old → numeric Relation

File in src/apps/pilot/will/old	Includes file in src/numeric
atom_design.cc	random / random.hh
atom_design.cc	xyz.functions.hh
atom_design.cc	xyz.io.hh
bpy.cc	random / random.hh
bpy.cc	model_quality / rms.hh
bpy.cc	xyz.functions.hh
bpy.cc	xyz.io.hh
coiled_coil.cc	random / random.hh
coiled_coil.cc	model_quality / rms.hh
coiled_coil.cc	xyz.functions.hh
coiled_coil.cc	xyz.io.hh
coiled_coil_zn.cc	random / random.hh
coiled_coil_zn.cc	model_quality / rms.hh
coiled_coil_zn.cc	xyz.functions.hh
coiled_coil_zn.cc	xyz.io.hh
crossmatch.cc	NumericTraits.hh
crossmatch.cc	random / random.hh
crossmatch.cc	model_quality / rms.hh
crossmatch.cc	xyz.functions.hh
crossmatch.cc	xyz.io.hh
crossmatch_3e.cc	random / random.hh
crossmatch_3e.cc	model_quality / rms.hh
crossmatch_3e.cc	xyz.functions.hh
crossmatch_3e.cc	xyz.io.hh
crossmatch_d2.cc	NumericTraits.hh
crossmatch_d2.cc	random / random.hh
crossmatch_d2.cc	model_quality / rms.hh
crossmatch_d2.cc	xyz.functions.hh
crossmatch_d2.cc	xyz.io.hh
CXdock.cc	conversions.hh
CXdock.cc	random / random.hh
CXdock.cc	model_quality / rms.hh
CXdock.cc	xyz.functions.hh
CXdock.cc	xyz.io.hh
CXdock.cc	xyzTransform.hh
CXdock.cc	xyzVector.hh
cxdock_sheet.cc	conversions.hh
cxdock_sheet.cc	random / random.hh
cxdock_sheet.cc	model_quality / rms.hh
cxdock_sheet.cc	xyz.functions.hh
cxdock_sheet.cc	xyz.io.hh
CXdock_TMP.cc	conversions.hh
CXdock_TMP.cc	random / random.hh
CXdock_TMP.cc	model_quality / rms.hh
CXdock_TMP.cc	xyz.functions.hh
CXdock_TMP.cc	xyz.io.hh
cycgly_bbg8t3a.cc	random / random.hh
cycgly_bbg8t3a.cc	xyz.functions.hh
cycgly_bbg8t3a.cc	xyz.io.hh
cycgly_canonical.cc	random / random.hh
cycgly_canonical.cc	xyz.functions.hh
cycgly_canonical.cc	xyz.io.hh
cycgly_superimpose.cc	random / random.hh
cycgly_superimpose.cc	xyz.functions.hh
cycgly_superimpose.cc	xyz.io.hh
cycgly_target.cc	random / random.hh
cycgly_target.cc	xyz.functions.hh
cycgly_target.cc	xyz.io.hh
cycsamp.cc	random / random.hh
cycsamp.cc	xyz.functions.hh
cycsamp.cc	xyz.io.hh
d3_bpy_linker.cc	conversions.hh
d3_bpy_linker.cc	random / random.hh
d3_bpy_linker.cc	model_quality / rms.hh
d3_bpy_linker.cc	xyz.functions.hh
d3_bpy_linker.cc	xyz.io.hh
d3_bpy_linker.cc	xyzVector.hh
design_DL.cc	conversions.hh
design_DL.cc	random / random.hh
design_DL.cc	xyz.functions.hh
design_DL.cc	xyz.io.hh
design_frags.cc	xyz.functions.hh
design_frags.cc	xyzMatrix.hh
design_frags.cc	xyzVector.hh
designability_stats.cc	conversions.hh
designability_stats.cc	random / random.hh
designability_stats.cc	model_quality / rms.hh
designability_stats.cc	xyz.functions.hh
designability_stats.cc	xyz.io.hh
