basic::options::OptionKeys::carbohydrates::glycopeptide_docking Namespace Reference

Variables
BooleanOptionKey const	glycopeptide_docking
StringOptionKey const	residue_to_glycosylate
StringOptionKey const	anchor_residue
BooleanOptionKey const	low_res
IntegerOptionKey const	high_res_outer_cycles
IntegerOptionKey const	low_res_outer_cycles
IntegerOptionKey const	low_res_inner_cycles
BooleanOptionKey const	high_res
StringOptionKey const	substrate_type
StringOptionKey const	tree_type
BooleanOptionKey const	randomize_substrate_torsions
BooleanOptionKey const	enable_backbone_moves_pp
BooleanOptionKey const	prevent_anchor_repacking
StringOptionKey const	sugardonor_residue
BooleanOptionKey const	output_debug_pdbs
BooleanOptionKey const	fix_weights
StringOptionKey const	nevery_interface
StringOptionKey const	ntotal_backbone
BooleanOptionKey const	allow_glycan_torsion_moves
RealOptionKey const	interface_distance
BooleanOptionKey const	score_only
BooleanOptionKey const	output_distance_metrics
StringOptionKey const	preglycosylate_residues
StringOptionKey const	preglycosylate_sugar_names

Variable Documentation

allow_glycan_torsion_moves

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::allow_glycan_torsion_moves

extern

anchor_residue

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::anchor_residue

extern

enable_backbone_moves_pp

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::enable_backbone_moves_pp

extern

fix_weights

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::fix_weights

extern

glycopeptide_docking

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::glycopeptide_docking

extern

high_res

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::high_res

extern

high_res_outer_cycles

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::high_res_outer_cycles

extern

interface_distance

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::interface_distance

extern

Referenced by protocols::antibody::design::AntibodyDesignMoverGenerator::interface_detection_dis().

low_res

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::low_res

extern

Referenced by check_structures(), and main().

low_res_inner_cycles

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::low_res_inner_cycles

extern

low_res_outer_cycles

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::low_res_outer_cycles

extern

nevery_interface

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::nevery_interface

extern

ntotal_backbone

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::ntotal_backbone

extern

output_debug_pdbs

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::output_debug_pdbs

extern

output_distance_metrics

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::output_distance_metrics

extern

preglycosylate_residues

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::preglycosylate_residues

extern

preglycosylate_sugar_names

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::preglycosylate_sugar_names

extern

prevent_anchor_repacking

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::prevent_anchor_repacking

extern

randomize_substrate_torsions

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::randomize_substrate_torsions

extern

residue_to_glycosylate

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::residue_to_glycosylate

extern

score_only

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::score_only

extern

Referenced by cst_relax_test(), and main().

substrate_type

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::substrate_type

extern

sugardonor_residue

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::sugardonor_residue

extern

tree_type

StringOptionKey const basic::options::OptionKeys::carbohydrates::glycopeptide_docking::tree_type

extern