test.T300_PyJobDistributor.TestPyJobDistributor Class Reference

Inheritance diagram for test.T300_PyJobDistributor.TestPyJobDistributor:

Public Member Functions
def	setUpClass (cls)
def	tearDownClass (cls)
def	test_jd (self)
def	test_jd_at (self)
def	test_jd_serializable_scores (self)
def	test_jd_unserializable_scores (self)

Public Attributes
	pose
	sf
	workdir

Member Function Documentation

setUpClass()

def test.T300_PyJobDistributor.TestPyJobDistributor.setUpClass

(

cls

)

References pyrosetta.init().

tearDownClass()

def test.T300_PyJobDistributor.TestPyJobDistributor.tearDownClass

(

cls

)

References pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.

test_jd()

def test.T300_PyJobDistributor.TestPyJobDistributor.test_jd

(

self

)

References clone(), ObjexxFCL.len(), PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, test.T300_PyJobDistributor.TestPyJobDistributor.pose, and test.T300_PyJobDistributor.TestPyJobDistributor.sf.

test_jd_at()

def test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_at

(

self

)

References clone(), ObjexxFCL.len(), PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, test.T300_PyJobDistributor.TestPyJobDistributor.pose, and test.T300_PyJobDistributor.TestPyJobDistributor.sf.

test_jd_serializable_scores()

def test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_serializable_scores

(

self

)

References clone(), pyrosetta.tests.distributed.test_dask.format, basic::database.open(), PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, test.T300_PyJobDistributor.TestPyJobDistributor.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), test.T300_PyJobDistributor.TestPyJobDistributor.sf, pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.

test_jd_unserializable_scores()

def test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_unserializable_scores

(

self

)

References clone(), pyrosetta.tests.distributed.test_dask.format, basic::database.open(), PDB_IOBenchmark.pose, ScoreBenchmark.pose, ShearMoverBenchmark.pose, SmallMoverBenchmark.pose, SamplingManager.pose, apps::pilot::KicSandbox.pose, PoseAndData.pose, PoseWrap.pose, MatchBase.pose, MatchLig.pose, SlideTask.pose(), HIT.pose, WorkDat.pose, pyrosetta.bindings.pose.PoseResidueAccessor.pose, pyrosetta.bindings.pose.PoseResidueLabelAccessor.pose, pyrosetta.bindings.pose.PoseScoreAccessor.pose, pyrosetta.bindings.scores.base.PoseCacheAccessorBase.pose, pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.pose, test.T010_LoadPDB.LoadPDBTest.pose, test.T300_PyJobDistributor.TestPyJobDistributor.pose, ui::ui_core::pose_draw::SimplePoseDrawOpenGLWidget.pose(), pyrosetta.distributed.packed_pose.core.PackedPose.pose(), test.T300_PyJobDistributor.TestPyJobDistributor.sf, pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.