disulf_frag_match.cc	xyz.functions.hh
disulf_frag_match.cc	xyz.io.hh
disulf_frag_search.cc	xyz.functions.hh
disulf_frag_search.cc	xyz.io.hh
disulf_stat.cc	xyz.functions.hh
disulf_stat.cc	xyz.io.hh
dock_asym.cc	conversions.hh
dock_asym.cc	random / random.hh
dock_asym.cc	model_quality / rms.hh
dock_asym.cc	xyz.functions.hh
dock_asym.cc	xyz.io.hh
dubois.cc	random / random.hh
dubois.cc	model_quality / rms.hh
dubois.cc	xyz.functions.hh
dubois.cc	xyz.io.hh
dubois_graft.cc	random / random.hh
dubois_graft.cc	model_quality / rms.hh
dubois_graft.cc	xyz.functions.hh
dubois_graft.cc	xyz.io.hh
dump_res.cc	random / random.hh
dump_res.cc	model_quality / rms.hh
dump_res.cc	xyz.functions.hh
dump_res.cc	xyz.io.hh
dxdock.cc	conversions.hh
dxdock.cc	random / random.hh
dxdock.cc	model_quality / rms.hh
dxdock.cc	xyz.functions.hh
dxdock.cc	xyz.io.hh
dxdock_movie.cc	conversions.hh
dxdock_movie.cc	random / random.hh
dxdock_movie.cc	model_quality / rms.hh
dxdock_movie.cc	xyz.functions.hh
dxdock_movie.cc	xyz.io.hh
dxdock_movie.cc	xyzTransform.hh
dxdock_movie.cc	xyzVector.hh
flail.cc	random / random.hh
flail.cc	xyz.functions.hh
flail.cc	xyzTransform.io.hh
fnd_dutton.cc	xyz.functions.hh
fnd_dutton.cc	xyz.io.hh
for_tim.cc	xyzTransform.hh
FunGroupTK.cc	constants.hh
FunGroupTK.cc	random / random.hh
FunGroupTK.cc	xyz.functions.hh
FunGroupTK.cc	xyz.io.hh
FunGroupTK_test.cc	xyz.functions.hh
FunGroupTK_test.cc	xyz.io.hh
gen3bpy.cc	conversions.hh
gen3bpy.cc	random / random.hh
gen3bpy.cc	xyz.functions.hh
gen3bpy.cc	xyz.io.hh
gen_cyc_gly.cc	random / random.hh
gen_cyc_gly.cc	xyz.functions.hh
gen_cyc_gly.cc	xyz.io.hh
gen_cyc_gly_cst.cc	NumericTraits.hh
gen_cyc_gly_cst.cc	random / random.hh
gen_cyc_gly_cst.cc	xyz.functions.hh
gen_cyc_gly_cst.cc	xyz.io.hh
gen_d2.cc	kinematic_closure / bridgeObjects.hh
gen_d2.cc	random / random.hh
gen_d2.cc	xyz.functions.hh
gen_d2.cc	xyz.io.hh
gen_d2_3his_ooc.cc	kinematic_closure / bridgeObjects.hh
gen_d2_3his_ooc.cc	kinematic_closure / kinematic_closure_helpers.hh
gen_d2_3his_ooc.cc	random / random.hh
gen_d2_3his_ooc.cc	model_quality / rms.hh
gen_d2_3his_ooc.cc	xyz.functions.hh
gen_d2_3his_ooc.cc	xyz.io.hh
gen_d2_4his.cc	kinematic_closure / bridgeObjects.hh
gen_d2_4his.cc	random / random.hh
gen_d2_4his.cc	xyz.functions.hh
gen_d2_4his.cc	xyz.io.hh
gen_d2_hhhc.cc	kinematic_closure / bridgeObjects.hh
gen_d2_hhhc.cc	random / random.hh
gen_d2_hhhc.cc	xyz.functions.hh
gen_d2_hhhc.cc	xyz.io.hh
gen_disulf_homodimer.cc	NumericTraits.hh
gen_disulf_homodimer.cc	random / random.hh
gen_disulf_homodimer.cc	xyz.functions.hh
gen_disulf_homodimer.cc	xyz.io.hh
