Rosetta
src
apps
pilot
dgront
dgront → basic Relation
File in src/apps/pilot/dgront
Includes file in src/basic
ApplicationContext.cc
options
/
keys
/
abinitio.OptionKeys.gen.hh
ApplicationContext.cc
options
/
after_opts.hh
ApplicationContext.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
ApplicationContext.cc
options
/
keys
/
evaluation.OptionKeys.gen.hh
ApplicationContext.cc
options
/
keys
/
filters.OptionKeys.gen.hh
ApplicationContext.cc
options
/
keys
/
in.OptionKeys.gen.hh
ApplicationContext.cc
options
/
keys
/
james.OptionKeys.gen.hh
ApplicationContext.cc
options
/
keys
/
loops.OptionKeys.gen.hh
ApplicationContext.cc
options
/
option.hh
ApplicationContext.cc
options
/
option_macros.hh
ApplicationContext.cc
options
/
keys
/
out.OptionKeys.gen.hh
ApplicationContext.cc
options
/
keys
/
run.OptionKeys.gen.hh
ApplicationContext.cc
Tracer.hh
CustomAbinitio.cc
options
/
option.hh
CustomAbinitio.cc
options
/
option_macros.hh
CustomAbinitio.cc
options
/
keys
/
OptionKeys.hh
CustomAbinitio.cc
Tracer.hh
DisulfideTest.cc
options
/
keys
/
in.OptionKeys.gen.hh
DisulfideTest.cc
options
/
option.hh
DisulfideTest.cc
options
/
option_macros.hh
DisulfideTest.cc
options
/
keys
/
OptionKeys.hh
DomainAssemblerNDocker.cc
options
/
keys
/
abinitio.OptionKeys.gen.hh
DomainAssemblerNDocker.cc
options
/
keys
/
assembly.OptionKeys.gen.hh
DomainAssemblerNDocker.cc
options
/
keys
/
in.OptionKeys.gen.hh
DomainAssemblerNDocker.cc
options
/
option.hh
DomainAssemblerNDocker.cc
options
/
option_macros.hh
DomainAssemblerNDocker.cc
options
/
keys
/
out.OptionKeys.gen.hh
DomainAssemblerNDocker.cc
options
/
keys
/
score.OptionKeys.gen.hh
DomainAssemblerNDocker.cc
Tracer.hh
Features.cc
Tracer.hh
filters_in_abrelax.cc
Tracer.hh
hierarchical_clustering.cc
options
/
option.hh
hierarchical_clustering.cc
options
/
option_macros.hh
hierarchical_clustering.cc
Tracer.hh
JumpSpecificAbrelax.cc
options
/
keys
/
abinitio.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
options
/
after_opts.hh
JumpSpecificAbrelax.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
options
/
keys
/
filters.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
options
/
keys
/
frags.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
options
/
keys
/
in.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
options
/
keys
/
loops.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
MetricValue.hh
JumpSpecificAbrelax.cc
options
/
option.hh
JumpSpecificAbrelax.cc
options
/
option_macros.hh
JumpSpecificAbrelax.cc
options
/
keys
/
out.OptionKeys.gen.hh
JumpSpecificAbrelax.cc
Tracer.hh
LibraryJumpSetup.cc
Tracer.hh
SaxsSampler.cc
options
/
option.hh
SaxsSampler.cc
options
/
option_macros.hh
SaxsSampler.cc
options
/
keys
/
OptionKeys.hh
SaxsSampler.cc
options
/
keys
/
out.OptionKeys.gen.hh
SpecificJumpSetup.cc
Tracer.hh
tnm_sampler.cc
options
/
keys
/
in.OptionKeys.gen.hh
tnm_sampler.cc
options
/
option.hh
tnm_sampler.cc
options
/
option_macros.hh
tnm_sampler.cc
options
/
keys
/
OptionKeys.hh
tnm_sampler.cc
Tracer.hh
experiments
/
AllCrmsd.cc
options
/
option.hh
experiments
/
AllCrmsd.cc
options
/
keys
/
OptionKeys.hh
experiments
/
AllCrmsd.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
AllCrmsd.cc
options
/
keys
/
out.OptionKeys.gen.hh
experiments
/
AllCrmsd.cc
options
/
keys
/
score.OptionKeys.gen.hh
experiments
/
AllCrmsd.cc
options
/
option_macros.hh
experiments
/
AllCrmsd.cc
Tracer.hh
experiments
/
call_mover.cc
Tracer.hh
experiments
/
call_mover.cc
options
/
option.hh
experiments
/
call_mover.cc
options
/
option_macros.hh
experiments
/
call_mover.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
call_mover.cc
options
/
keys
/
backrub.OptionKeys.gen.hh
experiments
/
call_mover.cc
options
/
keys
/
out.OptionKeys.gen.hh
experiments
/
call_mover.cc
options
/
keys
/
canonical_sampling.OptionKeys.gen.hh
experiments
/
call_rdc.cc
options
/
option_macros.hh
experiments
/
call_rdc.cc
options
/
option.hh
