude_res

IntegerVectorOptionKey const basic::options::OptionKeys::evaluation::score_exclude_res

extern

score_sscore_maxloop

IntegerOptionKey const basic::options::OptionKeys::evaluation::score_sscore_maxloop

extern

score_sscore_short_helix

IntegerOptionKey const basic::options::OptionKeys::evaluation::score_sscore_short_helix

extern

score_with_rmsd

BooleanOptionKey const basic::options::OptionKeys::evaluation::score_with_rmsd

extern

sparta_dir

StringOptionKey const basic::options::OptionKeys::evaluation::sparta_dir

extern

structural_similarity

FileVectorOptionKey const basic::options::OptionKeys::evaluation::structural_similarity

extern

symmetric_rmsd

BooleanOptionKey const basic::options::OptionKeys::evaluation::symmetric_rmsd

extern

window_size

IntegerOptionKey const basic::options::OptionKeys::evaluation::window_size

extern

Referenced by main().