gen_homo_hc.cc	kinematic_closure / bridgeObjects.hh
gen_homo_hc.cc	random / random.hh
gen_homo_hc.cc	xyz.functions.hh
gen_homo_hc.cc	xyz.io.hh
gen_trimer_disulf.cc	conversions.hh
gen_trimer_disulf.cc	random / random.hh
gen_trimer_disulf.cc	xyz.functions.hh
gen_trimer_disulf.cc	xyz.io.hh
gen_xtal_dimer_from_trimer.cc	conversions.hh
gen_xtal_dimer_from_trimer.cc	random / random.hh
gen_xtal_dimer_from_trimer.cc	xyz.functions.hh
gen_xtal_dimer_from_trimer.cc	xyz.io.hh
genI213.cc	conversions.hh
genI213.cc	random / random.hh
genI213.cc	xyz.functions.hh
genI213.cc	xyz.io.hh
genI213_2comp.cc	conversions.hh
genI213_2comp.cc	random / random.hh
genI213_2comp.cc	xyz.functions.hh
genI213_2comp.cc	xyz.io.hh
genI213_2dsf.cc	conversions.hh
genI213_2dsf.cc	random / random.hh
genI213_2dsf.cc	xyz.functions.hh
genI213_2dsf.cc	xyz.io.hh
genI213_gensym.cc	conversions.hh
genI213_gensym.cc	random / random.hh
genI213_gensym.cc	model_quality / rms.hh
genI213_gensym.cc	xyz.functions.hh
genI213_gensym.cc	xyz.io.hh
genI213_nocontacts.cc	conversions.hh
genI213_nocontacts.cc	random / random.hh
genI213_nocontacts.cc	xyz.functions.hh
genI213_nocontacts.cc	xyz.io.hh
genmatch.cc	random / random.hh
genmatch.cc	model_quality / rms.hh
genmatch.cc	xyz.functions.hh
genmatch.cc	xyz.io.hh
genmatch_3bpy.cc	conversions.hh
genmatch_3bpy.cc	random / random.hh
genmatch_3bpy.cc	model_quality / rms.hh
genmatch_3bpy.cc	xyz.functions.hh
genmatch_3bpy.cc	xyz.io.hh
genmatch_d6_bhhcg.cc	random / random.hh
genmatch_d6_bhhcg.cc	model_quality / rms.hh
genmatch_d6_bhhcg.cc	xyz.functions.hh
genmatch_d6_bhhcg.cc	xyz.io.hh
genmatch_d6_bpy.cc	xyz.functions.hh
genmatch_d6_bpy.cc	xyz.io.hh
genmatch_m8.cc	random / random.hh
genmatch_m8.cc	model_quality / rms.hh
genmatch_m8.cc	xyz.functions.hh
genmatch_m8.cc	xyz.io.hh
genP23.cc	conversions.hh
genP23.cc	random / random.hh
genP23.cc	model_quality / rms.hh
genP23.cc	xyz.functions.hh
genP23.cc	xyz.io.hh
gensym_3bpy_from_dimer.cc	conversions.hh
gensym_3bpy_from_dimer.cc	random / random.hh
gensym_3bpy_from_dimer.cc	model_quality / rms.hh
gensym_3bpy_from_dimer.cc	xyz.functions.hh
gensym_3bpy_from_dimer.cc	xyz.io.hh
gentetra.cc	conversions.hh
gentetra.cc	random / random.hh
gentetra.cc	model_quality / rms.hh
gentetra.cc	xyz.functions.hh
gentetra.cc	xyz.io.hh
gentetra_bpy_from_znhis.cc	conversions.hh
gentetra_bpy_from_znhis.cc	random / random.hh
gentetra_bpy_from_znhis.cc	xyz.functions.hh
gentetra_bpy_from_znhis.cc	xyz.io.hh
gentetra_from_trimer.cc	conversions.hh
gentetra_from_trimer.cc	random / random.hh
gentetra_from_trimer.cc	xyz.functions.hh
gentetra_from_trimer.cc	xyz.io.hh