Member Data Documentation

pose

test.T300_PyJobDistributor.TestPyJobDistributor.pose

Referenced by pyrosetta.bindings.pose.PoseScoreAccessor.__delitem__(), pyrosetta.bindings.scores.core.PoseCacheAccessor.__delitem__(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__delitem__(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessorBase.__delitem__(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricStringDataAccessor.__delitem__(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricRealDataAccessor.__delitem__(), pyrosetta.bindings.pose.PoseResidueAccessor.__getitem__(), pyrosetta.bindings.pose.PoseResidueLabelAccessor.__getitem__(), pyrosetta.bindings.pose.PoseResidueAccessor.__iadd__(), pyrosetta.bindings.pose.PoseResidueAccessor.__imul__(), pyrosetta.bindings.pose.PoseResidueAccessor.__iter__(), pyrosetta.bindings.pose.PoseResidueAccessor.__len__(), pyrosetta.bindings.pose.PoseResidueLabelAccessor.__len__(), pyrosetta.bindings.pose.PoseResidueLabelAccessor.__repr__(), pyrosetta.bindings.pose.PoseResidueAccessor.__reversed__(), pyrosetta.bindings.pose.PoseScoreAccessor.__setitem__(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.__setitem__(), pyrosetta.bindings.scores.base.PoseCacheAccessorBase._get_sm_data_dict(), pyrosetta.bindings.scores.base.PoseCacheAccessorBase._has_reserved_custom_metric_keys(), pyrosetta.bindings.scores.base.PoseCacheAccessorBase._maybe_delete_keys_from_sm_data(), pyrosetta.bindings.scores.base.PoseCacheAccessorBase._maybe_delete_reserved_keys_from_sm_data(), pyrosetta.bindings.pose.PoseScoreAccessor.all(), pyrosetta.bindings.scores.energies.EnergiesAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraFloatScoresDataAccessor.all(), pyrosetta.bindings.scores.extra_scores.ExtraStringScoresDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricCompositeStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricCompositeRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueStringDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueRealDataAccessor.all(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricPerResidueProbabilitiesDataAccessor.all(), pyrosetta.bindings.scores.base.PoseCacheAccessorBase.apply(), pyrosetta.bindings.pose.PoseScoreAccessor.clear(), pyrosetta.bindings.scores.core.PoseCacheAccessor.clear(), pyrosetta.bindings.scores.energies.EnergiesAccessor.clear(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessorBase.clear(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor.clear(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.clear(), pyrosetta.distributed.packed_pose.core.PackedPose.clone(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.composite_real(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.composite_string(), pyrosetta.distributed.packed_pose.core.PackedPose.empty(), pyrosetta.bindings.pose.PoseScoreAccessor.energies(), pyrosetta.bindings.scores.core.PoseCacheAccessor.energies(), pyrosetta.bindings.pose.PoseScoreAccessor.extra(), pyrosetta.bindings.scores.core.PoseCacheAccessor.extra(), pyrosetta.bindings.scores.core.PoseCacheAccessor.metrics(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.per_residue_probabilities(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.per_residue_real(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.per_residue_string(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor.real(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.real(), pyrosetta.bindings.scores.extra_scores.ExtraScoresAccessor.string(), pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessor.string(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_at(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_serializable_scores(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_unserializable_scores(), test.T010_LoadPDB.LoadPDBTest.test_pdbstring_io(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.test_pose_cache(), test.T010_LoadPDB.LoadPDBTest.test_roundtrip_file(), test.T010_LoadPDB.LoadPDBTest.test_roundtrip_pdb(), test.T010_LoadPDB.LoadPDBTest.test_roundtrip_scored_pdb(), and pyrosetta.distributed.packed_pose.core.PackedPose.update_scores().

sf

test.T300_PyJobDistributor.TestPyJobDistributor.sf

Referenced by test.T300_PyJobDistributor.TestPyJobDistributor.test_jd(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_at(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_serializable_scores(), and test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_unserializable_scores().

workdir

test.T300_PyJobDistributor.TestPyJobDistributor.workdir

Referenced by pyrosetta.tests.distributed.cluster.test_smoke.TestBase.tearDown(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.tearDownClass(), pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.tearDownClass(), test.T010_LoadPDB.LoadPDBTest.tearDownClass(), test.T300_PyJobDistributor.TestPyJobDistributor.tearDownClass(), pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.test_detached_scores(), pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.test_detached_scores_in_protocol(), pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.test_detached_scores_with_reserve_scores(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_builtin_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_multi_user_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_partition_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_user_client(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_serializable_scores(), test.T300_PyJobDistributor.TestPyJobDistributor.test_jd_unserializable_scores(), test.T010_LoadPDB.LoadPDBTest.test_roundtrip_file(), test.T010_LoadPDB.LoadPDBTest.test_roundtrip_pdb(), and test.T010_LoadPDB.LoadPDBTest.test_roundtrip_scored_pdb().

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The documentation for this class was generated from the following file:

• src/python/PyRosetta/src/test/T300_PyJobDistributor.py