protocols::antibody::task_operations::AddFrameworkProfilesOperation Class Reference

Add Framework Profiles as the task operation for a framework chain. See protocols/task_operations/ResidueProbTaskOperation for more. More...

#include <AddFrameworkProfilesOperation.hh>

Inheritance diagram for protocols::antibody::task_operations::AddFrameworkProfilesOperation:

Public Member Functions
	AddFrameworkProfilesOperation ()
	AddFrameworkProfilesOperation (AntibodyInfoCOP ab_info)
	AddFrameworkProfilesOperation (AntibodyInfoCOP ab_info, bool use_conservative_set)
virtual	~AddFrameworkProfilesOperation ()
	AddFrameworkProfilesOperation (AddFrameworkProfilesOperation const &src)
virtual void	apply (core::pose::Pose const &pose, core::pack::task::PackerTask &task) const
void	set_use_conservative_set (bool use_conservatives)
	Use the set of conservative mutations instead of profiles. More...

Private Attributes
AntibodyInfoCOP	ab_info_
core::Size	picking_rounds_
bool	add_to_current_
bool	use_native_type_
bool	use_conservative_set_
AntibodyNumberingSchemeEnum	numbering_scheme_
	Needed for default and RS constructor. More...
CDRDefinitionEnum	cdr_definition_

Detailed Description

Add Framework Profiles as the task operation for a framework chain. See protocols/task_operations/ResidueProbTaskOperation for more.

Constructor & Destructor Documentation

AddFrameworkProfilesOperation() [1/4]

protocols::antibody::task_operations::AddFrameworkProfilesOperation::AddFrameworkProfilesOperation

(

)

AddFrameworkProfilesOperation() [2/4]

protocols::antibody::task_operations::AddFrameworkProfilesOperation::AddFrameworkProfilesOperation

(

AntibodyInfoCOP

ab_info

)

AddFrameworkProfilesOperation() [3/4]

protocols::antibody::task_operations::AddFrameworkProfilesOperation::AddFrameworkProfilesOperation	(	AntibodyInfoCOP	ab_info,
		bool	use_conservative_set
	)

~AddFrameworkProfilesOperation()

protocols::antibody::task_operations::AddFrameworkProfilesOperation::~AddFrameworkProfilesOperation ( )

virtual

AddFrameworkProfilesOperation() [4/4]

protocols::antibody::task_operations::AddFrameworkProfilesOperation::AddFrameworkProfilesOperation

(

AddFrameworkProfilesOperation const &

src

)

Member Function Documentation

apply()

virtual void protocols::antibody::task_operations::AddFrameworkProfilesOperation::apply ( core::pose::Pose const &  pose, core::pack::task::PackerTask &  task  ) const

virtual

Referenced by pyrosetta.bindings.scores.simple_metrics.SimpleMetricDataAccessorBase::__setitem__(), pyrosetta.bindings.scores.base.PoseCacheAccessorBase::_maybe_delete_keys_from_sm_data(), and pyrosetta.distributed.tasks.rosetta_scripts.BaseRosettaScriptsTask::execute().

set_use_conservative_set()

void protocols::antibody::task_operations::AddFrameworkProfilesOperation::set_use_conservative_set

(

bool

use_conservatives

)

Use the set of conservative mutations instead of profiles.

Member Data Documentation

ab_info_

AntibodyInfoCOP protocols::antibody::task_operations::AddFrameworkProfilesOperation::ab_info_

private

add_to_current_

bool protocols::antibody::task_operations::AddFrameworkProfilesOperation::add_to_current_

private

cdr_definition_

CDRDefinitionEnum protocols::antibody::task_operations::AddFrameworkProfilesOperation::cdr_definition_

private

numbering_scheme_

AntibodyNumberingSchemeEnum protocols::antibody::task_operations::AddFrameworkProfilesOperation::numbering_scheme_

private

Needed for default and RS constructor.

picking_rounds_

core::Size protocols::antibody::task_operations::AddFrameworkProfilesOperation::picking_rounds_

private

use_conservative_set_

bool protocols::antibody::task_operations::AddFrameworkProfilesOperation::use_conservative_set_

private

use_native_type_

bool protocols::antibody::task_operations::AddFrameworkProfilesOperation::use_native_type_

private

---

The documentation for this class was generated from the following files:

• src/apps/pilot/jadolfbr/AddFrameworkProfilesOperation.hh
• src/apps/pilot/jadolfbr/AddFrameworkProfilesOperation.cc