getDistConstraints.cc	random / random.hh
getDistConstraints.cc	model_quality / rms.hh
gpu / gpu_cbdock.cc	conversions.hh
gpu / gpu_cbdock.cc	random / random.hh
gpu / gpu_cbdock.cc	model_quality / rms.hh
gpu / gpu_cbdock.cc	xyz.functions.hh
gpu / gpu_cbdock.cc	xyz.io.hh
gpu / gpu_linker.cc	conversions.hh
gpu / gpu_linker.cc	random / random.hh
gpu / gpu_linker.cc	model_quality / rms.hh
gpu / gpu_linker.cc	xyz.functions.hh
gpu / gpu_linker.cc	xyz.io.hh
gpu / gpu_mat_vec.hh	IOTraits.hh
gpu / gpu_refold.hh	xyz.io.hh
gpu / gpu_score.cc	conversions.hh
gpu / gpu_score.cc	random / random.hh
gpu / gpu_score.cc	model_quality / rms.hh
gpu / gpu_score.cc	xyz.functions.hh
gpu / gpu_score.cc	xyz.io.hh
gpu / gpu_test.cc	conversions.hh
gpu / gpu_test.cc	random / random.hh
gpu / gpu_test.cc	model_quality / rms.hh
gpu / gpu_test.cc	xyz.functions.hh
gpu / gpu_test.cc	xyz.io.hh
gpu / gpu_test_Mxform.cc	conversions.hh
gpu / gpu_test_Mxform.cc	random / random.hh
gpu / gpu_test_Mxform.cc	model_quality / rms.hh
gpu / gpu_test_Mxform.cc	xyz.functions.hh
gpu / gpu_test_Mxform.cc	xyz.io.hh
hczndimer.cc	conversions.hh
hczndimer.cc	random / random.hh
hczndimer.cc	model_quality / rms.hh
hczndimer.cc	xyz.functions.hh
hczndimer.cc	xyz.io.hh
helix_assembly.cc	conversions.hh
helix_assembly.cc	random / random.hh
helix_assembly.cc	model_quality / rms.hh
helix_assembly.cc	xyz.functions.hh
helix_assembly.cc	xyz.io.hh
helix_assembly.cc	xyzTransform.hh
helix_assembly.cc	xyzVector.hh
heterodock.cc	conversions.hh
heterodock.cc	random / random.hh
heterodock.cc	model_quality / rms.hh
heterodock.cc	xyz.functions.hh
heterodock.cc	xyz.io.hh
heterodock.cc	xyzTransform.hh
heterodock.cc	xyzVector.hh
holes2_training_data.cc	model_quality / rms.hh
holes2_training_data.cc	model_quality / RmsData.hh
holes_pbpdb.cc	random / random.hh
holes_pbpdb.cc	model_quality / rms.hh
hubabinitio.cc	random / random.hh
hubabinitio.cc	model_quality / rms.hh
hubabinitio.cc	xyz.functions.hh
hubabinitio.cc	xyz.io.hh
hubdenovo.cc	random / random.hh
hubdenovo.cc	model_quality / rms.hh
hubdenovo.cc	xyz.functions.hh
hubdenovo.cc	xyz.io.hh
hubfragdesign.cc	random / random.hh
hubfragdesign.cc	model_quality / rms.hh
hubfragdesign.cc	xyz.functions.hh
hubfragdesign.cc	xyz.io.hh
IKFGDB.cc	constants.hh
IKFGDB.cc	random / random.hh
IKFGDB.cc	xyz.functions.hh
IKFGDB.cc	xyz.io.hh
isct_test.cc	constants.hh
isct_test.cc	xyz.functions.hh
isct_test.cc	xyz.io.hh
match_disulf.cc	model_quality / rms.hh
match_disulf.cc	xyzVector.hh
match_disulf.cc	xyzVector.io.hh
minimize.cc	xyz.functions.hh
minimize.cc	xyzMatrix.hh
