setup_for_complex_scoring_general.py File Reference

Namespaces
	setup_for_complex_scoring_general

Functions
def	setup_for_complex_scoring_general.main ()
def	setup_for_complex_scoring_general.get_mut_string (seq)
	Some helper functions #######. More...
def	setup_for_complex_scoring_general.check_nostruct_matches (sequence)
def	setup_for_complex_scoring_general.list_NC_BPs (bps, seq)
def	setup_for_complex_scoring_general.list_mutated_BPs (bps, seq)
def	setup_for_complex_scoring_general.list_NC_BPs_noGU (bps, seq)
def	setup_for_complex_scoring_general.find_offset (ss)
def	setup_for_complex_scoring_general.find_pairs (secstruct)
def	setup_for_complex_scoring_general.get_ss (seq)

Variables
string	setup_for_complex_scoring_general.wt_ss = '(((((.((....)))))))'
string	setup_for_complex_scoring_general.wt_seq = 'acaugaggaucacccaugu'
	setup_for_complex_scoring_general.parser = argparse.ArgumentParser(description="Set up ddg calculations for list of RNP mutants")
	setup_for_complex_scoring_general.action
	setup_for_complex_scoring_general.default
	setup_for_complex_scoring_general.False
	setup_for_complex_scoring_general.help
	setup_for_complex_scoring_general.dest
	setup_for_complex_scoring_general.rebuild_surrounding
	setup_for_complex_scoring_general.type
	setup_for_complex_scoring_general.str
	setup_for_complex_scoring_general.int
	setup_for_complex_scoring_general.args = parser.parse_args()