basic::options::OptionKeys::recces Namespace Reference

Namespaces
	base_pair
	thermal_sampling

Variables
StringOptionKey const	seq1
StringOptionKey const	seq2
IntegerOptionKey const	n_cycle
RealOptionKey const	a_form_range
BooleanOptionKey const	dump_pdb
BooleanOptionKey const	dump_silent
BooleanOptionKey const	out_torsions
RealVectorOptionKey const	temps
RealVectorOptionKey const	st_weights
BooleanOptionKey const	save_score_terms
StringOptionKey const	out_prefix
IntegerOptionKey const	dump_freq
IntegerOptionKey const	n_intermediate_dump
BooleanOptionKey const	output_min_pose
BooleanOptionKey const	accept_no_op_moves
RealOptionKey const	histogram_min
RealOptionKey const	histogram_max
RealOptionKey const	histogram_spacing

Variable Documentation

a_form_range

RealOptionKey const basic::options::OptionKeys::recces::a_form_range

extern

accept_no_op_moves

BooleanOptionKey const basic::options::OptionKeys::recces::accept_no_op_moves

extern

dump_freq

IntegerOptionKey const basic::options::OptionKeys::recces::dump_freq

extern

Referenced by main().

dump_pdb

BooleanOptionKey const basic::options::OptionKeys::recces::dump_pdb

extern

dump_silent

BooleanOptionKey const basic::options::OptionKeys::recces::dump_silent

extern

Referenced by main().

histogram_max

RealOptionKey const basic::options::OptionKeys::recces::histogram_max

extern

histogram_min

RealOptionKey const basic::options::OptionKeys::recces::histogram_min

extern

histogram_spacing

RealOptionKey const basic::options::OptionKeys::recces::histogram_spacing

extern

n_cycle

IntegerOptionKey const basic::options::OptionKeys::recces::n_cycle

extern

Referenced by double_helix_test(), helix_ST(), main(), and MC_run().

n_intermediate_dump

IntegerOptionKey const basic::options::OptionKeys::recces::n_intermediate_dump

extern

out_prefix

StringOptionKey const basic::options::OptionKeys::recces::out_prefix

extern

Referenced by extract_pdbs_test(), main(), make_mutation_tag(), MC_run(), nucleobase_probe_score_test(), and rb_entropy_test().

out_torsions

BooleanOptionKey const basic::options::OptionKeys::recces::out_torsions

extern

Referenced by main().

output_min_pose

BooleanOptionKey const basic::options::OptionKeys::recces::output_min_pose

extern

Referenced by main(), and MC_run().

save_score_terms

BooleanOptionKey const basic::options::OptionKeys::recces::save_score_terms

extern

Referenced by main(), and MC_run().

seq1

StringOptionKey const basic::options::OptionKeys::recces::seq1

extern

Referenced by DetectSymmetry::apply(), complex_interface_optimize::apply(), compute_Irmsd::apply(), bp_score_calibrate(), build_on_helix(), byres_analysis(), doit(), hessian_estimate(), main(), MC_run(), print_matrix_to_file(), rna_build_helix_test_precompute(), run_pep_prep(), RMS_ScoringScheme::score(), setup_pose(), and torsion2pdb().

seq2

StringOptionKey const basic::options::OptionKeys::recces::seq2

extern

Referenced by complex_interface_optimize::apply(), compute_Irmsd::apply(), bp_score_calibrate(), byres_analysis(), doit(), hessian_estimate(), main(), MC_run(), print_matrix_to_file(), rna_build_helix_test_precompute(), run_pep_prep(), RMS_ScoringScheme::score(), setup_pose(), and torsion2pdb().

st_weights

RealVectorOptionKey const basic::options::OptionKeys::recces::st_weights

extern

Referenced by main().

temps

RealVectorOptionKey const basic::options::OptionKeys::recces::temps

extern

Referenced by doit(), main(), and core::pack::annealer::FixbbSimAnnealer::run().