minimize.cc	xyzVector.hh
minimize_cavities.cc	io.hh
minimize_cavities.cc	xyzVector.hh
mkresfile_i213.cc	random / random.hh
motif_denovo_hb.cc	conversions.hh
motif_denovo_hb.cc	random / random.hh
motif_denovo_hb.cc	model_quality / rms.hh
motif_denovo_hb.cc	xyz.functions.hh
motif_denovo_hb.cc	xyz.io.hh
motif_denovo_hb.cc	xyzVector.hh
motif_hash_util.cc	conversions.hh
motif_hash_util.cc	HomogeneousTransform.hh
motif_hash_util.cc	random / random.hh
motif_hash_util.cc	model_quality / rms.hh
motif_hash_util.cc	geometry / hashing / SixDHasher.hh
motif_hash_util.cc	xyz.functions.hh
motif_hash_util.cc	xyz.io.hh
motif_hash_util.cc	xyzVector.hh
nisod.cc	random / random.hh
nisod.cc	model_quality / rms.hh
nisod.cc	xyz.functions.hh
nisod.cc	xyz.io.hh
organopv.cc	random / random.hh
organopv.cc	model_quality / rms.hh
organopv.cc	xyz.functions.hh
organopv.cc	xyz.io.hh
pack_ddg.cc	random / random.hh
pack_ddg.cc	xyzVector.hh
pentcb.cc	conversions.hh
pentcb.cc	random / random.hh
pentcb.cc	model_quality / rms.hh
pentcb.cc	xyz.functions.hh
pentcb.cc	xyz.io.hh
pentcb_design.cc	conversions.hh
pentcb_design.cc	random / random.hh
pentcb_design.cc	model_quality / rms.hh
pentcb_design.cc	xyz.functions.hh
pentcb_design.cc	xyz.io.hh
pentcb_test.cc	conversions.hh
pentcb_test.cc	random / random.hh
pentcb_test.cc	model_quality / rms.hh
pentcb_test.cc	xyz.functions.hh
pentcb_test.cc	xyz.io.hh
pilot_packstat.cc	NumericTraits.hh
pilot_packstat.cc	random / random.hh
pilot_packstat.cc	xyz.functions.hh
print_dunscores.cc	xyz.functions.hh
print_dunscores.cc	xyz.io.hh
rblinker.cc	random / random.hh
rblinker.cc	xyz.functions.hh
rblinker.cc	xyz.io.hh
rblinker2.cc	random / random.hh
rblinker2.cc	xyz.functions.hh
rblinker2.cc	xyz.io.hh
rblinker2_overlay_bound.cc	random / random.hh
rblinker2_overlay_bound.cc	xyz.functions.hh
rblinker2_overlay_bound.cc	xyz.io.hh
rblinker2_test.cc	random / random.hh
rblinker2_test.cc	xyz.functions.hh
rblinker2_test.cc	xyz.io.hh
rescore_i213.cc	random / random.hh
rsd_canonical_units.cc	conversions.hh
rsd_canonical_units.cc	random / random.hh
rsd_canonical_units.cc	model_quality / rms.hh
rsd_canonical_units.cc	xyz.functions.hh
rsd_canonical_units.cc	xyz.io.hh
sasa_test.cc	random / random.hh
sasa_test.cc	xyz.functions.hh
score_pdbs.cc	random / random.hh
score_pdbs.cc	xyzVector.hh
sf4_hash.cc	random / random.hh
sf4_hash.cc	model_quality / rms.hh
sf4_hash.cc	xyz.functions.hh
sf4_hash.cc	xyz.io.hh
sicdock.cc	conversions.hh
sicdock.cc	random / random.hh
sicdock.cc	model_quality / rms.hh
sicdock.cc	xyz.functions.hh
sicdock.cc	xyz.io.hh
sicdock.cc	xyzTransform.hh
sicdock.cc	xyzVector.hh