experiments
/
call_rdc.cc
options
/
keys
/
OptionKeys.hh
experiments
/
call_rdc.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
call_rdc.cc
options
/
keys
/
out.OptionKeys.gen.hh
experiments
/
CreatePose.cc
options
/
option.hh
experiments
/
CreatePose.cc
options
/
keys
/
OptionKeys.hh
experiments
/
CreatePose.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
CreatePose.cc
options
/
option_macros.hh
experiments
/
DetailedScores.cc
options
/
option.hh
experiments
/
DetailedScores.cc
options
/
keys
/
OptionKeys.hh
experiments
/
DetailedScores.cc
options
/
option_macros.hh
experiments
/
DetailedScores.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
DisulfideBondEnergy.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
DisulfideBondEnergy.cc
options
/
option.hh
experiments
/
DisulfideBondEnergy.cc
options
/
keys
/
OptionKeys.hh
experiments
/
DisulfideBondEnergy.cc
options
/
option_macros.hh
experiments
/
DumpConstraints.cc
options
/
option.hh
experiments
/
DumpConstraints.cc
options
/
option_macros.hh
experiments
/
DumpConstraints.cc
options
/
keys
/
OptionKeys.hh
experiments
/
DumpConstraints.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
DumpConstraints.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
experiments
/
GunnTest.cc
options
/
option.hh
experiments
/
GunnTest.cc
options
/
option_macros.hh
experiments
/
GunnTest.cc
options
/
keys
/
OptionKeys.hh
experiments
/
GunnTest.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
print_options.cc
options
/
option.hh
experiments
/
print_options.cc
options
/
keys
/
OptionKeys.hh
experiments
/
print_options.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
print_options.cc
options
/
keys
/
frags.OptionKeys.gen.hh
experiments
/
print_options.cc
options
/
keys
/
out.OptionKeys.gen.hh
experiments
/
print_options.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
experiments
/
RDCTest.cc
Tracer.hh
experiments
/
RDCTest.cc
options
/
option.hh
experiments
/
RDCTest.cc
options
/
option_macros.hh
experiments
/
RDCTest.cc
options
/
keys
/
OptionKeys.hh
experiments
/
RDCTest.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
RDCTest.cc
options
/
keys
/
rdc.OptionKeys.gen.hh
experiments
/
read_profile.cc
options
/
option_macros.hh
experiments
/
read_profile.cc
options
/
option.hh
experiments
/
read_profile.cc
options
/
keys
/
OptionKeys.hh
experiments
/
TryScoreFilter.cc
Tracer.hh
experiments
/
TryScoreFilter.cc
options
/
keys
/
out.OptionKeys.gen.hh
experiments
/
TryScoreFilter.cc
options
/
keys
/
abinitio.OptionKeys.gen.hh
experiments
/
TryScoreFilter.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
TryScoreFilter.cc
options
/
keys
/
assembly.OptionKeys.gen.hh
experiments
/
TryScoreFilter.cc
options
/
option.hh
experiments
/
TryScoreFilter.cc
options
/
option_macros.hh
experiments
/
TryScoreFilter.cc
options
/
keys
/
score.OptionKeys.gen.hh
experiments
/
welde_chains.cc
options
/
option_macros.hh
experiments
/
welde_chains.cc
options
/
option.hh
experiments
/
welde_chains.cc
options
/
keys
/
OptionKeys.hh
experiments
/
welde_chains.cc
options
/
keys
/
in.OptionKeys.gen.hh
experiments
/
welde_chains.cc
options
/
keys
/
out.OptionKeys.gen.hh
fragmentpicker
/
diverse_fragments.cc
Tracer.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
Tracer.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
option.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
option_macros.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
keys
/
OptionKeys.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
keys
/
frags.OptionKeys.gen.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
keys
/
in.OptionKeys.gen.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
keys
/
out.OptionKeys.gen.hh
fragmentpicker
/
fragmentpicker_integration_demo.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
fragmentpicker
/
picker.cc
options
/
option.hh
fragmentpicker
/
picker.cc
options
/
