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Rosetta
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Public Member Functions | |
| def | get_protocols (cls) |
| def | test_generate_builtin_clients (self) |
| def | test_generate_user_client (self) |
| def | test_generate_multi_user_clients (self) |
| def | test_generate_partition_clients (self) |
Public Member Functions inherited from pyrosetta.tests.distributed.cluster.test_smoke.TestBase | |
| def | setUpClass (cls) |
| def | tearDownClass (cls) |
| def | setUp (self) |
| def | tearDown (self) |
Static Public Member Functions | |
| def | parameter_to_str (parameter) |
| def | create_tasks (parameter) |
| def | my_pyrosetta_protocol_1 (packed_pose, **kwargs) |
| def | my_pyrosetta_protocol_2 (packed_pose, **kwargs) |
Static Private Attributes | |
| int | _n_tasks = 2 |
| int | _n_output_packed_poses = 2 |
| tuple | _parameters = (0.0, 100.0) |
| dictionary | _pyrosetta_kwargs |
Additional Inherited Members | |
Public Attributes inherited from pyrosetta.tests.distributed.cluster.test_smoke.TestBase | |
| input_packed_pose | |
| local_directory | |
| local_directory_1 | |
| local_directory_2 | |
| default_client | |
| clients | |
| workdir | |
| instance_kwargs | |
Smoke test for the use case of the `PyRosettaCluster().generate()` method.
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References range.
Referenced by pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_builtin_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_multi_user_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_partition_clients(), and pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_user_client().
| def pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.get_protocols | ( | cls | ) |
References pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.my_pyrosetta_protocol_1(), and pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.my_pyrosetta_protocol_2().
Referenced by pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_builtin_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_multi_user_clients(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_partition_clients(), and pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_user_client().
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References basic::options::OptionKeys::in::file.list, and range.
Referenced by pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.get_protocols().
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| def pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_builtin_clients | ( | self | ) |
Test for `PyRosettaCluster().generate()` using built-in client instantiations.
References pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.create_tasks(), filter, ObjexxFCL.get(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.get_protocols(), pyrosetta.distributed.cluster.core.PyRosettaCluster.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.instance_kwargs, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.instance_kwargs, pyrosetta.distributed.cluster.tools.iterate(), ObjexxFCL.len(), basic::options::OptionKeys::in::file.list, pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.parameter_to_str(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.
| def pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_multi_user_clients | ( | self | ) |
Test for `PyRosettaCluster().generate()` with `save_all=True`, `dry_run=True`, and using multiple user-provided clients.
References pyrosetta.distributed.cluster.core.PyRosettaCluster.clients, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.clients, ui::network::B.clients, pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.create_tasks(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.get_protocols(), pyrosetta.distributed.cluster.core.PyRosettaCluster.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.instance_kwargs, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.instance_kwargs, pyrosetta.distributed.cluster.tools.iterate(), ObjexxFCL.len(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.
| def pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_partition_clients | ( | self | ) |
Test for `PyRosettaCluster().generate()` with `save_all=True`, `dry_run=True`, and partitioning user-provided clients over iterations.
References pyrosetta.distributed.cluster.core.PyRosettaCluster.clients, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.clients, ui::network::B.clients, pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.create_tasks(), pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.get_protocols(), pyrosetta.distributed.cluster.core.PyRosettaCluster.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.instance_kwargs, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.instance_kwargs, pyrosetta.distributed.cluster.tools.iterate(), ObjexxFCL.len(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.
| def pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.test_generate_user_client | ( | self | ) |
Test for `PyRosettaCluster().generate()` with `save_all=True`, `dry_run=True`, and using a user-provided client.
References pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.create_tasks(), pyrosetta.tests.distributed.cluster.test_smoke.TestBase.default_client, pyrosetta.tests.distributed.cluster.test_smoke.GeneratorTest.get_protocols(), pyrosetta.distributed.cluster.core.PyRosettaCluster.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.input_packed_pose, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.instance_kwargs, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.instance_kwargs, pyrosetta.distributed.cluster.tools.iterate(), ObjexxFCL.len(), pyrosetta.tests.bindings.core.test_pose.TestPoseCacheAccessor.workdir, pyrosetta.tests.distributed.cluster.test_smoke.ScoresTest.workdir, pyrosetta.tests.distributed.cluster.test_smoke.TestBase.workdir, test.T010_LoadPDB.LoadPDBTest.workdir, and test.T300_PyJobDistributor.TestPyJobDistributor.workdir.
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