smhybrid.cc	random / random.hh
smhybrid.cc	model_quality / rms.hh
smhybrid.cc	xyz.functions.hh
smhybrid.cc	xyz.io.hh
sphere_hierarchy.cc	conversions.hh
sphere_hierarchy.cc	random / random.hh
sphere_hierarchy.cc	model_quality / rms.hh
sphere_hierarchy.cc	xyz.functions.hh
sphere_hierarchy.cc	xyz.io.hh
SphereSample.hh	xyzVector.hh
spiro.cc	random / random.hh
symdock_enum_3_1.cc	constants.hh
symdock_enum_3_1.cc	xyz.functions.hh
symdock_enum_3_1.cc	xyz.io.hh
symdock_enum_3_1.cc	xyzTransform.hh
symdock_hybrid.cc	random / random.hh
symdock_hybrid.cc	xyz.functions.hh
symdock_hybrid.cc	xyz.io.hh
symdock_hybrid_cc3.cc	random / random.hh
symdock_hybrid_cc3.cc	xyz.functions.hh
symdock_hybrid_cc3.cc	xyz.io.hh
tcdock.cc	constants.hh
tcdock.cc	xyz.functions.hh
tcdock.cc	xyz.io.hh
tcdock.cc	xyzTransform.hh
test_ikrs.cc	kinematic_closure / bridgeObjects.hh
test_ikrs.cc	NumericTraits.hh
test_ikrs.cc	xyz.functions.hh
test_ikrs.cc	xyz.io.hh
test_ikrs2.cc	kinematic_closure / bridgeObjects.hh
test_ikrs2.cc	kinematic_closure / kinematic_closure_helpers.hh
test_ikrs2.cc	NumericTraits.hh
test_ikrs2.cc	xyz.functions.hh
test_ikrs2.cc	xyz.io.hh
test_ikrs_flymake.cc	kinematic_closure / bridgeObjects.hh
test_ikrs_flymake.cc	kinematic_closure / kinematic_closure_helpers.hh
test_ikrs_flymake.cc	xyz.functions.hh
test_ikrs_flymake.cc	xyz.io.hh
test_kc.cc	kinematic_closure / bridgeObjects.hh
test_kc.cc	conversions.hh
test_kc.cc	kinematic_closure / kinematic_closure_helpers.hh
test_kc.cc	random / random.hh
test_leerichards.cc	random / random.hh
test_leerichards.cc	xyz.functions.hh
test_leerichards.cc	xyz.io.hh
test_loop_hash.cc	HomogeneousTransform.hh
test_loop_hash.cc	xyz.functions.hh
test_loop_hash.cc	xyz.io.hh
test_rose.cc	random / random.hh
test_rose.cc	xyzTransform.hh
ward_design.cc	random / random.hh
ward_design.cc	model_quality / rms.hh
ward_design.cc	xyz.functions.hh
ward_design.cc	xyz.io.hh
will_mutalyze.cc	random / random.hh
willmatch_2d6_bhe.cc	xyz.functions.hh
willmatch_2d6_bhe.cc	xyz.io.hh
willmatch_chorismate.cc	xyz.functions.hh
willmatch_chorismate.cc	xyz.io.hh
willmatch_d6_bpy.cc	xyz.functions.hh
willmatch_d6_bpy.cc	xyz.io.hh
xyzStripeHash_dump.cc	xyz.io.hh
xyzStripeHash_dump.cc	geometry / hashing / xyzStripeHashWithMeta.hh
xyzStripeHash_dump.cc	xyzVector.hh
xyzStripeHash_test.cc	random / random.hh
xyzStripeHash_test.cc	xyz.io.hh
xyzStripeHash_test.cc	geometry / hashing / xyzStripeHash.hh
xyzStripeHash_test.cc	xyzVector.hh
yeates_align.cc	random / random.hh
yeates_align.cc	xyz.functions.hh
yeates_align.cc	xyz.io.hh
query_lang / metric.cc	random / random.hh