utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT > Class Template Reference

A mpiper ostream. More...

#include <mpistream.hh>

Inheritance diagram for utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >:

Public Types
typedef basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >	mpi_ostreambase_type
typedef std::basic_ostream< Elem, Tr >	ostream_type
typedef std::basic_ostream< Elem, Tr > &	ostream_reference
typedef Elem	char_type
Public Types inherited from utility::io::mpi_stream::basic_mpi_ostreambase< Elem, std::char_traits< Elem >, std::allocator< Elem >, unsigned char, std::allocator< unsigned char > >
typedef std::basic_ostream< Elem, std::char_traits< Elem > > &	ostream_reference
typedef basic_mpi_streambuf< Elem, std::char_traits< Elem >, std::allocator< Elem >, unsigned char, std::allocator< unsigned char > >	mpi_streambuf_type

Public Member Functions
	basic_mpi_ostream (std::string filename, int master_rank, std::stringstream &header, bool append=false, std::size_t buffer_size_=default_buffer_size)
	Constructs a mpiper ostream decorator. More...
void	close ()
	~basic_mpi_ostream () override
template<typename T >
basic_mpi_ostream &	operator<< (T const &t)
	stream output More...
basic_mpi_ostream &	put (char const c)
	write char More...
basic_mpi_ostream &	write (char const *str, std::streamsize const count)
	write a string More...
basic_mpi_ostream &	flush ()
mpi_streambuf_type *	rdbuf ()
	returns the underlying mpi ostream object More...
Public Member Functions inherited from utility::io::mpi_stream::basic_mpi_ostreambase< Elem, std::char_traits< Elem >, std::allocator< Elem >, unsigned char, std::allocator< unsigned char > >
	basic_mpi_ostreambase (std::string filename, size_t buffer_size_, int master_rank, bool append)
	Construct a mpi stream. More...
mpi_streambuf_type *	rdbuf ()
	returns the underlying mpi ostream object More...
int	file_status () const
void	release_file ()
void	print_header (std::string const &header)

Static Private Member Functions
static void	put_long_as_uint32 (ostream_reference out_, unsigned long x_)

Private Attributes
bool	m_mpi_stream_finalized
	tracks to see if mpi stream was finalized More...

Detailed Description

template<typename Elem, typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>
class utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >

A mpiper ostream.

Remarks

This class is a ostream decorator that behaves 'almost' like any other ostream.

At construction, it takes any ostream that shall be used to output of the compressed data.

When finished, you need to call the special method zflush or call the destructor to flush all the intermidiate streams.

Example:

// creating the target mpi string, could be a fstream
ostringstream ostringstream_;
// creating the mpi layer
mpi_ostream mpiper(ostringstream_);
 
 
// writing data
mpiper<<f<<" "<<d<<" "<<ui<<" "<<ul<<" "<<us<<" "<<c<<" "<<dum;
// mpi ostream needs special flushing...
mpiper.zflush();

Member Typedef Documentation

char_type

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

typedef Elem utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::char_type

mpi_ostreambase_type

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

typedef basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT > utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::mpi_ostreambase_type

ostream_reference

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

typedef std::basic_ostream< Elem, Tr >& utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::ostream_reference

ostream_type

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

typedef std::basic_ostream< Elem, Tr > utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::ostream_type

Constructor & Destructor Documentation

basic_mpi_ostream()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::basic_mpi_ostream ( std::string  filename, int  master_rank, std::stringstream &  header, bool  append = false, std::size_t  buffer_size_ = default_buffer_size  )

inline

Constructs a mpiper ostream decorator.

Parameters

ostream_	ostream where the compressed output is written
is_gmpi_	true if gmpi header and footer have to be added
level_	level of compression 0, bad and fast, 9, good and slower,
strategy_	compression strategy
window_size_	see zlib doc
memory_level_	see zlib doc
buffer_size_	the buffer size used to mpi data

Note

When is_gmpi_ is true, a gmpi header and footer is automatically added

References utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >::file_status(), header(), utility::io::mpi_stream::MPI_FAIL, utility::io::mpi_stream::MPI_SUCCESS_NEW, and utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >::print_header().

~basic_mpi_ostream()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::~basic_mpi_ostream ( )

inlineoverride

Member Function Documentation

close()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

void utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::close ( )

inline

Referenced by pyrosetta.distributed.utility.log.LoggingContext::__exit__(), ez_setup.ContextualZipFile::__exit__(), PyMOL-Rosetta-relay-client.SecretInputDialog::__init__(), utility::io::ozstream::close(), and PyMOL-Rosetta-relay-client.SecretInputDialog::start_server().

flush()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

basic_mpi_ostream& utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::flush ( )

inline

References utility::io::mpi_stream::basic_mpi_streambuf< Elem, Tr, ElemA, ByteT, ByteAT >::flush(), and utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::rdbuf().

Referenced by utility::io::ozstream::flush(), and utility::io::ozstream::flush_finalize().

operator<<()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

template<typename T >

basic_mpi_ostream& utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::operator<< ( T const &  t )

inline

stream output

if mpi stream has been finalized, will reset

the stream and add header if necessary

References predPRE::t.

put()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

basic_mpi_ostream& utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::put ( char const  c )

inline

write char

if mpi stream has been finalized, will reset

the stream and add header if necessary

References kmeans_adaptive_kernel_density_bb_dependent_rotlib::c, and utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::put().

Referenced by utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::put(), and utility::io::ozstream::put().

put_long_as_uint32()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

void utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::put_long_as_uint32 ( ostream_reference  out_, unsigned long  x_  )

staticprivate

References docking::b1, docking::b2, docking::b3, and utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::write().

rdbuf()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

mpi_streambuf_type* utility::io::mpi_stream::basic_mpi_ostreambase< Elem, Tr, ElemA, ByteT, ByteAT >::rdbuf

inline

returns the underlying mpi ostream object

Referenced by utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::flush().

write()

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

basic_mpi_ostream& utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::write ( char const *  str, std::streamsize const  count  )

inline

write a string

if mpi stream has been finalized, will reset

the stream and add header if necessary

References count, str(), and utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::write().

Referenced by utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::put_long_as_uint32(), utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::write(), and utility::io::ozstream::write().

Member Data Documentation

m_mpi_stream_finalized

template<typename Elem , typename Tr = std::char_traits< Elem >, typename ElemA = std::allocator< Elem >, typename ByteT = unsigned char, typename ByteAT = std::allocator< ByteT >>

bool utility::io::mpi_stream::basic_mpi_ostream< Elem, Tr, ElemA, ByteT, ByteAT >::m_mpi_stream_finalized

private

tracks to see if mpi stream was finalized

set to true during zflush_finalize()

set to false during reset_state()

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The documentation for this class was generated from the following files:

• src/utility/io/mpistream.hh
• src/utility/io/mpistream.ipp