basic::options::OptionKeys::carbohydrates::glycan_dock Namespace Reference

Variables
BooleanOptionKey const	glycan_dock
IntegerOptionKey const	n_repeats
BooleanOptionKey const	refine_only
BooleanOptionKey const	prepack_only
BooleanOptionKey const	rand_glycan_jump_res
BooleanOptionKey const	stage1_rotate_glycan_about_com
RealOptionKey const	stage1_perturb_glycan_com_trans_mag
RealOptionKey const	stage1_perturb_glycan_com_rot_mag
RealOptionKey const	stage1_torsion_uniform_pert_mag
RealOptionKey const	mc_kt
IntegerOptionKey const	n_rigid_body_rounds
BooleanOptionKey const	slide_glycan_into_contact
RealOptionKey const	stage2_trans_mag
RealOptionKey const	stage2_rot_mag
IntegerOptionKey const	n_torsion_rounds
IntegerOptionKey const	full_packing_frequency
RealOptionKey const	interface_packing_distance
BooleanOptionKey const	ramp_scorefxn
BooleanOptionKey const	watch_in_pymol

Variable Documentation

full_packing_frequency

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::full_packing_frequency

extern

glycan_dock

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::glycan_dock

extern

Referenced by carbohydrates::glycan_dock::full_packing_frequency(), carbohydrates::glycan_dock::interface_packing_distance(), main(), carbohydrates::glycan_dock::ramp_scorefxn(), and carbohydrates::glycan_dock::watch_in_pymol().

interface_packing_distance

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::interface_packing_distance

extern

mc_kt

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::mc_kt

extern

n_repeats

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::n_repeats

extern

n_rigid_body_rounds

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::n_rigid_body_rounds

extern

n_torsion_rounds

IntegerOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::n_torsion_rounds

extern

prepack_only

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::prepack_only

extern

ramp_scorefxn

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::ramp_scorefxn

extern

rand_glycan_jump_res

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::rand_glycan_jump_res

extern

refine_only

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::refine_only

extern

slide_glycan_into_contact

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::slide_glycan_into_contact

extern

stage1_perturb_glycan_com_rot_mag

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::stage1_perturb_glycan_com_rot_mag

extern

stage1_perturb_glycan_com_trans_mag

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::stage1_perturb_glycan_com_trans_mag

extern

stage1_rotate_glycan_about_com

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::stage1_rotate_glycan_about_com

extern

stage1_torsion_uniform_pert_mag

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::stage1_torsion_uniform_pert_mag

extern

stage2_rot_mag

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::stage2_rot_mag

extern

stage2_trans_mag

RealOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::stage2_trans_mag

extern

watch_in_pymol

BooleanOptionKey const basic::options::OptionKeys::carbohydrates::glycan_dock::watch_in_pymol

extern