basic::options::OptionKeys::trRosetta Namespace Reference

Variables
BooleanOptionKey const	trRosetta
FileOptionKey const	msa_file
StringOptionKey const	write_constraints_to_file
BooleanOptionKey const	only_write_constraints
BooleanOptionKey const	use_distance_constraints
BooleanOptionKey const	use_omega_constraints
BooleanOptionKey const	use_theta_constraints
BooleanOptionKey const	use_phi_constraints
RealOptionKey const	distance_constraint_prob_cutoff
RealOptionKey const	omega_constraint_prob_cutoff
RealOptionKey const	theta_constraint_prob_cutoff
RealOptionKey const	phi_constraint_prob_cutoff
StringOptionKey const	backbone_randomization_mode
StringOptionKey const	backbone_minimization_mode
RealOptionKey const	cis_peptide_prob_non_prepro
RealOptionKey const	cis_peptide_prob_prepro
FileOptionKey const	scorefxn0
FileOptionKey const	scorefxn1
FileOptionKey const	scorefxn2
FileOptionKey const	scorefxn3
FileOptionKey const	scorefxn_fullatom
BooleanOptionKey const	mutate_gly_to_ala
BooleanOptionKey const	fullatom_refinement
RealOptionKey const	distance_constraint_weight
RealOptionKey const	phi_constraint_weight
RealOptionKey const	omega_constraint_weight
RealOptionKey const	theta_constraint_weight

Variable Documentation

backbone_minimization_mode

StringOptionKey const basic::options::OptionKeys::trRosetta::backbone_minimization_mode

extern

backbone_randomization_mode

StringOptionKey const basic::options::OptionKeys::trRosetta::backbone_randomization_mode

extern

cis_peptide_prob_non_prepro

RealOptionKey const basic::options::OptionKeys::trRosetta::cis_peptide_prob_non_prepro

extern

cis_peptide_prob_prepro

RealOptionKey const basic::options::OptionKeys::trRosetta::cis_peptide_prob_prepro

extern

distance_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::distance_constraint_prob_cutoff

extern

distance_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::distance_constraint_weight

extern

fullatom_refinement

BooleanOptionKey const basic::options::OptionKeys::trRosetta::fullatom_refinement

extern

msa_file

FileOptionKey const basic::options::OptionKeys::trRosetta::msa_file

extern

Referenced by main(), and register_options().

mutate_gly_to_ala

BooleanOptionKey const basic::options::OptionKeys::trRosetta::mutate_gly_to_ala

extern

omega_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::omega_constraint_prob_cutoff

extern

omega_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::omega_constraint_weight

extern

only_write_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::only_write_constraints

extern

phi_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::phi_constraint_prob_cutoff

extern

phi_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::phi_constraint_weight

extern

scorefxn0

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn0

extern

Referenced by CenRelaxMover::apply().

scorefxn1

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn1

extern

Referenced by CenRelaxMover::apply().

scorefxn2

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn2

extern

Referenced by main(), and test_scorefxn_io().

scorefxn3

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn3

extern

scorefxn_fullatom

FileOptionKey const basic::options::OptionKeys::trRosetta::scorefxn_fullatom

extern

theta_constraint_prob_cutoff

RealOptionKey const basic::options::OptionKeys::trRosetta::theta_constraint_prob_cutoff

extern

theta_constraint_weight

RealOptionKey const basic::options::OptionKeys::trRosetta::theta_constraint_weight

extern

trRosetta

BooleanOptionKey const basic::options::OptionKeys::trRosetta::trRosetta

extern

use_distance_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_distance_constraints

extern

use_omega_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_omega_constraints

extern

use_phi_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_phi_constraints

extern

use_theta_constraints

BooleanOptionKey const basic::options::OptionKeys::trRosetta::use_theta_constraints

extern

write_constraints_to_file

StringOptionKey const basic::options::OptionKeys::trRosetta::write_constraints_to_file

extern