option_macros.hh
fragmentpicker
/
picker.cc
options
/
keys
/
OptionKeys.hh
fragmentpicker
/
picker.cc
options
/
keys
/
out.OptionKeys.gen.hh
fragmentpicker
/
picker.cc
options
/
keys
/
frags.OptionKeys.gen.hh
fragmentpicker
/
picker.cc
options
/
keys
/
in.OptionKeys.gen.hh
fragmentpicker
/
picker.cc
options
/
keys
/
rdc.OptionKeys.gen.hh
fragmentpicker
/
picker.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
fragmentpicker
/
picker.cc
prof.hh
fragmentpicker
/
picker.cc
Tracer.hh
fragmentpicker
/
PickSSE.cc
Tracer.hh
fragmentpicker
/
quotapicker_demo.cc
Tracer.hh
fragmentpicker
/
quotapicker_demo.cc
options
/
option.hh
fragmentpicker
/
quotapicker_demo.cc
options
/
option_macros.hh
fragmentpicker
/
quotapicker_demo.cc
options
/
keys
/
OptionKeys.hh
fragmentpicker
/
quotapicker_demo.cc
options
/
keys
/
frags.OptionKeys.gen.hh
fragmentpicker
/
quotapicker_demo.cc
options
/
keys
/
in.OptionKeys.gen.hh
fragmentpicker
/
quotapicker_demo.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
fragmentpicker
/
rescore_fragments.cc
Tracer.hh
fragmentpicker
/
rescore_fragments.cc
options
/
option.hh
fragmentpicker
/
rescore_fragments.cc
options
/
option_macros.hh
fragmentpicker
/
rescore_fragments.cc
options
/
keys
/
OptionKeys.hh
fragmentpicker
/
rescore_fragments.cc
options
/
keys
/
frags.OptionKeys.gen.hh
fragmentpicker
/
rescore_fragments.cc
options
/
keys
/
in.OptionKeys.gen.hh
fragmentpicker
/
rescore_fragments.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
saxs
/
assemble_domains_with_saxs_jd2.cc
Tracer.hh
saxs
/
assemble_domains_with_saxs_jd2.cc
options
/
keys
/
cm.OptionKeys.gen.hh
saxs
/
assemble_domains_with_saxs_jd2.cc
options
/
keys
/
loops.OptionKeys.gen.hh
saxs
/
assemble_domains_with_saxs_jd2.cc
options
/
keys
/
constraints.OptionKeys.gen.hh
saxs
/
assemble_domains_with_saxs_jd2.cc
options
/
option.hh
saxs
/
call_saxs_score.cc
Tracer.hh
saxs
/
call_saxs_score.cc
options
/
keys
/
casp.OptionKeys.gen.hh
saxs
/
call_saxs_score.cc
options
/
keys
/
out.OptionKeys.gen.hh
saxs
/
call_saxs_score.cc
options
/
keys
/
in.OptionKeys.gen.hh
saxs
/
call_saxs_score.cc
options
/
option.hh
saxs
/
call_saxs_score.cc
options
/
option_macros.hh
saxs
/
call_saxs_score.cc
options
/
keys
/
score.OptionKeys.gen.hh
saxs
/
ComputeSAXSSpectrum.cc
options
/
option.hh
saxs
/
ComputeSAXSSpectrum.cc
options
/
keys
/
OptionKeys.hh
saxs
/
ComputeSAXSSpectrum.cc
options
/
keys
/
in.OptionKeys.gen.hh
saxs
/
ComputeSAXSSpectrum.cc
options
/
keys
/
out.OptionKeys.gen.hh
saxs
/
ComputeSAXSSpectrum.cc
options
/
keys
/
score.OptionKeys.gen.hh
saxs
/
ComputeSAXSSpectrum.cc
options
/
option_macros.hh
saxs
/
ComputeSAXSSpectrum.cc
Tracer.hh
saxs
/
linker_sampler.cc
Tracer.hh
saxs
/
linker_sampler.cc
options
/
keys
/
out.OptionKeys.gen.hh
saxs
/
linker_sampler.cc
options
/
keys
/
abinitio.OptionKeys.gen.hh
saxs
/
linker_sampler.cc
options
/
keys
/
in.OptionKeys.gen.hh
saxs
/
linker_sampler.cc
options
/
keys
/
relax.OptionKeys.gen.hh
saxs
/
linker_sampler.cc
options
/
option.hh
saxs
/
linker_sampler.cc
options
/
option_macros.hh
saxs
/
linker_sampler.cc
options
/
keys
/
score.OptionKeys.gen.hh
saxs
/
RescorePDDF.cc
options
/
option.hh
saxs
/
RescorePDDF.cc
options
/
keys
/
OptionKeys.hh
saxs
/
RescorePDDF.cc
options
/
keys
/
in.OptionKeys.gen.hh
saxs
/
RescorePDDF.cc
options
/
keys
/
out.OptionKeys.gen.hh
saxs
/
RescorePDDF.cc
options
/
keys
/
score.OptionKeys.gen.hh
saxs
/
RescorePDDF.cc
options
/
option_macros.hh
saxs
/
RescorePDDF.cc
Tracer.hh
saxs
/
RescoreSAXS.cc
options
/
option.hh
saxs
/
RescoreSAXS.cc
options
/
keys
/
OptionKeys.hh
saxs
/
RescoreSAXS.cc
options
/
keys
/
in.OptionKeys.gen.hh
saxs
/
RescoreSAXS.cc
options
/
keys
/
out.OptionKeys.gen.hh
saxs
/
RescoreSAXS.cc
options
/
keys
/
score.OptionKeys.gen.hh
saxs
/
RescoreSAXS.cc
options
/
option_macros.hh
saxs
/
RescoreSAXS.cc
Tracer.hh
saxs
/
RotateSAXS.cc
Tracer.hh
Generated on Fri Sep 12 2025 00:06:08 for Rosetta by
1.9.1