basic::options::OptionKeys::contactMap Namespace Reference

Variables
BooleanOptionKey const	contactMap
StringOptionKey const	prefix
RealOptionKey const	distance_cutoff
StringOptionKey const	region_def
BooleanOptionKey const	row_format
BooleanOptionKey const	distance_matrix

Variable Documentation

contactMap

BooleanOptionKey const basic::options::OptionKeys::contactMap::contactMap

extern

distance_cutoff

RealOptionKey const basic::options::OptionKeys::contactMap::distance_cutoff

extern

Referenced by xtal_water_bunsat::atomid_is_contacting_crystallographic_water(), main(), and processRegions().

distance_matrix

BooleanOptionKey const basic::options::OptionKeys::contactMap::distance_matrix

extern

Referenced by numeric::AgglomerativeHierarchicalClusterer::cluster(), numeric::SingleLinkClusterer::comparator(), numeric::AverageLinkClusterer::comparator(), numeric::CompleteLinkClusterer::comparator(), and processRegions().

prefix

StringOptionKey const basic::options::OptionKeys::contactMap::prefix

extern

Referenced by processRegions().

region_def

StringOptionKey const basic::options::OptionKeys::contactMap::region_def

extern

Referenced by processRegions().

row_format

BooleanOptionKey const basic::options::OptionKeys::contactMap::row_format

extern

Referenced by processRegions().