Rosetta
Variables
basic::options::OptionKeys::trRosetta Namespace Reference

Variables

BooleanOptionKey const trRosetta
 
FileOptionKey const msa_file
 
StringOptionKey const write_constraints_to_file
 
BooleanOptionKey const only_write_constraints
 
BooleanOptionKey const use_distance_constraints
 
BooleanOptionKey const use_omega_constraints
 
BooleanOptionKey const use_theta_constraints
 
BooleanOptionKey const use_phi_constraints
 
RealOptionKey const distance_constraint_prob_cutoff
 
RealOptionKey const omega_constraint_prob_cutoff
 
RealOptionKey const theta_constraint_prob_cutoff
 
RealOptionKey const phi_constraint_prob_cutoff
 
StringOptionKey const backbone_randomization_mode
 
StringOptionKey const backbone_minimization_mode
 
RealOptionKey const cis_peptide_prob_non_prepro
 
RealOptionKey const cis_peptide_prob_prepro
 
FileOptionKey const scorefxn0
 
FileOptionKey const scorefxn1
 
FileOptionKey const scorefxn2
 
FileOptionKey const scorefxn3
 
FileOptionKey const scorefxn_fullatom
 
BooleanOptionKey const mutate_gly_to_ala
 
BooleanOptionKey const fullatom_refinement
 
RealOptionKey const distance_constraint_weight
 
RealOptionKey const phi_constraint_weight
 
RealOptionKey const omega_constraint_weight
 
RealOptionKey const theta_constraint_weight
 

Variable Documentation

◆ backbone_minimization_mode

StringOptionKey const basic::options::OptionKeys::trRosetta::backbone_minimization_mode
extern

◆ backbone_randomization_mode

StringOptionKey const basic::options::OptionKeys::trRosetta::backbone_randomization_mode
extern

◆ cis_peptide_prob_non_prepro

RealOptionKey const basic::options::OptionKeys::trRosetta::cis_peptide_prob_non_prepro
extern

◆ cis_peptide_prob_prepro

RealOptionKey const basic::options::OptionKeys::trRosetta::cis_peptide_prob_prepro
extern

◆ distance_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::distance_constraint_prob_cutoff
extern

◆ distance_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::distance_constraint_weight
extern

◆ fullatom_refinement

BooleanOptionKey const basic::options::OptionKeys::trRosetta::fullatom_refinement
extern

◆ msa_file

FileOptionKey const basic::options::OptionKeys::trRosetta::msa_file
extern

Referenced by main(), and register_options().

◆ mutate_gly_to_ala

BooleanOptionKey const basic::options::OptionKeys::trRosetta::mutate_gly_to_ala
extern

◆ omega_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::omega_constraint_prob_cutoff
extern

◆ omega_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::omega_constraint_weight
extern

◆ only_write_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::only_write_constraints
extern

◆ phi_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::phi_constraint_prob_cutoff
extern

◆ phi_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::phi_constraint_weight
extern

◆ scorefxn0

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn0
extern

Referenced by CenRelaxMover::apply().

◆ scorefxn1

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn1
extern

Referenced by CenRelaxMover::apply().

◆ scorefxn2

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn2
extern

Referenced by main(), and test_scorefxn_io().

◆ scorefxn3

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn3
extern

◆ scorefxn_fullatom

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn_fullatom
extern

◆ theta_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::theta_constraint_prob_cutoff
extern

◆ theta_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::theta_constraint_weight
extern

◆ trRosetta

BooleanOptionKey const basic::options::OptionKeys::trRosetta::trRosetta
extern

◆ use_distance_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_distance_constraints
extern

◆ use_omega_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_omega_constraints
extern

◆ use_phi_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_phi_constraints
extern

◆ use_theta_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_theta_constraints
extern

◆ write_constraints_to_file

StringOptionKey const basic::options::OptionKeys::trRosetta::write_constraints_to_file
extern