basic::options::OptionKeys::AnchoredDesign Namespace Reference

Namespaces
	akash
	filters
	testing

Variables
BooleanOptionKey const	AnchoredDesign
FileOptionKey const	anchor
BooleanOptionKey const	allow_anchor_repack
BooleanOptionKey const	vary_cutpoints
BooleanOptionKey const	no_frags
BooleanOptionKey const	debug
BooleanOptionKey const	show_extended
BooleanOptionKey const	refine_only
BooleanOptionKey const	perturb_show
IntegerOptionKey const	perturb_cycles
RealOptionKey const	perturb_temp
BooleanOptionKey const	perturb_CCD_off
BooleanOptionKey const	perturb_KIC_off
BooleanOptionKey const	refine_CCD_off
BooleanOptionKey const	refine_KIC_off
IntegerOptionKey const	refine_cycles
RealOptionKey const	refine_temp
IntegerOptionKey const	refine_repack_cycles
BooleanOptionKey const	rmsd
BooleanOptionKey const	unbound_mode
RealOptionKey const	chainbreak_weight

Variable Documentation

allow_anchor_repack

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::allow_anchor_repack

extern

anchor

FileOptionKey const basic::options::OptionKeys::AnchoredDesign::anchor

extern

Referenced by addcc(), Link::align_c(), Link::align_n(), SwapElementsMover1::apply(), SwapElementsMover2::apply(), MPFindInterfaceTestMover::apply(), MPFoldingMover::apply(), get_sasa(), main(), make_symm_data(), and set_chain_end_fold_tree().

AnchoredDesign

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::AnchoredDesign

extern

chainbreak_weight

RealOptionKey const basic::options::OptionKeys::AnchoredDesign::chainbreak_weight

extern

debug

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::debug

extern

no_frags

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::no_frags

extern

perturb_CCD_off

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::perturb_CCD_off

extern

perturb_cycles

IntegerOptionKey const basic::options::OptionKeys::AnchoredDesign::perturb_cycles

extern

Referenced by FloppyTailMover::apply().

perturb_KIC_off

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::perturb_KIC_off

extern

perturb_show

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::perturb_show

extern

Referenced by FloppyTailMover::apply().

perturb_temp

RealOptionKey const basic::options::OptionKeys::AnchoredDesign::perturb_temp

extern

Referenced by FloppyTailMover::apply().

refine_CCD_off

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::refine_CCD_off

extern

refine_cycles

IntegerOptionKey const basic::options::OptionKeys::AnchoredDesign::refine_cycles

extern

Referenced by FloppyTailMover::apply(), UBQ_E2Mover::apply(), and UBQ_GTPase_disulfide_Mover::apply().

refine_KIC_off

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::refine_KIC_off

extern

refine_only

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::refine_only

extern

refine_repack_cycles

IntegerOptionKey const basic::options::OptionKeys::AnchoredDesign::refine_repack_cycles

extern

Referenced by FloppyTailMover::apply(), UBQ_E2Mover::apply(), and UBQ_GTPase_disulfide_Mover::apply().

refine_temp

RealOptionKey const basic::options::OptionKeys::AnchoredDesign::refine_temp

extern

Referenced by FloppyTailMover::apply(), UBQ_E2Mover::apply(), and UBQ_GTPase_disulfide_Mover::apply().

rmsd

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::rmsd

extern

show_extended

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::show_extended

extern

unbound_mode

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::unbound_mode

extern

vary_cutpoints

BooleanOptionKey const basic::options::OptionKeys::AnchoredDesign::vary_cutpoints

extern